BDGP Sequence Production Resources |
Search the DGRC for LD15927
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 159 |
Well: | 27 |
Vector: | pBS SK- |
Associated Gene/Transcript | wap-RA |
Protein status: | LD15927.pep: gold |
Sequenced Size: | 3032 |
Gene | Date | Evidence |
---|---|---|
CG14614-RA | 2009-06-22 | Replacement based on scoring |
3032 bp assembled on 2009-10-01
GenBank Submission: BT099938.1
> LD15927.complete CGGTCACACTGTTTTTGTGTGAAAATTCTGTCGAAAAGAATGTATTAAAA GTTCTTTGAATACTAATTCCGTGTAATTCCGACCGTGCTGTTTCAGAAAA CTGTGGTTGGATTGGAAACTTAACCAAATTATAAGGTAAAACCGGGGCAG CTTGCCCATCGAAGGACCGCCACAAACGAATTTTCGCGTCGCATTACGTT TTAGTGTTGCCACCTTATACGGAGTGCCGGGCACAATTCCACTTGCTGGC CAAACGGATGCGTTGCGGTCGCGATGTGCACGCCGTTGAATTAATTCCTT CGCCCTGTTGATTGAGTACAGTTCGACTTCTCCGATCGGTGTCCTCCAGA CCTAAATTTCGCCGGAATAACGACGGCAAACGGACGGACGGACTCTAGTC GGAAAACGGGCGAGCTGGCAATACTGCCAGTGCACAAAATGATGTGAATC TCGGAAAAGAGGAAAGCTACAGGAAAAGCCAAGGAAAAGCAAGCCGGTAA AGTGTGCAAATGCGAGTGGCAAGCAAAGACCTTTGTTTCCCATTCCATGA AGTTTTCTTGAGTTGTCCGCTGCTGTGAGTGGTCATTATCAGCCATCATC ATCATTGTCGTCATCATCACCAAAGGAGCTCGTCGTCATTAGGCCGGCCA CCAGCTAAACGGCATTGAGAAAACTCAGCAGCACCTTGTCATCCAAGTCT TGATCTTCGTCTTGGTCTGGATATCCGTATCCAATCACACAGTTCAGTTA TGTCCTCGACCGCCGGAAAGCGCAAGGAGATCTACAAATATCTCGCGCCA TGGCCACTGTACTCCATGAACTGGAGTGTAAGGCCGGACAAGCGATTCCG GCTCGCACTGGGCAGCTTCATCGAGGAGTACAACAACAAGGTACAGATCA TCAGCCTGGACGAGGACACCAGCGAATTTAGTGCTAAGAGCACCTTTGAT CATCCATATCCGACAACCAAGATCATGTGGATCCCGGACTCCAAGGGTGT CTATCCGGATCTGTTGGCCACCAGTGGCGACTACTTGCGGGTGTGGCGTG CCGGGGAACCGGACACGCGGCTCGAGTGCGTACTGAATAACAACAAGAAC AGCGACTTTTGCGCTCCCCTCACTTCGTTTGATTGGAACGAGGTGGATCC CAATCTGGTGGGAACCTCATCGATAGACACAACCTGCACTATCTGGGGAC TGGAGACCGGACAGCCGCACGCTCGCGTCTATGTGGCAGGACACGTGAAG ACGCAATTGATTGCCCATGACAAGGAAGTATACGACATTGCTTTTTCGCG GGCCGGCGGCGGTCGGGACATGTTTGCCTCGGTGGGAGCGGACGGGTCGG TGCGCATGTTTGATCTGCGGCACTTGGAGCACTCGACCATTATATATGAG GATCCTGCTCATACGGCGCTGCTGCGCTTGGCCTGGAACAAACAGGACCC GAACTACTTAGCCACCGTTGCCATGGACTCGTGCGAAGTAATAATTTTAG ATGTTCGTGTTCCTTGTACACCCGTTGCAAGACTGAGCAATCACAGAGCG TGCGTCAACGGTATTGCGTGGGCGCCGCATAGTTCCTGTCACATCTGCAC TGCCGGTGATGATCACCAAGCACTGATCTGGGATATACAACAAATGCCAC GTGCAATCGAGGATCCAATTTTAGCCTATACAGCTGCCGAGGGCGAAGTC AATCAGATTCAGTGGGGTGCCACACAGCCCGACTGGATAGCCATTTGCTA TAACAAAGCGTGCGAGATCCTGCGGGTCTAAGTAATTTTTTTTGGTCTGG TCCTTGCTGAAGCACCTGACTGCAATTGCTGAACAACGCACAGTCAACAA AGAAGCAAGTCAGAAAAACACACAACACCCACAAATAAACATACATTTGC TGTTGGTAACTTGGAAGCGGAAAGCAGTGAGCTTAAGTTGGATTAGTTCT GTCAACACGCGTCCGCAGTTTGTTTAATTTTACTGTCTGTCGAGAGAGAG AAAATGTGAAAGTGACGGATATAGAGGCAGAGAAATGGAAAGAGAAAGGG CTTAAAAGAAAGATATGAGTTTGAGGGAAAGAGAAGAGGACGAAGCACTT ATTCTAGAATTCTTAGCTGAGTTGATCTAACAAGTATGTAATTATATAAG GTATAACCAAAATATGTTTTATAATTGTAGTTTATTTCACACTTGACAAA TCCCGACACTCACACCCCCGAAAACTCCAATCAATTAGAGCCGCTTAATC TTTTTTATTTCGTTTTTATACGAACCCAAATGGAATGCAGAAGAAAAAGA AATCATATTTATTATAACACAATGTCCTACCTCGTTTTTTCAAACATGAA TGCTGTTAATCGAGTTTTCGAGTCTGGTCAAAACAGCAACAACCACAAAA ATACACAGAGAACAAAAAATGAGAGGTAAAAAAGTAGCCGGCAACAACGC TTTTTCGAAATATTTTTACTTTGTTCGATTTTTGTAACAGATCCAAAAAA CGGAAAAACGACAAAAACAAGAGATAAAGAAAAACAAAAGCAAAACCATG GACTTAAGCAATTGCAAAACAAACATAATATGAAATGAATTAAAGAAATA AGCGAAATACTTACATAGATTAAAGATTAAAAACCAAACCAGGAAACTGA TGACGAACTGCACACAACACAGCTAGAATACAATACTATTTAAAGATACA AACTAAAAGATAAAACAAATACCGAAATATATGAGCGAGAGAGAATACAA GATTGTTGCTATATCCATTTAACAAACGAGCGAAAATAAGCAAACAAACT ATGATCATTTCAGATAAGACACGACCCTCCATCAATAATCTCAAATCTTA ACCACATCCCATACTTTCCACAGGACAAAGCGACTTTTTCAGATAAAATC GAATACATTTTTTTATGTATCTTGTAATTTATAGCAATTTCACAACTTAT ATATAAATATGTATACAGAAAGCGATAGCAGTAATAATAATCCCGATGAT CGTGTATTGTAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 21847966..21849396 | 3010..1581 | 7105 | 99.9 | Minus |
chrX | 22417052 | chrX | 21850628..21851374 | 747..1 | 3735 | 100 | Minus |
chrX | 22417052 | chrX | 21849696..21850158 | 1401..939 | 2315 | 100 | Minus |
chrX | 22417052 | chrX | 21850360..21850555 | 940..745 | 980 | 100 | Minus |
chrX | 22417052 | chrX | 21849457..21849640 | 1582..1399 | 920 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 22451997..22453430 | 3013..1581 | 7120 | 99.9 | Minus |
X | 23542271 | X | 22454662..22455408 | 747..1 | 3735 | 100 | Minus |
X | 23542271 | X | 22453730..22454192 | 1401..939 | 2315 | 100 | Minus |
X | 23542271 | X | 22454394..22454589 | 940..745 | 980 | 100 | Minus |
X | 23542271 | X | 22453491..22453674 | 1582..1399 | 920 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 22437089..22438522 | 3013..1581 | 7130 | 99.9 | Minus |
X | 23527363 | X | 22439754..22440500 | 747..1 | 3735 | 100 | Minus |
X | 23527363 | X | 22438822..22439284 | 1401..939 | 2315 | 100 | Minus |
X | 23527363 | X | 22439486..22439681 | 940..745 | 980 | 100 | Minus |
X | 23527363 | X | 22438583..22438766 | 1582..1399 | 920 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 828..1052 | 2566..2798 | 172 | 56.4 | Plus |
Porto1 | 4682 | Porto1 DOC5 4682bp | 4359..4504 | 2573..2725 | 152 | 61 | Plus |
McClintock | 6450 | McClintock McCLINTOCK 6450bp | 5677..5853 | 2566..2730 | 136 | 59.2 | Plus |
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 627..674 | 1849..1895 | 120 | 75 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 21847966..21849394 | 1583..3010 | 99 | <- | Minus |
chrX | 21849457..21849638 | 1401..1582 | 100 | <- | Minus |
chrX | 21849697..21850156 | 941..1400 | 100 | <- | Minus |
chrX | 21850360..21850552 | 748..940 | 100 | <- | Minus |
chrX | 21850628..21851374 | 1..747 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14614-RA | 1..1032 | 750..1781 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14614-RB | 1..1032 | 750..1781 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14614-RC | 1..1032 | 750..1781 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wap-RB | 1..1032 | 750..1781 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14614-RA | 21..2763 | 1..2743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14614-RA | 21..3031 | 1..3010 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14614-RA | 15..3025 | 1..3010 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wap-RA | 15..3025 | 1..3010 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22452000..22453428 | 1583..3010 | 99 | <- | Minus |
X | 22453491..22453672 | 1401..1582 | 100 | <- | Minus |
X | 22453731..22454190 | 941..1400 | 100 | <- | Minus |
X | 22454394..22454586 | 748..940 | 100 | <- | Minus |
X | 22454662..22455408 | 1..747 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22452000..22453428 | 1583..3010 | 99 | <- | Minus |
X | 22453491..22453672 | 1401..1582 | 100 | <- | Minus |
X | 22453731..22454190 | 941..1400 | 100 | <- | Minus |
X | 22454394..22454586 | 748..940 | 100 | <- | Minus |
X | 22454662..22455408 | 1..747 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22452000..22453428 | 1583..3010 | 99 | <- | Minus |
X | 22453491..22453672 | 1401..1582 | 100 | <- | Minus |
X | 22453731..22454190 | 941..1400 | 100 | <- | Minus |
X | 22454394..22454586 | 748..940 | 100 | <- | Minus |
X | 22454662..22455408 | 1..747 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 21853836..21855264 | 1583..3010 | 99 | <- | Minus |
arm_X | 21855327..21855508 | 1401..1582 | 100 | <- | Minus |
arm_X | 21855567..21856026 | 941..1400 | 100 | <- | Minus |
arm_X | 21856230..21856422 | 748..940 | 100 | <- | Minus |
arm_X | 21856498..21857244 | 1..747 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22437092..22438520 | 1583..3010 | 99 | <- | Minus |
X | 22438583..22438764 | 1401..1582 | 100 | <- | Minus |
X | 22438823..22439282 | 941..1400 | 100 | <- | Minus |
X | 22439486..22439678 | 748..940 | 100 | <- | Minus |
X | 22439754..22440500 | 1..747 | 100 | Minus |
Translation from 749 to 1780
> LD15927.pep MSSTAGKRKEIYKYLAPWPLYSMNWSVRPDKRFRLALGSFIEEYNNKVQI ISLDEDTSEFSAKSTFDHPYPTTKIMWIPDSKGVYPDLLATSGDYLRVWR AGEPDTRLECVLNNNKNSDFCAPLTSFDWNEVDPNLVGTSSIDTTCTIWG LETGQPHARVYVAGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGS VRMFDLRHLEHSTIIYEDPAHTALLRLAWNKQDPNYLATVAMDSCEVIIL DVRVPCTPVARLSNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP RAIEDPILAYTAAEGEVNQIQWGATQPDWIAICYNKACEILRV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21273-PA | 343 | GF21273-PA | 1..343 | 1..343 | 1854 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17516-PA | 343 | GG17516-PA | 1..343 | 1..343 | 1854 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17806-PA | 343 | GH17806-PA | 1..343 | 1..343 | 1845 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wap-PD | 343 | CG14614-PD | 1..343 | 1..343 | 1861 | 100 | Plus |
wap-PC | 343 | CG14614-PC | 1..343 | 1..343 | 1861 | 100 | Plus |
wap-PB | 343 | CG14614-PB | 1..343 | 1..343 | 1861 | 100 | Plus |
wap-PA | 343 | CG14614-PA | 1..343 | 1..343 | 1861 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15149-PA | 343 | GI15149-PA | 1..343 | 1..343 | 1845 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13429-PA | 420 | GL13429-PA | 78..420 | 1..343 | 1858 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13113-PA | 420 | GA13113-PA | 78..420 | 1..343 | 1858 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11725-PA | 294 | GM11725-PA | 1..266 | 1..266 | 1435 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24427-PA | 343 | GD24427-PA | 1..343 | 1..343 | 1854 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19008-PA | 343 | GJ19008-PA | 1..343 | 1..343 | 1845 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16186-PA | 343 | GK16186-PA | 1..343 | 1..343 | 1847 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15271-PA | 343 | GE15271-PA | 1..343 | 1..343 | 1854 | 100 | Plus |
Translation from 749 to 1780
> LD15927.hyp MSSTAGKRKEIYKYLAPWPLYSMNWSVRPDKRFRLALGSFIEEYNNKVQI ISLDEDTSEFSAKSTFDHPYPTTKIMWIPDSKGVYPDLLATSGDYLRVWR AGEPDTRLECVLNNNKNSDFCAPLTSFDWNEVDPNLVGTSSIDTTCTIWG LETGQPHARVYVAGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGS VRMFDLRHLEHSTIIYEDPAHTALLRLAWNKQDPNYLATVAMDSCEVIIL DVRVPCTPVARLSNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP RAIEDPILAYTAAEGEVNQIQWGATQPDWIAICYNKACEILRV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wap-PD | 343 | CG14614-PD | 1..343 | 1..343 | 1861 | 100 | Plus |
wap-PC | 343 | CG14614-PC | 1..343 | 1..343 | 1861 | 100 | Plus |
wap-PB | 343 | CG14614-PB | 1..343 | 1..343 | 1861 | 100 | Plus |
wap-PA | 343 | CG14614-PA | 1..343 | 1..343 | 1861 | 100 | Plus |