BDGP Sequence Production Resources |
Search the DGRC for LD15851
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 158 |
Well: | 51 |
Vector: | pBS SK- |
Associated Gene/Transcript | chic-RB |
Protein status: | LD15851.pep: gold |
Preliminary Size: | 1445 |
Sequenced Size: | 1073 |
Gene | Date | Evidence |
---|---|---|
CG9553 | 2001-01-01 | Release 2 assignment |
CG9553 | 2001-11-29 | Blastp of sequenced clone |
CG9553 | 2003-01-01 | Sim4 clustering to Release 3 |
chic | 2008-04-29 | Release 5.5 accounting |
chic | 2008-08-15 | Release 5.9 accounting |
chic | 2008-12-18 | 5.12 accounting |
1073 bp (1073 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069444
> LD15851.complete CCAGGTTGGTTTCTATCTTTAAAAAATTATGATATTTTAGTACGAAAGGA CCAAATATCAAAATAATTATATTTTTTATAAGAATATTATTAATATAAAA AAAAAAAAAAAAAAAAACTCGAAAGTAAGTTACCCCAAGAAAAAATCGTC GGTGTTGCGGTTTTTCTTTGTCTCCCTGCCAATTTCGTGTGACCCCCGAA ACGAAAGTGCGACTCGCCGTGCGGTAAAGCAACAGCGATCCATATCCAGA TCCATATATATCAGTTCAACTTAATCCGCACCCACGACAAACAAAGCACC ATGAGCTGGCAAGATTATGTGGACAACCAACTCCTGGCCTCGCAGTGCGT GACCAAGGCGTGCATCGCCGGCCACGACGGCAACATTTGGGCGCAGTCCA GTGGCTTTGAGGTGACAAAAGAGGAGCTCTCCAAACTGATCAGCGGCTTT GACCAGCAGGACGGTCTCACCAGCAACGGCGTGACACTCGCCGGCCAGCG GTACATTTACCTTTCCGGCACAGACCGCGTGGTGCGCGCCAAGCTCGGCC GGAGCGGAGTGCACTGCATGAAGACAACACAAGCCGTGATCGTTTCCATC TACGAGGATCCCGTTCAGCCCCAGCAGGCCGCTTCCGTGGTAGAGAAACT TGGAGATTATCTGATTACTTGCGGGTACTAGGAGAATAGATCAACACAAA CACCCCCATCAACCACAACAACAACAACACACACACACCAACAACTACAA CTACAACAACAACAGCAGCAACAAATTTGATAAGAGCGAACCGTAAATGA ACTAATAACACATAAAAAGTAATTATTAATATTTAAATTTATGGGAAAAG AAAAACCAACGGCCAAGAAAGAATTTGCGGTTTTTTGTGTGTAGCAGAGG AAATGGATCGAGTAAAAATGCATATGCTTGAAAGAAAAAAAAAATGTCAA AAAACGCAAATAACTACCCAACTACAAAAAAATTATAAATTTCTGCATTA TTATATTTAAAACTTTTTGGTTTATACGATAAAAATAAAAGGAAAACACA AAACTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 5972254..5972727 | 1055..582 | 2370 | 100 | Minus |
chr2L | 23010047 | chr2L | 5978459..5978753 | 415..121 | 1475 | 100 | Minus |
chr2L | 23010047 | chr2L | 5975662..5975835 | 583..410 | 870 | 100 | Minus |
chrU | 10048995 | chrU | 5301226..5301325 | 100..1 | 500 | 100 | Minus |
chrM | 19516 | chrM | 12732..12831 | 100..1 | 500 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mt:lrRNA-RA | 1325 | CR34094-RA | 1227..1325 | 1..99 | 495 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 5973197..5973676 | 1061..582 | 2385 | 99.8 | Minus |
2L | 23513712 | 2L | 5979408..5979702 | 415..121 | 1475 | 100 | Minus |
2L | 23513712 | 2L | 5976611..5976784 | 583..410 | 870 | 100 | Minus |
M | 19908 | M | 13119..13218 | 100..1 | 500 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 5973197..5973676 | 1061..582 | 2385 | 99.7 | Minus |
2L | 23513712 | 2L | 5979408..5979702 | 415..121 | 1475 | 100 | Minus |
2L | 23513712 | 2L | 5976611..5976784 | 583..410 | 870 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 5972600..5972725 | 584..709 | 100 | <- | Minus |
chr2L | 5975662..5975833 | 412..583 | 100 | <- | Minus |
chr2L | 5978463..5978755 | 119..411 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chic-RB | 1..381 | 301..681 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chic-RB | 1..381 | 301..681 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chic-RD | 1..381 | 301..681 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chic-RB | 1..381 | 301..681 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chic-RD | 1..381 | 301..681 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mt:lrRNA-RA | 1227..1325 | 1..99 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chic-RB | 162..1096 | 121..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chic-RB | 162..1096 | 121..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chic-RB | 165..1099 | 121..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chic-RB | 162..1096 | 121..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chic-RB | 165..1099 | 121..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5973203..5973674 | 584..1055 | 100 | <- | Minus |
2L | 5976611..5976782 | 412..583 | 100 | <- | Minus |
2L | 5979412..5979704 | 119..411 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5973203..5973674 | 584..1055 | 100 | <- | Minus |
2L | 5976611..5976782 | 412..583 | 100 | <- | Minus |
2L | 5979412..5979704 | 119..411 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5973203..5973674 | 584..1055 | 100 | <- | Minus |
2L | 5976611..5976782 | 412..583 | 100 | <- | Minus |
2L | 5979412..5979704 | 119..411 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 5973203..5973674 | 584..1055 | 100 | <- | Minus |
arm_2L | 5976611..5976782 | 412..583 | 100 | <- | Minus |
arm_2L | 5979412..5979704 | 119..411 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5973203..5973674 | 584..1055 | 100 | <- | Minus |
2L | 5976611..5976782 | 412..583 | 100 | <- | Minus |
2L | 5979412..5979704 | 119..411 | 99 | <- | Minus |
Translation from 300 to 680
> LD15851.pep MSWQDYVDNQLLASQCVTKACIAGHDGNIWAQSSGFEVTKEELSKLISGF DQQDGLTSNGVTLAGQRYIYLSGTDRVVRAKLGRSGVHCMKTTQAVIVSI YEDPVQPQQAASVVEKLGDYLITCGY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14290-PA | 153 | GF14290-PA | 1..153 | 1..126 | 617 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24265-PA | 126 | GG24265-PA | 1..126 | 1..126 | 662 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10716-PA | 126 | GH10716-PA | 1..126 | 1..126 | 647 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chic-PF | 126 | CG9553-PF | 1..126 | 1..126 | 656 | 100 | Plus |
chic-PE | 126 | CG9553-PE | 1..126 | 1..126 | 656 | 100 | Plus |
chic-PD | 126 | CG9553-PD | 1..126 | 1..126 | 656 | 100 | Plus |
chic-PB | 126 | CG9553-PB | 1..126 | 1..126 | 656 | 100 | Plus |
chic-PC | 126 | CG9553-PC | 1..126 | 1..126 | 656 | 100 | Plus |
chic-PA | 126 | CG9553-PA | 1..126 | 1..126 | 656 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11304-PA | 126 | GI11304-PA | 1..126 | 1..126 | 647 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19093-PA | 130 | GL19093-PA | 1..130 | 1..126 | 523 | 82.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21874-PA | 126 | GA21874-PA | 1..126 | 1..126 | 650 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17979-PA | 126 | GM17979-PA | 1..126 | 1..126 | 662 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\chic-PA | 142 | GD22617-PA | 1..142 | 1..126 | 498 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12548-PA | 126 | GJ12548-PA | 1..126 | 1..126 | 641 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15407-PA | 126 | GK15407-PA | 1..126 | 1..126 | 651 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18963-PA | 126 | GE18963-PA | 1..126 | 1..126 | 662 | 99.2 | Plus |
Translation from 300 to 680
> LD15851.hyp MSWQDYVDNQLLASQCVTKACIAGHDGNIWAQSSGFEVTKEELSKLISGF DQQDGLTSNGVTLAGQRYIYLSGTDRVVRAKLGRSGVHCMKTTQAVIVSI YEDPVQPQQAASVVEKLGDYLITCGY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chic-PF | 126 | CG9553-PF | 1..126 | 1..126 | 656 | 100 | Plus |
chic-PE | 126 | CG9553-PE | 1..126 | 1..126 | 656 | 100 | Plus |
chic-PD | 126 | CG9553-PD | 1..126 | 1..126 | 656 | 100 | Plus |
chic-PB | 126 | CG9553-PB | 1..126 | 1..126 | 656 | 100 | Plus |
chic-PC | 126 | CG9553-PC | 1..126 | 1..126 | 656 | 100 | Plus |