BDGP Sequence Production Resources |
Search the DGRC for LD15841
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 158 |
Well: | 41 |
Vector: | pBS SK- |
Associated Gene/Transcript | GNBP1-RA |
Protein status: | LD15841.pep: gold |
Preliminary Size: | 1758 |
Sequenced Size: | 1794 |
Gene | Date | Evidence |
---|---|---|
CG6895 | 2007-11-01 | Manual selection by Ken Wan |
GNBP1 | 2008-04-29 | Picked prior to 5.5 |
GNBP1 | 2008-08-15 | Release 5.9 accounting |
GNBP1 | 2008-12-18 | 5.12 accounting |
1794 bp assembled on 2008-05-27
GenBank Submission: BT032835
> LD15841.complete CCAGATCGCAGCCGGAGCTGATATCAACGTGGATTTGCATTCGCCGAATC GCGATTGTCCGGACCAACTTAAAGTAAACAAATAATAGTAATCGCTCCTC ACCAGCGACAGAAACCGGTCTGCCAGTGAGATAGACACACAGATTGAGTC AGAGGCTCGGGATTCTTGTCGAAAAGTGCTGAACTCGAGGATTCAAAATG CCAGGATTGTGCATTGGAATCCTTCTGCTCATTGGTTTTGGATGCACCAC TGCCTACAAGATCCCCACACCGACTGTGGAGCTCCTTGAGACTGGATTTA GCGTTTCCATACCGGATGAAGAGGGCGTAAAAGTGGTGGCCTTTAATGTA AATCGCAATCGGAATTTCACATCCTTCATAAACGAGGGACAGTACAATGT GAGATTGACTGAACCCCAGAACGGCAGGTGGACGACCAACTTCAGTTCGG TTCCCTTGAGATCCCAAGATGTTCTATACCTTTGGACAAGTGTGCAGCAC CAAAAGGCTGTGTATCAAGATCTGGCGCAGCCCCTGCCAGTCTGCAATCT CGGCGGAGAGTATCGGCCCAGGGGATGTTCGCCCGGTGATGATGACTTTA CGGATGACAACCAGCTAAGTACTGAGGACAGTGCTTTGGAACCCACCGCT CCCTCCGTCTGTGAACCTTCTGAAAGCCAGGTTTCGCCGCAAATCGGTGT TTCCATATGTAAGGGACAACTTTTGTTTGAGGAGACTTTTGATCAGCTGA ATGAATCTCTGTGGATACATGATGTTCGCCTGCCCCTCGACTCCAAGGAT GCAGAGTTCGTCTTGTACGACGGGAAGGCCAAAGTTCACGATGGCAACCT GGTGATTGAGCCGCTTCTTTGGTCCAGCTATCGCCCGGATCTCTCCATAG CCAACTCCAGGCTCGATCTATCGGAGCGTTGTACTGGAACCCATAACAGA ATTAAGGAATGCATCCTGCATTCCACGGGCAGTGGACCCAGTGGGATAAT GCCCCCAATTGTAACACCTCGAATCAGCACCAAGGAAACCTTTGCCTTTC AATACGGACGCATTGAGATCCGTGCCAAGCTACCAAAGGGAGATTGGATA GTACCACTCCTACTACTCGAACCCCTCACCGAATGGTACGGGCAATCGGG CTACGAATCCGGCCAGCTGCGAGTGGCCTTGGCCAGGGGTAACTCCGTGC TGAGGATGCCGCGCGGAAAGCTTGTAGATGGTAGATCCCTATACGGAGGA CCCGTACTCTCCACGGATGCCCACCAAAGGGAGGACTTATGGCTGAGCAA GCGAAAGATATCCCATTTCGGCGATGACTTTCACACCTACAGCTTGGATT GGAGCAGCAATAGGCTGCTCTTCTCCGTAGATGGTCAGGTCTATGGAGAG ATGCTGAATGGTTTCACTGAACTGGACGAGAATCCCAGGTGGAAGCAGGG CGGTCCCATGGCCCCGTTCGATAAAATGTTTTACATTTCGTTGGGCGTCT CTGTGGGCGGATTTGGTGACTTTGTGGACCATCTTCGCACCGCCACTTAT GAGAAGCCTTGGGCCAACTATCATCCCCAGGCGAAGCTGCAGTTCCACCA GGCCCAAGACCAGTGGCTACCCACATGGAAACAGCCGGCCTTGAAGATCG ATTATGTTCGTGTCTTCGCCAACTGATAACTAAAATCCATGATTTAGGTA GATGTTTATAAAATTACACATAAGTGAACGTGCCGATCGAAATCTATAAA TCTATAAATAAATAAAGTCCTAAGAGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GNBP1-RA | 2093 | GNBP1-RA | 223..2001 | 1..1779 | 8895 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 18665974..18666762 | 315..1103 | 3945 | 100 | Plus |
chr3L | 24539361 | chr3L | 18666824..18667201 | 1101..1478 | 1890 | 100 | Plus |
chr3L | 24539361 | chr3L | 18665488..18665802 | 1..315 | 1575 | 100 | Plus |
chr3L | 24539361 | chr3L | 18667257..18667555 | 1478..1776 | 1480 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 18676295..18677083 | 315..1103 | 3945 | 100 | Plus |
3L | 28110227 | 3L | 18677145..18677522 | 1101..1478 | 1890 | 100 | Plus |
3L | 28110227 | 3L | 18675809..18676123 | 1..315 | 1575 | 100 | Plus |
3L | 28110227 | 3L | 18677578..18677879 | 1478..1779 | 1510 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 18669395..18670183 | 315..1103 | 3945 | 100 | Plus |
3L | 28103327 | 3L | 18670245..18670622 | 1101..1478 | 1890 | 100 | Plus |
3L | 28103327 | 3L | 18668909..18669223 | 1..315 | 1575 | 100 | Plus |
3L | 28103327 | 3L | 18670678..18670979 | 1478..1779 | 1510 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 18665488..18665802 | 1..315 | 100 | -> | Plus |
chr3L | 18665975..18666759 | 316..1100 | 100 | -> | Plus |
chr3L | 18666824..18667201 | 1101..1478 | 100 | -> | Plus |
chr3L | 18667258..18667555 | 1479..1776 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GNBP1-RA | 1..1479 | 198..1676 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GNBP1-RA | 1..1479 | 198..1676 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GNBP1-RA | 1..1479 | 198..1676 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GNBP1-RA | 1..1479 | 198..1676 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GNBP1-RA | 1..1479 | 198..1676 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GNBP1-RA | 1..1772 | 5..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GNBP1-RA | 1..1772 | 5..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GNBP1-RA | 10..1785 | 1..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GNBP1-RA | 1..1772 | 5..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GNBP1-RA | 10..1785 | 1..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18675809..18676123 | 1..315 | 100 | -> | Plus |
3L | 18676296..18677080 | 316..1100 | 100 | -> | Plus |
3L | 18677145..18677522 | 1101..1478 | 100 | -> | Plus |
3L | 18677579..18677876 | 1479..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18675809..18676123 | 1..315 | 100 | -> | Plus |
3L | 18676296..18677080 | 316..1100 | 100 | -> | Plus |
3L | 18677145..18677522 | 1101..1478 | 100 | -> | Plus |
3L | 18677579..18677876 | 1479..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18675809..18676123 | 1..315 | 100 | -> | Plus |
3L | 18676296..18677080 | 316..1100 | 100 | -> | Plus |
3L | 18677145..18677522 | 1101..1478 | 100 | -> | Plus |
3L | 18677579..18677876 | 1479..1776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 18670679..18670976 | 1479..1776 | 100 | Plus | |
arm_3L | 18668909..18669223 | 1..315 | 100 | -> | Plus |
arm_3L | 18669396..18670180 | 316..1100 | 100 | -> | Plus |
arm_3L | 18670245..18670622 | 1101..1478 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18668909..18669223 | 1..315 | 100 | -> | Plus |
3L | 18669396..18670180 | 316..1100 | 100 | -> | Plus |
3L | 18670245..18670622 | 1101..1478 | 100 | -> | Plus |
3L | 18670679..18670976 | 1479..1776 | 100 | Plus |
Translation from 197 to 1675
> LD15841.pep MPGLCIGILLLIGFGCTTAYKIPTPTVELLETGFSVSIPDEEGVKVVAFN VNRNRNFTSFINEGQYNVRLTEPQNGRWTTNFSSVPLRSQDVLYLWTSVQ HQKAVYQDLAQPLPVCNLGGEYRPRGCSPGDDDFTDDNQLSTEDSALEPT APSVCEPSESQVSPQIGVSICKGQLLFEETFDQLNESLWIHDVRLPLDSK DAEFVLYDGKAKVHDGNLVIEPLLWSSYRPDLSIANSRLDLSERCTGTHN RIKECILHSTGSGPSGIMPPIVTPRISTKETFAFQYGRIEIRAKLPKGDW IVPLLLLEPLTEWYGQSGYESGQLRVALARGNSVLRMPRGKLVDGRSLYG GPVLSTDAHQREDLWLSKRKISHFGDDFHTYSLDWSSNRLLFSVDGQVYG EMLNGFTELDENPRWKQGGPMAPFDKMFYISLGVSVGGFGDFVDHLRTAT YEKPWANYHPQAKLQFHQAQDQWLPTWKQPALKIDYVRVFAN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23634-PA | 492 | GF23634-PA | 1..492 | 1..492 | 1949 | 74 | Plus |
Dana\GF10811-PA | 466 | GF10811-PA | 11..466 | 5..492 | 600 | 31.3 | Plus |
Dana\GF24364-PA | 492 | GF24364-PA | 4..490 | 1..490 | 486 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13669-PA | 492 | GG13669-PA | 1..492 | 1..492 | 2440 | 93.5 | Plus |
Dere\GG15732-PA | 432 | GG15732-PA | 2..431 | 29..491 | 594 | 33 | Plus |
Dere\GG14358-PA | 486 | GG14358-PA | 14..485 | 9..491 | 501 | 29.8 | Plus |
Dere\GG13671-PA | 427 | GG13671-PA | 107..421 | 157..491 | 313 | 30.5 | Plus |
Dere\GG13670-PA | 389 | GG13670-PA | 75..383 | 155..491 | 237 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14368-PA | 490 | GH14368-PA | 27..489 | 19..491 | 1522 | 62.6 | Plus |
Dgri\GH14367-PA | 432 | GH14367-PA | 2..431 | 29..491 | 573 | 33.1 | Plus |
Dgri\GH15336-PA | 484 | GH15336-PA | 9..482 | 4..490 | 463 | 29.8 | Plus |
Dgri\GH17200-PA | 189 | GH17200-PA | 1..183 | 295..491 | 193 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GNBP1-PA | 492 | CG6895-PA | 1..492 | 1..492 | 2643 | 100 | Plus |
GNBP2-PB | 461 | CG4144-PB | 9..460 | 8..491 | 580 | 32.5 | Plus |
GNBP2-PA | 432 | CG4144-PA | 2..431 | 29..491 | 559 | 32.6 | Plus |
GNBP2-PD | 410 | CG4144-PD | 15..409 | 70..491 | 529 | 33.1 | Plus |
GNBP3-PA | 490 | CG5008-PA | 13..489 | 5..491 | 478 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13965-PA | 495 | GI13965-PA | 28..494 | 20..491 | 1513 | 62 | Plus |
Dmoj\GI11311-PA | 451 | GI11311-PA | 1..451 | 22..492 | 568 | 30.9 | Plus |
Dmoj\GI12940-PA | 487 | GI12940-PA | 4..486 | 3..491 | 487 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22887-PA | 499 | GL22887-PA | 1..499 | 1..492 | 1896 | 72 | Plus |
Dper\GL22693-PA | 432 | GL22693-PA | 2..431 | 29..491 | 584 | 33.5 | Plus |
Dper\GL20727-PA | 449 | GL20727-PA | 12..448 | 4..491 | 441 | 28.3 | Plus |
Dper\GL22888-PA | 129 | GL22888-PA | 21..115 | 316..411 | 168 | 34.7 | Plus |
Dper\GL10856-PA | 101 | GL10856-PA | 2..100 | 18..115 | 161 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19936-PA | 499 | GA19936-PA | 1..499 | 1..492 | 1903 | 72.4 | Plus |
Dpse\GA17986-PA | 432 | GA17986-PA | 2..431 | 29..491 | 582 | 33.8 | Plus |
Dpse\GA18590-PA | 496 | GA18590-PA | 12..495 | 4..491 | 497 | 30 | Plus |
Dpse\GA23915-PA | 392 | GA23915-PA | 57..386 | 150..491 | 359 | 28.7 | Plus |
Dpse\GA23914-PA | 136 | GA23914-PA | 4..122 | 284..411 | 237 | 38.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14984-PA | 492 | GM14984-PA | 1..492 | 1..492 | 2586 | 97.6 | Plus |
Dsec\GM14928-PA | 432 | GM14928-PA | 2..431 | 29..491 | 591 | 32.6 | Plus |
Dsec\GM25102-PA | 490 | GM25102-PA | 25..489 | 19..491 | 482 | 29.6 | Plus |
Dsec\GM14986-PA | 625 | GM14986-PA | 308..619 | 158..491 | 313 | 31.3 | Plus |
Dsec\GM22021-PA | 152 | GM22021-PA | 12..115 | 8..111 | 146 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GNBP1-PA | 492 | GD14761-PA | 1..492 | 1..492 | 2595 | 98 | Plus |
Dsim\GD12334-PA | 432 | GD12334-PA | 2..431 | 29..491 | 591 | 32.6 | Plus |
Dsim\GD14138-PA | 490 | GD14138-PA | 13..489 | 5..491 | 493 | 29.9 | Plus |
Dsim\GD14763-PA | 332 | GD14763-PA | 5..326 | 155..491 | 318 | 30.7 | Plus |
Dsim\GD14762-PA | 376 | GD14762-PA | 158..376 | 171..401 | 201 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11226-PA | 500 | GJ11226-PA | 12..499 | 9..491 | 1490 | 60.6 | Plus |
Dvir\GJ14103-PA | 432 | GJ14103-PA | 2..432 | 29..492 | 601 | 32.4 | Plus |
Dvir\GJ13082-PA | 491 | GJ13082-PA | 21..490 | 18..491 | 495 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12242-PA | 495 | GK12242-PA | 1..491 | 1..491 | 1662 | 62.3 | Plus |
Dwil\GK10581-PA | 432 | GK10581-PA | 2..431 | 29..491 | 585 | 33.4 | Plus |
Dwil\GK16747-PA | 497 | GK16747-PA | 6..496 | 10..491 | 509 | 31.4 | Plus |
Dwil\GK10787-PA | 180 | GK10787-PA | 1..174 | 295..491 | 174 | 25.5 | Plus |
Dwil\GK20626-PA | 146 | GK20626-PA | 12..112 | 15..115 | 148 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GNBP1-PA | 492 | GE19965-PA | 1..492 | 1..492 | 2473 | 94.1 | Plus |
Dyak\GE22064-PA | 432 | GE22064-PA | 2..431 | 29..491 | 608 | 33.2 | Plus |
Dyak\GE20789-PA | 490 | GE20789-PA | 25..489 | 19..491 | 476 | 30 | Plus |
Dyak\GE19968-PA | 464 | GE19968-PA | 4..458 | 7..491 | 299 | 26.9 | Plus |
Dyak\GE19966-PA | 458 | GE19966-PA | 139..452 | 150..491 | 246 | 26.1 | Plus |
Translation from 197 to 1675
> LD15841.hyp MPGLCIGILLLIGFGCTTAYKIPTPTVELLETGFSVSIPDEEGVKVVAFN VNRNRNFTSFINEGQYNVRLTEPQNGRWTTNFSSVPLRSQDVLYLWTSVQ HQKAVYQDLAQPLPVCNLGGEYRPRGCSPGDDDFTDDNQLSTEDSALEPT APSVCEPSESQVSPQIGVSICKGQLLFEETFDQLNESLWIHDVRLPLDSK DAEFVLYDGKAKVHDGNLVIEPLLWSSYRPDLSIANSRLDLSERCTGTHN RIKECILHSTGSGPSGIMPPIVTPRISTKETFAFQYGRIEIRAKLPKGDW IVPLLLLEPLTEWYGQSGYESGQLRVALARGNSVLRMPRGKLVDGRSLYG GPVLSTDAHQREDLWLSKRKISHFGDDFHTYSLDWSSNRLLFSVDGQVYG EMLNGFTELDENPRWKQGGPMAPFDKMFYISLGVSVGGFGDFVDHLRTAT YEKPWANYHPQAKLQFHQAQDQWLPTWKQPALKIDYVRVFAN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GNBP1-PA | 492 | CG6895-PA | 1..492 | 1..492 | 2643 | 100 | Plus |
GNBP2-PB | 461 | CG4144-PB | 9..460 | 8..491 | 580 | 32.5 | Plus |
GNBP2-PA | 432 | CG4144-PA | 2..431 | 29..491 | 559 | 32.6 | Plus |
GNBP2-PD | 410 | CG4144-PD | 15..409 | 70..491 | 529 | 33.1 | Plus |
GNBP3-PA | 490 | CG5008-PA | 13..489 | 5..491 | 478 | 29.5 | Plus |