Clone LD15933 Report

Search the DGRC for LD15933

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:159
Well:33
Vector:pBS SK-
Associated Gene/TranscriptSxl-RP
Protein status:LD15933.pep: gold
Preliminary Size:3909
Sequenced Size:4077

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG18350 2001-01-01 Release 2 assignment
CG14425 2001-01-01 Release 2 assignment
CG33070 2003-01-01 Sim4 clustering to Release 3
CG33070 2003-02-05 Blastp of sequenced clone
Sxl 2008-04-29 Release 5.5 accounting
Sxl 2008-08-15 Release 5.9 accounting
CG14425 2008-08-15 Release 5.9 accounting
Sxl 2008-12-18 5.12 accounting
CG14425 2008-12-18 5.12 accounting

Clone Sequence Records

LD15933.complete Sequence

4077 bp (4077 high quality bases) assembled on 2003-02-05

GenBank Submission: BT003583

> LD15933.complete
CCGAAGAAGGAAAGTCGCGCAGTGAATTTTTTTCTGCGCGCCTACAAGAA
CAGCTATAATAAGCACACACTTAAAAAAAACCCCATAGGACTTAAGAGAG
GAAAGCACAGTGAGCGTGCACACATGTAAAAAGAGAAAGAGAGCAACAGC
AATTTTAGTACAACACAAGAAAGTTGAACAGAGGCAGAAGAGAAGTAACA
GGAAAACAATAACAACGACAGCAGCAGGCCAGCTGAGAGCGCTGAGCGCC
AAAACAATTGAAGAGATCGATTGAATCTCGATCATCGTTCTTAACCTCAA
GTCAACTGCAACTCACCTCATCATCCTTTTCCTGTAAAACCGAAACTCAC
CTTCGATCGAGGGTGTAACTTTTGTTGATTCGAAAAACACACTCCCAACT
CTCAGGATATGTACGGCAACAATAATCCGGGTAGTAACAATAATAATGGT
GGTTATCCCCCATATGGCTACAACAACAAGTCGAGTGGTGGGCGTGGATT
TGGGATGTCCCATTCTCTGCCATCCGGAATGTCACGTTATGCGTTCTCGC
CACAGGATACAGAATTTTCATTTCCAAGTTCATCGTCGCGTCGTGGTTAC
AATGATTTCCCCGGCTGCGGCGGCAGCGGCGGAAATGGTGGGAGTGCCAA
CAATTTAGGGGGCGGCAACATGTGCCACCTGCCGCCGATGGCCAGCAACA
ACTCGCTGAATAATCTCTGCGGATTGTCGCTGGGCAGCGGTGGTAGTGAT
GATCTCATGAACGATCCTCGGGCAAGCAACACCAACCTGATTGTCAACTA
CTTGCCCCAGGACATGACCGATCGCGAGCTGTACGCCCTATTCAGAGCCA
TTGGACCCATCAACACGTGCAGAATCATGCGAGACTATAAGACTGGCTAC
AGTTTTGGTTATGCTTTCGTGGACTTCACATCGGAAATGGACTCGCAGCG
TGCTATTAAAGTGCTGAATGGCATCACAGTGCGCAACAAGCGGCTTAAGG
TTTCCTATGCACGTCCCGGCGGAGAATCGATCAAGGACACCAATCTGTAT
GTGACCAATCTGCCGCGTACCATAACCGACGATCAGCTGGACACGATCTT
CGGCAAGTACGGTTCCATTGTGCAGAAGAACATCTTGCGTGACAAGCTCA
CAGGTCGTCCTCGTGGTGTGGCCTTTGTTCGGTACAACAAGCGTGAGGAG
GCCCAGGAGGCCATTTCGGCGCTGAACAACGTAATACCCGAGGGCGGATC
ACAGCCGCTGTCCGTCCGGTTGGCTGAGGAGCATGGCAAGGCGAAGGCGG
CCCACTTTATGTCGCAGATGGGCGTGGTTCCAGCAAATGTACCACCGCCG
CCACCACAACCGCCAGCACATATGGCCGCCGCATTCAACATGATGCACAG
AGGCGAAAACTTTGCCGATTTGCTTGACGGATTGTACCGTAGGAAGTACC
ATTATCCTTACTTATAATTGACACCGCAACAGCAGCAGCAACTACTACAA
CATCAGCAGCAGGCGTTGGGCTTCACCAGTAGCTCCAATAATAGTATTGG
CAATGGTAATGGCAACGACAACAACATGCTACTTTACCACCAGCAATACC
ATCAACAACAAACACAACAACAACGCCTGGGCAATGTTGCTGCTCACAAT
ATAAGTCCAAATGGAAGCAATAATAACATTAACACGTCGAACACCAATAA
CATTAACTTCAATACAATACGTCAGAATGGAGTTGCTGCTCTTCACTATC
TTCAGGAACAATTGCAATTGCAACAACCGCAGGATCAACAATCACAGCAA
CAGCAGCCATTGACTATGCCATCTTCGCCGCCGTTTCAACAACAATCACG
CCAATCACACCACAATGGCAGCAGTAGCACTCTGGGCAATCAGTTGCTTG
CCATAAGCAACAACAATAGCTTCAATAATAATTCCAATCAATCCAATAGT
TTTACTGGCAATTACAGCAACGGTAGCGCTTTTACCAGTAACGGTGCCAT
TAGCGGTAGCAACTTTCCCAACAATCCCACAAGCAGTGGGAACTTCACCA
ACAACTCAACAAACAGCAACCCCACAAACAGTGGACACTTTGCCAGTAAT
TTGGCTGGCAGCAGCAACTTTACCAACCATCTTTCTGGCAGCAACAATTA
CACCAACAGCAACGGAAATTTCACCAGTAATGCAGCTAGCAGTAGCAACT
TCTCCAACAATGCAGCTAGCAGCACCAATTACAGCAAGAACTGCAGCAGC
GGCGTCGTTGGAAACAGCGATCCCGACAGTTGTAGCAGAAAACACACCAC
CAACACTAATAATCACCACACTTCGCCGCAGCACGACTTCAGTTTTAATA
TGTCAACGACTGAACAAGAACTGCATCAGCAGACACTCAAGTTGCAGCAG
CTGCATCTGAACAACAGCTTCAACAACACCACAGCAGCTGCAACAACTTC
AGCGGCTGCATCAACTTCCACTTCAACAACGGCAACGGCATCATCCACAA
ACTCCGCAAATGTCGGATTTTTATGGCGTACATAACCAGAGAGTTGAGAA
GCGTATGATGAAGGCAATCTTCAAATTAAAGATTATATATAAAAAGCTTA
TATATATAAAACTATGAATACCTTATATTGATCATCGTAGTATCAGCATT
CATCGAAACCATATACAACAACTGAAACTTTTATGTTCTCAAACCACAAG
AATTAATTTACTACTTTTTTTTTTTTTGTATGTTCCTCACTTTAACCCAT
ATGTTGTAGTTGGTTTTTTGTGCTTTTTTTTTGGGAGGAATCCTGTTGTA
ACTAGCTCTAAGGCAAGACACGTATATGTATACAAATCATAAATAATTAT
ATATATATACATATATATATATATATATATAAAGAATGAAAAATCGACGA
AGATTTTTTTTTTGCTTAAACTTAGAGAAAAAACCTATGAGAAATACATT
TTTTTGTCACATATTTATAACGTATAATCATAACGAAAACGACAAAATAT
ATTATACAAACACACATATATATCTATACTATATAACATACTTATAGGCG
TGATGAAATAAGCTCCGATTGTTTTTTTTTTTTCTGTCTGAAACTGATTT
TTTTGGCGCGAACTATGCCGCAACAATGTACACGGTCATCGTGTATGTTT
ATAGCTGAAGTTAATCCAGATATATGAATATATATATTATTTTTTTTCAT
AATTTATAAATCCAATTTTTTTGTCTATATTATACGTAACGAAACGGCTA
AAATGACTGGACATGCTCAAGTTTTCAGGCTGTTTATTCATAACATATAA
AACGAAAACATACAACTTAGCTAGCAGTATGCTTGAGTAGGCGAAGGAGA
AAGAGAATCAGACAAAATTACAATACAAACCCAATTTTTTTCATAGCTAT
AATGAATATGTTTTTTTTTTTTTAATAAGTATAAAAACTTTTCTTGAAAT
CCATTTTTTTTTATTAGTTTAATTAACGAAACAACTTGAGCATGTAACAG
CAAGAAAAACAAAAGTAACATTCAAAAAGCGACTAACAAAGAAACGTGAT
AAATAGCCCGTCAAAACGAAAATCAGAGGAACCGAATGGGAAAGGTAAAA
GAAAAAAATAGAGACACAATCGAAAGTAACGAAAGAGAAACACGTCAAAT
CACAGGAGTGACTTGGTTTGATTGCCTAAAAAACGCATGGATAACGTTTT
AACTTTTAATTTGCCTAACACACTTTTCGAAATTCTAAATTGGCCAGTCA
CTCCTTCTGCAGGCAAAAAATATTTTTTCGGTGTAGGTACATAAGTAAAT
GAAACAGAAACATTATTTTGTTACTACAATATATGCGATGATCCTTTTTT
GCAAAATTCTATCAATACTTTTATGAATATACTTTTATAATCAAACAAAA
AATTGTGAAAAAATTTTAATTTGTTAAAAAACAGAAGAAAAAATCAGAAT
TTCAATTTTATTTTATTATTTTATTACCATGGCTTAAAACAAATCATACA
AGGAAATAAGAAAAACCATTATTTAAGGAAACTTAATAAACATTTTCGAC
ACAAACCACAAAAAAAAAAAAAAAAAA

LD15933.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:23:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG14425-RB 4060 CG14425-RB 1..4060 1..4059 20260 99.9 Plus
Sxl-RP 4060 Sxl-RP 1..4060 1..4059 20260 99.9 Plus
Sxl-RH 5164 Sxl-RH 1462..4120 1403..4060 13255 99.9 Plus
Sxl-RH 5164 Sxl-RH 548..1395 555..1402 4240 100 Plus
Sxl-RH 5164 Sxl-RH 18..548 1..531 2655 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:23:48
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 6968672..6971330 4059..1401 13185 99.9 Minus
chrX 22417052 chrX 6983637..6984086 485..36 2250 100 Minus
chrX 22417052 chrX 6977582..6977942 891..531 1805 100 Minus
chrX 22417052 chrX 6976561..6976783 1403..1181 1115 100 Minus
chrX 22417052 chrX 6977119..6977304 1183..998 930 100 Minus
chrX 22417052 chrX 6977371..6977482 1001..890 560 100 Minus
chrX 22417052 chrX 6979577..6979624 531..484 240 100 Minus
chrX 22417052 chrX 1265596..1265702 780..886 205 79.4 Plus
chrX 22417052 chrX 1266395..1266531 1183..1319 205 76.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:03:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:23:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7076709..7079369 4060..1401 13255 100 Minus
X 23542271 X 7091674..7092123 485..36 2250 100 Minus
X 23542271 X 7085619..7085979 891..531 1805 100 Minus
X 23542271 X 7084598..7084820 1403..1181 1115 100 Minus
X 23542271 X 7085156..7085341 1183..998 930 100 Minus
X 23542271 X 7085408..7085519 1001..890 560 100 Minus
X 23542271 X 7087614..7087661 531..484 240 100 Minus
X 23542271 X 1371663..1371769 780..886 205 79.4 Plus
X 23542271 X 1372462..1372598 1183..1319 205 76.6 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:01:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 7084807..7087467 4060..1401 13265 99.9 Minus
X 23527363 X 7099772..7100221 485..36 2250 100 Minus
X 23527363 X 7093717..7094077 891..531 1805 100 Minus
X 23527363 X 7092696..7092918 1403..1181 1115 100 Minus
X 23527363 X 7093254..7093439 1183..998 930 100 Minus
X 23527363 X 7093506..7093617 1001..890 560 100 Minus
X 23527363 X 7095712..7095759 531..484 240 100 Minus
X 23527363 X 1379761..1379867 780..886 205 79.4 Plus
X 23527363 X 7106099..7106134 36..1 180 100 Minus
Blast to na_te.dros performed 2019-03-15 18:23:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2268..2899 1862..2508 415 56.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2297..3121 1466..2315 370 55.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2369..2686 2138..2466 339 59.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2989 1588..2245 337 56.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2343..2873 1753..2270 326 56.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2295..2816 1996..2509 284 55.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..7036 1477..1800 279 59.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2295..2999 1764..2482 264 54 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2304..2540 2210..2464 259 61.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2406..2983 1477..2080 256 56.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..7025 2145..2471 251 58.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2499..2989 1477..1948 241 55.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..7096 2108..2464 234 56.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6752..6896 1477..1624 228 63.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6773..6914 1477..1624 222 63.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2752..2995 1436..1684 217 58.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..7033 2010..2342 215 55.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6794..7404 1477..2098 202 55.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2423..2981 1473..2024 184 53.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 7154..7425 2226..2490 180 56 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6639..6951 1915..2231 176 54.4 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3280..3532 1466..1715 170 56.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2624..3199 1471..2069 169 54.1 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 6592..6690 1475..1575 166 65.3 Plus
TART-C 11124 TART-C TARTC 11124bp 8048..8146 1475..1575 166 65.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6740..6897 1753..1915 163 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6773..6900 1753..1879 160 59.4 Plus
roo 9092 roo DM_ROO 9092bp 1064..1169 2151..2256 151 65.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6761..6924 1753..1921 147 58.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6529..6950 1767..2202 144 52.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6827..6951 1477..1601 139 59.1 Plus
roo 9092 roo DM_ROO 9092bp 1130..1163 1474..1507 134 88.2 Plus
gypsy9 5349 gypsy9 GYPSY9 5349bp 533..573 3276..3316 133 80.5 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 120..176 2433..2489 132 70.2 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 9150..9206 2433..2489 132 70.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2816..2967 1473..1624 131 57.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1550..1587 1473..1510 127 81.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2447..2484 1473..1510 127 81.6 Plus
roo 9092 roo DM_ROO 9092bp 1111..1146 1476..1511 126 83.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1530..1584 1753..1807 122 69.1 Plus
1360 3409 1360 1360 3409bp 2732..2812 2868..2946 121 63 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6869..7019 1477..1621 119 58.2 Plus

LD15933.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:24:30 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 6968672..6971328 1403..4059 99 <- Minus
chrX 6976562..6976782 1182..1402 100 <- Minus
chrX 6977121..6977302 1000..1181 100 <- Minus
chrX 6977373..6977480 892..999 100 <- Minus
chrX 6977582..6977941 532..891 100 <- Minus
chrX 6979577..6979622 486..531 100 <- Minus
chrX 6983637..6984085 37..485 100 <- Minus
chrX 6989975..6990010 1..36 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:32:42 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
Sxl-RD 1..995 409..1403 100 == Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:53:35 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
Sxl-RP 1..1059 409..1467 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:01:51 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
Sxl-RY 1..2127 409..2535 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:44:40 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
Sxl-RD 1..995 409..1403 100 == Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:01:11 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
Sxl-RY 1..2127 409..2535 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:32:41 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
Sxl-RM 18..496 1..479 100 -> Plus
Sxl-RM 689..737 480..530 90 == Plus
Sxl-RM 738..1588 555..1403 99 -> Plus
Sxl-RM 1653..4309 1404..4059 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:53:35 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
CG14425-RB 1..4060 1..4059 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:01:51 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
Sxl-RP 1..4060 1..4059 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:44:40 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
CG14425-RA 18..547 1..530 100 == Plus
CG14425-RA 548..1398 555..1403 99 -> Plus
CG14425-RA 1463..4119 1404..4059 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:01:11 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
Sxl-RP 1..4060 1..4059 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:24:30 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
X 7076710..7079367 1403..4059 99 <- Minus
X 7084599..7084819 1182..1402 100 <- Minus
X 7085158..7085339 1000..1181 100 <- Minus
X 7085410..7085517 892..999 100 <- Minus
X 7085619..7085978 532..891 100 <- Minus
X 7087614..7087659 486..531 100 <- Minus
X 7091674..7092122 37..485 100 <- Minus
X 7098001..7098036 1..36 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:24:30 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
X 7076710..7079367 1403..4059 99 <- Minus
X 7084599..7084819 1182..1402 100 <- Minus
X 7085158..7085339 1000..1181 100 <- Minus
X 7085410..7085517 892..999 100 <- Minus
X 7085619..7085978 532..891 100 <- Minus
X 7087614..7087659 486..531 100 <- Minus
X 7091674..7092122 37..485 100 <- Minus
X 7098001..7098036 1..36 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:24:30 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
X 7076710..7079367 1403..4059 99 <- Minus
X 7084599..7084819 1182..1402 100 <- Minus
X 7085158..7085339 1000..1181 100 <- Minus
X 7085410..7085517 892..999 100 <- Minus
X 7085619..7085978 532..891 100 <- Minus
X 7087614..7087659 486..531 100 <- Minus
X 7091674..7092122 37..485 100 <- Minus
X 7098001..7098036 1..36 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:01:51 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6970743..6973400 1403..4059 99 <- Minus
arm_X 6978632..6978852 1182..1402 100 <- Minus
arm_X 6979191..6979372 1000..1181 100 <- Minus
arm_X 6979443..6979550 892..999 100 <- Minus
arm_X 6979652..6980011 532..891 100 <- Minus
arm_X 6981647..6981692 486..531 100 <- Minus
arm_X 6985707..6986155 37..485 100 <- Minus
arm_X 6992034..6992069 1..36 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:15:34 Download gff for LD15933.complete
Subject Subject Range Query Range Percent Splice Strand
X 7095712..7095757 486..531 100 <- Minus
X 7084808..7087465 1403..4059 99 <- Minus
X 7092697..7092917 1182..1402 100 <- Minus
X 7093256..7093437 1000..1181 100 <- Minus
X 7093508..7093615 892..999 100 <- Minus
X 7093717..7094076 532..891 100 <- Minus
X 7099772..7100220 37..485 100 <- Minus
X 7106099..7106134 1..36 100   Minus

LD15933.pep Sequence

Translation from 408 to 1466

> LD15933.pep
MYGNNNPGSNNNNGGYPPYGYNNKSSGGRGFGMSHSLPSGMSRYAFSPQD
TEFSFPSSSSRRGYNDFPGCGGSGGNGGSANNLGGGNMCHLPPMASNNSL
NNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGP
INTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY
ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGR
PRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAAHF
MSQMGVVPANVPPPPPQPPAHMAAAFNMMHRGENFADLLDGLYRRKYHYP
YL*

LD15933.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:03:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20968-PA 379 GF20968-PA 16..379 16..352 1364 84.6 Plus
Dana\GF21012-PA 757 GF21012-PA 104..287 121..304 784 78.8 Plus
Dana\GF18529-PA 417 GF18529-PA 139..311 122..294 439 48 Plus
Dana\GF14992-PA 660 GF14992-PA 95..267 119..289 424 43.8 Plus
Dana\GF21392-PA 353 GF21392-PA 15..205 112..289 415 42 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:03:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17637-PA 335 GG17637-PA 1..335 33..352 1323 88.3 Plus
Dere\GG12847-PA 513 GG12847-PA 97..280 121..304 786 78.8 Plus
Dere\GG24901-PA 446 GG24901-PA 109..281 119..289 417 43.8 Plus
Dere\GG12756-PA 466 GG12756-PA 132..314 112..293 415 42.1 Plus
Dere\GG17743-PA 353 GG17743-PA 15..205 112..289 412 41.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:03:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24172-PA 365 GH24172-PA 16..365 16..352 1481 84.7 Plus
Dgri\GH12116-PA 918 GH12116-PA 177..358 119..300 742 75.8 Plus
Dgri\GH13638-PA 726 GH13638-PA 110..277 119..289 433 44.4 Plus
Dgri\GH24423-PA 353 GH24423-PA 15..205 112..289 412 41.5 Plus
Dgri\GH12602-PA 511 GH12602-PA 162..359 110..293 393 38.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:45
Subject Length Description Subject Range Query Range Score Percent Strand
Sxl-PY 708 CG43770-PY 1..352 1..352 1886 100 Plus
Sxl-PP 352 CG43770-PP 1..352 1..352 1886 100 Plus
Sxl-PW 344 CG43770-PW 1..344 1..352 1825 97.7 Plus
Sxl-PX 722 CG43770-PX 1..366 1..352 1786 91.7 Plus
Sxl-PH 366 CG43770-PH 1..366 1..352 1786 91.7 Plus
Sxl-PT 354 CG43770-PT 1..334 1..334 1774 99.4 Plus
Sxl-PD 354 CG43770-PD 1..334 1..334 1774 99.4 Plus
Sxl-PL 354 CG43770-PL 1..334 1..334 1774 99.4 Plus
Sxl-PJ 346 CG43770-PJ 1..326 1..334 1713 97 Plus
Sxl-PG 346 CG43770-PG 1..326 1..334 1713 97 Plus
Sxl-PR 342 CG43770-PR 18..342 21..352 1678 96.7 Plus
Sxl-PO 364 CG43770-PO 18..364 21..352 1639 90.4 Plus
Sxl-PAC 331 CG43770-PAC 4..311 27..334 1619 99.4 Plus
Sxl-PAB 322 CG43770-PAB 1..302 33..334 1584 99.3 Plus
Sxl-PC 344 CG43770-PC 18..324 21..334 1566 95.9 Plus
Sxl-PN 344 CG43770-PN 18..324 21..334 1566 95.9 Plus
Sxl-PE 314 CG43770-PE 1..294 33..334 1523 96.7 Plus
Sxl-PA 314 CG43770-PA 1..294 33..334 1523 96.7 Plus
ssx-PE 443 CG3056-PE 48..296 72..321 786 63.4 Plus
ssx-PB 443 CG3056-PB 48..296 72..321 786 63.4 Plus
ssx-PD 485 CG3056-PD 48..296 72..321 786 63.4 Plus
Rbp9-PH 439 CG3151-PH 58..281 73..296 438 37.9 Plus
Rbp9-PG 439 CG3151-PG 58..281 73..296 438 37.9 Plus
Rbp9-PF 439 CG3151-PF 58..281 73..296 438 37.9 Plus
Rbp9-PE 439 CG3151-PE 58..281 73..296 438 37.9 Plus
Rbp9-PJ 684 CG3151-PJ 58..281 73..296 438 37.9 Plus
Rbp9-PK 444 CG3151-PK 58..286 73..296 422 37.1 Plus
Rbp9-PI 444 CG3151-PI 58..286 73..296 422 37.1 Plus
Rbp9-PB 444 CG3151-PB 58..286 73..296 422 37.1 Plus
Rbp9-PC 444 CG3151-PC 58..286 73..296 422 37.1 Plus
fne-PJ 353 CG4396-PJ 13..214 110..298 406 39.7 Plus
fne-PI 353 CG4396-PI 13..214 110..298 406 39.7 Plus
fne-PD 353 CG4396-PD 13..214 110..298 406 39.7 Plus
fne-PE 356 CG4396-PE 13..217 110..298 403 39.1 Plus
fne-PH 356 CG4396-PH 13..217 110..298 403 39.1 Plus
fne-PG 356 CG4396-PG 13..217 110..298 403 39.1 Plus
fne-PB 356 CG4396-PB 13..217 110..298 403 39.1 Plus
fne-PA 356 CG4396-PA 13..217 110..298 403 39.1 Plus
fne-PC 356 CG4396-PC 13..217 110..298 403 39.1 Plus
elav-PC 479 CG4262-PC 118..327 92..293 382 37.5 Plus
elav-PB 479 CG4262-PB 118..327 92..293 382 37.5 Plus
elav-PA 483 CG4262-PA 122..331 92..293 382 37.5 Plus
elav-PD 483 CG4262-PD 122..331 92..293 382 37.5 Plus
CG5213-PA 251 CG5213-PA 41..231 125..315 355 38.7 Plus
shep-PA 578 CG32423-PA 180..394 73..296 229 30.2 Plus
shep-PF 590 CG32423-PF 192..406 73..296 229 30.2 Plus
shep-PE 379 CG32423-PE 19..195 123..296 225 35.2 Plus
shep-PG 379 CG32423-PG 19..195 123..296 225 35.2 Plus
shep-PH 371 CG32423-PH 19..193 123..296 222 35.4 Plus
shep-PI 377 CG32423-PI 19..193 123..296 222 35.4 Plus
shep-PB 499 CG32423-PB 85..308 73..296 222 30.6 Plus
Rbp9-PH 439 CG3151-PH 84..264 4..193 156 29.5 Plus
Rbp9-PG 439 CG3151-PG 84..264 4..193 156 29.5 Plus
Rbp9-PF 439 CG3151-PF 84..264 4..193 156 29.5 Plus
Rbp9-PE 439 CG3151-PE 84..264 4..193 156 29.5 Plus
Rbp9-PJ 684 CG3151-PJ 84..264 4..193 156 29.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:03:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21573-PA 367 GI21573-PA 16..367 16..352 1493 85.8 Plus
Dmoj\GI16327-PA 716 GI16327-PA 246..443 121..322 770 75.2 Plus
Dmoj\GI11879-PA 724 GI11879-PA 121..293 119..289 423 43.8 Plus
Dmoj\GI16282-PA 353 GI16282-PA 13..205 110..289 412 41 Plus
Dmoj\GI10157-PA 356 GI10157-PA 31..196 125..290 390 45.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:03:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26885-PA 377 GL26885-PA 16..377 16..352 1410 85.2 Plus
Dper\GL14245-PA 618 GL14245-PA 114..299 119..304 740 72.6 Plus
Dper\GL26299-PA 678 GL26299-PA 107..274 119..289 438 45 Plus
Dper\GL22975-PA 385 GL22975-PA 15..205 112..289 412 41.5 Plus
Dper\GL20165-PA 496 GL20165-PA 153..344 109..293 387 39.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22653-PA 377 GA22653-PA 16..377 16..352 1410 85.2 Plus
Dpse\GA22715-PA 672 GA22715-PA 113..298 118..303 738 72.6 Plus
Dpse\GA28809-PA 692 GA28809-PA 116..288 119..289 421 43.8 Plus
Dpse\GA22283-PA 353 GA22283-PA 15..205 112..289 412 41.5 Plus
Dpse\GA18065-PA 496 GA18065-PA 153..344 109..293 386 39.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\Sxl-PA 301 GM17480-PA 1..290 1..298 1474 95.6 Plus
Dsec\GM19131-PA 488 GM19131-PA 89..272 121..304 780 78.8 Plus
Dsec\GM18380-PA 650 GM18380-PA 313..485 119..289 418 43.8 Plus
Dsec\GM19036-PA 466 GM19036-PA 132..314 112..293 414 42.1 Plus
Dsec\GM11591-PA 379 GM11591-PA 41..231 112..289 406 40.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\Sxl-PA 301 GD16165-PA 1..301 1..352 1347 78.4 Plus
Dsim\GD16553-PA 226 GD16553-PA 89..226 121..258 574 77.5 Plus
Dsim\GD16475-PA 466 GD16475-PA 132..314 112..293 414 42.1 Plus
Dsim\GD17091-PA 371 GD17091-PA 13..219 110..300 413 39.2 Plus
Dsim\GD23195-PA 464 GD23195-PA 312..460 119..265 369 45.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:03:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Sxl-PA 368 GJ16698-PA 16..368 16..352 1499 85.8 Plus
Dvir\ssx-PA 428 GJ15667-PA 26..197 134..305 722 79.7 Plus
Dvir\GJ13991-PA 725 GJ13991-PA 99..271 119..289 423 43.8 Plus
Dvir\GJ16518-PA 353 GJ16518-PA 15..205 112..289 412 41.5 Plus
Dvir\GJ10859-PA 388 GJ10859-PA 23..194 119..290 394 47.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:03:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16445-PA 373 GK16445-PA 16..373 16..352 1484 87 Plus
Dwil\GK16696-PA 508 GK16696-PA 106..292 119..305 777 77 Plus
Dwil\GK14865-PA 725 GK14865-PA 118..290 119..289 418 43.8 Plus
Dwil\GK25647-PA 353 GK25647-PA 15..205 112..289 412 41.5 Plus
Dwil\GK16120-PA 509 GK16120-PA 160..357 110..293 394 38.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:03:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17544-PA 335 GE17544-PA 1..335 33..352 1323 88.3 Plus
Dyak\GE16683-PA 563 GE16683-PA 109..292 121..304 781 78.8 Plus
Dyak\GE18193-PA 446 GE18193-PA 109..281 119..289 416 43.8 Plus
Dyak\fne-PA 353 GE17033-PA 15..205 112..289 412 41.5 Plus
Dyak\GE16581-PA 478 GE16581-PA 131..326 112..293 390 39.3 Plus

LD15933.hyp Sequence

Translation from 408 to 1466

> LD15933.hyp
MYGNNNPGSNNNNGGYPPYGYNNKSSGGRGFGMSHSLPSGMSRYAFSPQD
TEFSFPSSSSRRGYNDFPGCGGSGGNGGSANNLGGGNMCHLPPMASNNSL
NNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGP
INTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY
ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGR
PRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAAHF
MSQMGVVPANVPPPPPQPPAHMAAAFNMMHRGENFADLLDGLYRRKYHYP
YL*

LD15933.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:52:09
Subject Length Description Subject Range Query Range Score Percent Strand
Sxl-PP 352 CG43770-PP 1..352 1..352 1886 100 Plus
Sxl-PY 708 CG43770-PY 1..352 1..352 1886 100 Plus
Sxl-PW 344 CG43770-PW 1..344 1..352 1825 97.7 Plus
Sxl-PH 366 CG43770-PH 1..366 1..352 1786 91.7 Plus
Sxl-PT 354 CG43770-PT 1..334 1..334 1774 99.4 Plus