Clone LD15865 Report

Search the DGRC for LD15865

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:158
Well:65
Vector:pBS SK-
Associated Gene/TranscriptAGO3-RD
Protein status:LD15865.pep: gold
Sequenced Size:2718

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG40300 2007-11-01 Manual selection by Ken Wan
AGO3 2008-04-29 Picked prior to 5.5
AGO3 2008-12-18 5.12 accounting

Clone Sequence Records

LD15865.complete Sequence

2718 bp assembled on 2008-10-27

GenBank Submission: BT050541.1

> LD15865.complete
AAATTGAAAAGTCGAATTATTTTAGCATGTCTGGAAGAGGAAATTTGTTG
AGCTTATTTAATAAAAATGCTGGCAATATGGGAAAATCAATTTCAAGTAA
AGATCATGAAATCGACAGTGGCTTGGATTTTAACAACTCTGAATCAAGTG
GAGAACGTTTACTGTCAAGCCATAATATTGAAACTGATCTTATAACCACT
CTTCAACATGTAAACATCTCGGTCGGCCGAGGACGTGCTAGGCTTATAGA
CACATTAAAAACAGATGACCATACATCAAATCAATTTATAACATCTGAAT
CAAAGGAAAACATTACCAAAAAGACAAAGGGCCCCGAATCGGAAGCAATT
GCTTCAGAAAATGGATTATTTTTTCCCGATTTAATTTACGGATCTAAAGG
TTCATCTGTTAATATATATTGTAATTACTTAAAGCTAACGACGGATGAAT
CCAAGGGAGTTTTTAATTACGAAGTGCGTTTTTTTCCTCCCATTGACTCT
GTTCATTTAAGAATAAAATATTTAAATGATCATAAGGATAAACTCGGTGG
AACCAAGACATTTGACGGAAATACTTTATATTTACCTATTTTGTTACCAA
ATAAGATGACCGTCTTTATTTCAAAGGCGGAAGATGTTGAGTTGCAGATT
CGCATTTTATACAAAAAAAAAGAGGAAATGAGGAACTGCACGCAATTATA
TAATATTTTATTCGATAGAGTTATGAAAGTATTGAATTACGTAAAATTTG
ATCGCAAGCAGTTTGATCCTTCGCGTCCAAAAATAATACCACTGGCAAAG
TTAGAAGTTTGGCCTGGCTATGTTACAGCCGTTGACGAATACAAAGGTGG
TTTAATGCTATGCTGCGACGTTTCGCATCGTATACTTTGCCAAAAAACTG
TTCTAGAAATGCTGGTTGATCTTTATCAGCAAAATGTAGAGCATTACCAA
GAATCAGCAAGAAAAATGTTGGTTGGAAATATTGTCTTAACTAGGTATAA
CAATCGTACATATAAAATAAATGACATTTGTTTTGATCAAAATCCAACAT
GTCAGTTTGAAATTAAAACTGGCTGCACAAGTTACGTGGAGTATTACAAA
CAATATCACAATATAAACATAAAGGACGTTAATCAACCATTGATTTACAG
TATAAAGAAATCAAGAGGAATTCCAGCAGAAAGGGAAAATTTACAGTTTT
GTTTAATTCCAGAATTGTGTTATCTTACTGGGCTGCGAGACGAAGTACGG
TCAGATAACAAGCTTATGCGCGAGATTGCTACATTTACAAGAGTTTCGCC
AAATCAACGACAGATGGCGTTAAATAAATTTTACGAAAATGTTTCAAATA
CACCCGCCGCACAAGAAATTCTAAATAGCTGGGGTCTTTCATTAACGAAT
AATTCCAACAAGATAAGTGGGCGTCAAATGGACATAGAGCAAATATATTT
TTCAAAAATTAGTGTATCGGCCGGAAGGTCCGCAGAGTTCTCCAAACATG
CTGTGACCAATGAAATGTTGAAAGTAGTCCACCTGAGTAAATGGATCATT
ATACATTTAAGAAATTATAGACAAGCTGCAACTAGCTTGCTCGATAACAT
GAAACAGGCTTGTGAGTCACTTGGTATGAACATTTCTAACCCAACAATGA
TTTCGTTAGATCATGACCGAATCGATGCCTACATTCAAGCACTGCGGCGA
AATATAACTATGAATACGCAAATGGTCGTATGTATTTGTCATAACAGAAG
AGATGATCGTTATGCTGCAATAAAAAAAATATGTTGCTCGGAAATACCTA
TACCATCACAGGTTATAAATGCTAAAACTTTACAAAATGATCTTAAAATT
CGATCCGTTGTTCAAAAAATTGTTCTACAAATGAACTGTAAACTCGGAGG
CTCATTATGGACGGTAAAAATTCCATTTAAAAATGTAATGATTTGCGGAA
TAGACTCATATCATGACCCATCTAATCGGGGGAATTCTGTTGCTGCATTT
GTGGCCTCCATAAATTCGTCGTATTCACAGTGGTACAGTAAAGCTGTTGT
ACAAACAAAACGTGAAGAAATTGTTAATGGGCTCTCTGCATCTTTTGAAA
TTGCATTAAAAATGTATCGTAAAAGGAATGGCAAACTCCCCACAAATATT
ATAATATACAGAGATGGAATTGGAGATGGACAGCTTTATACATGTCTTAA
TTATGAAATTCCACAATTTGAAATGGTGTGTGGAAATCGCATAAAAATTT
CATATATTGTAGTCCAAAAACGAATTAACACTCGCATCTTCTCGGGTAGC
GGCATTCATCTAGAAAACCCATTGCCAGGAACTGTCGTAGATCAACATAT
AACAAAATCAAATATGTATGATTTTTTTTTGGTTTCGCAATTGGTACGAC
AGGGTACTGTAACCCCAACTCATTATGTTGTTCTTCGAGATGACTGCAAT
TATGGACCCGACATAATTCAAAAACTAAGTTACAAACTTTGTTTTTTATA
TTACAATTGGGCTGGTACAGTACGAATTCCAGCTTGTTGTATGTACGCTC
ACAAATTGGCTTATTTGATTGGACAAAGTATTCAACGAGATGTGGCTGAA
GCACTTTCTGAAAAACTATTTTATCTTTAAAATTATAAAAGGCCTGTTCA
AAACACTACAATTATTAAATCTGTATATTTCAAAACAAAAATAAATAATA
AAAAAAAAAAAAAAAAAA

LD15865.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:11:39
Subject Length Description Subject Range Query Range Score Percent Strand
AGO3-RF 2848 AGO3-RF 140..2847 1..2708 13540 100 Plus
AGO3-RD 2801 AGO3-RD 93..2800 1..2708 13510 99.9 Plus
AGO3-RE 2688 AGO3-RE 23..2688 24..2689 13330 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:43:14
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 23557459..23558874 398..1813 7080 100 Plus
chr3L 24539361 chr3L 23555753..23556130 24..401 1890 100 Plus
chr3L 24539361 chr3L 23615448..23615817 401..24 1735 97.9 Minus
chr3L 24539361 chr3L 23638034..23638283 2294..2543 1250 100 Plus
chr3L 24539361 chr3L 23572090..23572276 1809..1995 935 100 Plus
chr3L 24539361 chr3L 23607380..23607551 1990..2161 845 99.4 Plus
chr3L 24539361 chr3L 23678391..23678547 2543..2699 785 100 Plus
chr3L 24539361 chr3L 23623159..23623295 2159..2295 685 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:03:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:43:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 23568545..23569960 398..1813 7080 100 Plus
3L 28110227 3L 23566839..23567216 24..401 1890 100 Plus
3L 28110227 3L 23626536..23626905 401..24 1735 97.9 Minus
3L 28110227 3L 23649123..23649372 2294..2543 1250 100 Plus
3L 28110227 3L 23583178..23583364 1809..1995 935 100 Plus
3L 28110227 3L 23618468..23618639 1990..2161 845 99.4 Plus
3L 28110227 3L 23689484..23689649 2543..2708 830 100 Plus
3L 28110227 3L 23634248..23634383 2160..2295 680 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:29:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 23561645..23563060 398..1813 7080 100 Plus
3L 28103327 3L 23559939..23560316 24..401 1890 100 Plus
3L 28103327 3L 23619636..23619962 401..75 1635 100 Minus
3L 28103327 3L 23642223..23642472 2294..2543 1250 100 Plus
3L 28103327 3L 23576278..23576464 1809..1995 935 100 Plus
3L 28103327 3L 23611568..23611739 1990..2161 845 99.4 Plus
3L 28103327 3L 23682584..23682749 2543..2708 830 100 Plus
3L 28103327 3L 23627348..23627483 2160..2295 680 100 Plus
3L 28103327 3L 23619962..23620005 67..24 220 100 Minus
Blast to na_te.dros performed on 2019-03-16 21:43:13 has no hits.

LD15865.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:43:55 Download gff for LD15865.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 23543580..23543602 1..23 100 -> Plus
chr3L 23555753..23556128 24..399 100 -> Plus
chr3L 23557461..23558872 400..1811 100 -> Plus
chr3L 23572093..23572276 1812..1995 100 -> Plus
chr3L 23607386..23607551 1996..2161 100 -> Plus
chr3L 23623162..23623294 2162..2294 100 -> Plus
chr3L 23638035..23638283 2295..2543 100 -> Plus
chr3L 23678392..23678547 2544..2699 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:40:47 Download gff for LD15865.complete
Subject Subject Range Query Range Percent Splice Strand
AGO3-RF 1..2604 27..2630 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:17:04 Download gff for LD15865.complete
Subject Subject Range Query Range Percent Splice Strand
AGO3-RF 1..2604 27..2630 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:00:52 Download gff for LD15865.complete
Subject Subject Range Query Range Percent Splice Strand
AGO3-RD 1..2604 27..2630 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:29:47 Download gff for LD15865.complete
Subject Subject Range Query Range Percent Splice Strand
AGO3-RD 1..2604 27..2630 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:40:46 Download gff for LD15865.complete
Subject Subject Range Query Range Percent Splice Strand
AGO3-RF 53..2733 1..2681 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:17:03 Download gff for LD15865.complete
Subject Subject Range Query Range Percent Splice Strand
AGO3-RF 53..2733 1..2681 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:00:52 Download gff for LD15865.complete
Subject Subject Range Query Range Percent Splice Strand
AGO3-RF 75..2773 1..2699 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-27 10:00:07 Download gff for LD15865.complete
Subject Subject Range Query Range Percent Splice Strand
AGO3-RF 53..2733 1..2681 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:29:47 Download gff for LD15865.complete
Subject Subject Range Query Range Percent Splice Strand
AGO3-RF 75..2773 1..2699 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:43:55 Download gff for LD15865.complete
Subject Subject Range Query Range Percent Splice Strand
3L 23554667..23554689 1..23 100 -> Plus
3L 23566839..23567214 24..399 100 -> Plus
3L 23568547..23569958 400..1811 100 -> Plus
3L 23583181..23583364 1812..1995 100 -> Plus
3L 23618474..23618639 1996..2161 100 -> Plus
3L 23634250..23634382 2162..2294 100 -> Plus
3L 23649124..23649372 2295..2543 100 -> Plus
3L 23689485..23689640 2544..2699 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:43:55 Download gff for LD15865.complete
Subject Subject Range Query Range Percent Splice Strand
3L 23554667..23554689 1..23 100 -> Plus
3L 23566839..23567214 24..399 100 -> Plus
3L 23568547..23569958 400..1811 100 -> Plus
3L 23583181..23583364 1812..1995 100 -> Plus
3L 23618474..23618639 1996..2161 100 -> Plus
3L 23634250..23634382 2162..2294 100 -> Plus
3L 23649124..23649372 2295..2543 100 -> Plus
3L 23689485..23689640 2544..2699 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:43:55 Download gff for LD15865.complete
Subject Subject Range Query Range Percent Splice Strand
3L 23554667..23554689 1..23 100 -> Plus
3L 23566839..23567214 24..399 100 -> Plus
3L 23568547..23569958 400..1811 100 -> Plus
3L 23583181..23583364 1812..1995 100 -> Plus
3L 23618474..23618639 1996..2161 100 -> Plus
3L 23634250..23634382 2162..2294 100 -> Plus
3L 23649124..23649372 2295..2543 100 -> Plus
3L 23689485..23689640 2544..2699 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:00:52 Download gff for LD15865.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 23682585..23682740 2544..2699 100   Plus
arm_3L 23547767..23547789 1..23 100 -> Plus
arm_3L 23559939..23560314 24..399 100 -> Plus
arm_3L 23561647..23563058 400..1811 100 -> Plus
arm_3L 23576281..23576464 1812..1995 100 -> Plus
arm_3L 23611574..23611739 1996..2161 100 -> Plus
arm_3L 23627350..23627482 2162..2294 100 -> Plus
arm_3L 23642224..23642472 2295..2543 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:48:06 Download gff for LD15865.complete
Subject Subject Range Query Range Percent Splice Strand
3L 23559939..23560314 24..399 100 -> Plus
3L 23561647..23563058 400..1811 100 -> Plus
3L 23576281..23576464 1812..1995 100 -> Plus
3L 23611574..23611739 1996..2161 100 -> Plus
3L 23627350..23627482 2162..2294 100 -> Plus
3L 23642224..23642472 2295..2543 100 -> Plus
3L 23682585..23682740 2544..2699 100   Plus
3L 23547767..23547789 1..23 100 -> Plus

LD15865.pep Sequence

Translation from 2 to 2629

> LD15865.pep
IEKSNYFSMSGRGNLLSLFNKNAGNMGKSISSKDHEIDSGLDFNNSESSG
ERLLSSHNIETDLITTLQHVNISVGRGRARLIDTLKTDDHTSNQFITSES
KENITKKTKGPESEAIASENGLFFPDLIYGSKGSSVNIYCNYLKLTTDES
KGVFNYEVRFFPPIDSVHLRIKYLNDHKDKLGGTKTFDGNTLYLPILLPN
KMTVFISKAEDVELQIRILYKKKEEMRNCTQLYNILFDRVMKVLNYVKFD
RKQFDPSRPKIIPLAKLEVWPGYVTAVDEYKGGLMLCCDVSHRILCQKTV
LEMLVDLYQQNVEHYQESARKMLVGNIVLTRYNNRTYKINDICFDQNPTC
QFEIKTGCTSYVEYYKQYHNINIKDVNQPLIYSIKKSRGIPAERENLQFC
LIPELCYLTGLRDEVRSDNKLMREIATFTRVSPNQRQMALNKFYENVSNT
PAAQEILNSWGLSLTNNSNKISGRQMDIEQIYFSKISVSAGRSAEFSKHA
VTNEMLKVVHLSKWIIIHLRNYRQAATSLLDNMKQACESLGMNISNPTMI
SLDHDRIDAYIQALRRNITMNTQMVVCICHNRRDDRYAAIKKICCSEIPI
PSQVINAKTLQNDLKIRSVVQKIVLQMNCKLGGSLWTVKIPFKNVMICGI
DSYHDPSNRGNSVAAFVASINSSYSQWYSKAVVQTKREEIVNGLSASFEI
ALKMYRKRNGKLPTNIIIYRDGIGDGQLYTCLNYEIPQFEMVCGNRIKIS
YIVVQKRINTRIFSGSGIHLENPLPGTVVDQHITKSNMYDFFLVSQLVRQ
GTVTPTHYVVLRDDCNYGPDIIQKLSYKLCFLYYNWAGTVRIPACCMYAH
KLAYLIGQSIQRDVAEALSEKLFYL*

LD15865.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:06:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20001-PA 384 GF20001-PA 1..362 241..604 1495 73.4 Plus
Dana\GF14047-PA 868 GF14047-PA 116..868 130..875 1189 34.4 Plus
Dana\GF14046-PA 873 GF14046-PA 112..873 130..875 1166 32.7 Plus
Dana\GF11153-PA 984 GF11153-PA 534..936 468..854 370 28 Plus
Dana\GF10056-PA 1019 GF10056-PA 187..980 107..853 284 22.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:06:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10337-PA 843 GG10337-PA 91..843 130..875 1161 33.6 Plus
Dere\GG10336-PA 858 GG10336-PA 97..858 130..875 1160 32.5 Plus
Dere\GG22457-PA 967 GG22457-PA 503..919 457..854 397 27.3 Plus
Dere\GG15907-PA 1168 GG15907-PA 363..1153 130..871 265 23.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:06:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13012-PA 636 GH13012-PA 1..636 241..875 2434 67.8 Plus
Dgri\GH10973-PA 853 GH10973-PA 92..853 130..875 1185 32.9 Plus
Dgri\GH10762-PA 878 GH10762-PA 127..878 130..875 1172 34.5 Plus
Dgri\GH22955-PA 990 GH22955-PA 540..942 468..854 370 28 Plus
Dgri\GH14741-PA 1115 GH14741-PA 559..1083 335..853 312 27 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:20:26
Subject Length Description Subject Range Query Range Score Percent Strand
AGO3-PF 867 CG40300-PF 1..867 9..875 4530 100 Plus
AGO3-PE 867 CG40300-PE 1..867 9..875 4530 100 Plus
AGO3-PD 867 CG40300-PD 1..867 9..875 4530 100 Plus
AGO3-PG 866 CG40300-PG 1..842 9..850 4400 99.8 Plus
aub-PC 795 CG6137-PC 34..795 130..875 1155 32.5 Plus
piwi-PB 843 CG6122-PB 91..843 130..875 1155 33.6 Plus
piwi-PA 843 CG6122-PA 91..843 130..875 1155 33.6 Plus
aub-PA 866 CG6137-PA 105..866 130..875 1155 32.5 Plus
AGO1-PB 950 CG6671-PB 469..902 457..854 347 25.9 Plus
AGO1-PD 984 CG6671-PD 503..936 457..854 347 25.9 Plus
AGO1-PA 984 CG6671-PA 503..936 457..854 347 25.9 Plus
AGO1-PC 984 CG6671-PC 503..936 457..854 347 25.9 Plus
AGO2-PB 1214 CG7439-PB 408..1199 130..871 299 23.1 Plus
AGO2-PC 1217 CG7439-PC 411..1202 130..871 299 23.1 Plus
AGO2-PE 787 CG7439-PE 6..772 154..871 285 22.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:06:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18157-PA 850 GI18157-PA 6..850 70..875 1196 32.2 Plus
Dmoj\GI20575-PA 881 GI20575-PA 129..881 130..875 1178 34.8 Plus
Dmoj\GI18445-PA 986 GI18445-PA 468..938 417..854 368 25.8 Plus
Dmoj\GI13119-PA 1048 GI13119-PA 487..1034 335..872 298 25.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:06:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20669-PA 321 GL20669-PA 1..320 285..604 1232 67.8 Plus
Dper\GL19138-PA 852 GL19138-PA 98..852 130..875 1167 33.4 Plus
Dper\GL19019-PA 531 GL19019-PA 1..531 241..763 763 31.5 Plus
Dper\GL25778-PA 484 GL25778-PA 98..450 130..484 506 31.5 Plus
Dper\GL17077-PA 985 GL17077-PA 535..937 468..854 370 28 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:06:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25552-PA 365 GA25552-PA 1..364 241..604 1443 70.1 Plus
Dpse\GA19382-PA 851 GA19382-PA 97..851 130..875 1172 33.9 Plus
Dpse\GA19370-PA 848 GA19370-PA 96..848 130..875 1158 33.1 Plus
Dpse\GA19767-PA 985 GA19767-PA 535..937 468..854 370 28 Plus
Dpse\GA28114-PA 1023 GA28114-PA 221..1009 124..872 288 23.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:06:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11225-PA 861 GM11225-PA 101..861 130..875 1179 33.2 Plus
Dsec\GM11236-PA 843 GM11236-PA 91..843 130..875 1173 33.6 Plus
Dsec\GM23254-PA 967 GM23254-PA 503..919 457..854 397 27.3 Plus
Dsec\GM25538-PA 254 GM25538-PA 22..225 663..857 238 33.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:06:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22206-PA 843 GD22206-PA 91..843 130..875 1178 33.8 Plus
Dsim\GD22205-PA 857 GD22205-PA 101..857 130..875 1172 33.2 Plus
Dsim\AGO2-PA 759 GD14553-PA 612..730 748..857 172 38.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:06:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14585-PA 857 GJ14585-PA 101..857 130..875 1194 33.2 Plus
Dvir\GJ13916-PA 863 GJ13916-PA 113..863 130..875 1120 34.6 Plus
Dvir\GJ21530-PA 989 GJ21530-PA 539..941 468..854 362 27.8 Plus
Dvir\GJ17143-PA 458 GJ17143-PA 4..449 424..853 266 25.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:06:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15249-PA 874 GK15249-PA 113..874 130..875 1206 33 Plus
Dwil\GK14888-PA 850 GK14888-PA 89..850 130..875 1203 33 Plus
Dwil\GK14889-PA 896 GK14889-PA 143..896 130..875 1156 33.1 Plus
Dwil\GK17851-PA 985 GK17851-PA 535..937 468..854 369 28 Plus
Dwil\GK24525-PA 907 GK24525-PA 348..893 335..872 282 24.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:06:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13099-PA 858 GE13099-PA 34..858 65..875 1178 31.1 Plus
Dyak\GE13110-PA 843 GE13110-PA 91..843 130..875 1169 33.4 Plus
Dyak\GE13329-PA 967 GE13329-PA 503..919 457..854 397 27.3 Plus
Dyak\AGO2-PA 1173 GE22249-PA 368..1146 130..859 285 23.9 Plus
Dyak\GE23151-PA 1140 GE23151-PA 579..1113 335..859 262 26.2 Plus

LD15865.hyp Sequence

Translation from 2 to 2629

> LD15865.hyp
IEKSNYFSMSGRGNLLSLFNKNAGNMGKSISSKDHEIDSGLDFNNSESSG
ERLLSSHNIETDLITTLQHVNISVGRGRARLIDTLKTDDHTSNQFITSES
KENITKKTKGPESEAIASENGLFFPDLIYGSKGSSVNIYCNYLKLTTDES
KGVFNYEVRFFPPIDSVHLRIKYLNDHKDKLGGTKTFDGNTLYLPILLPN
KMTVFISKAEDVELQIRILYKKKEEMRNCTQLYNILFDRVMKVLNYVKFD
RKQFDPSRPKIIPLAKLEVWPGYVTAVDEYKGGLMLCCDVSHRILCQKTV
LEMLVDLYQQNVEHYQESARKMLVGNIVLTRYNNRTYKINDICFDQNPTC
QFEIKTGCTSYVEYYKQYHNINIKDVNQPLIYSIKKSRGIPAERENLQFC
LIPELCYLTGLRDEVRSDNKLMREIATFTRVSPNQRQMALNKFYENVSNT
PAAQEILNSWGLSLTNNSNKISGRQMDIEQIYFSKISVSAGRSAEFSKHA
VTNEMLKVVHLSKWIIIHLRNYRQAATSLLDNMKQACESLGMNISNPTMI
SLDHDRIDAYIQALRRNITMNTQMVVCICHNRRDDRYAAIKKICCSEIPI
PSQVINAKTLQNDLKIRSVVQKIVLQMNCKLGGSLWTVKIPFKNVMICGI
DSYHDPSNRGNSVAAFVASINSSYSQWYSKAVVQTKREEIVNGLSASFEI
ALKMYRKRNGKLPTNIIIYRDGIGDGQLYTCLNYEIPQFEMVCGNRIKIS
YIVVQKRINTRIFSGSGIHLENPLPGTVVDQHITKSNMYDFFLVSQLVRQ
GTVTPTHYVVLRDDCNYGPDIIQKLSYKLCFLYYNWAGTVRIPACCMYAH
KLAYLIGQSIQRDVAEALSEKLFYL*

LD15865.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:42:49
Subject Length Description Subject Range Query Range Score Percent Strand
AGO3-PF 867 CG40300-PF 1..867 9..875 4530 100 Plus
AGO3-PE 867 CG40300-PE 1..867 9..875 4530 100 Plus
AGO3-PD 867 CG40300-PD 1..867 9..875 4530 100 Plus
AGO3-PG 866 CG40300-PG 1..842 9..850 4400 99.8 Plus
aub-PC 795 CG6137-PC 34..795 130..875 1155 32.5 Plus