BDGP Sequence Production Resources |
Search the DGRC for LD15939
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 159 |
Well: | 39 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG6985-RA |
Protein status: | LD15939.pep: gold |
Preliminary Size: | 1862 |
Sequenced Size: | 1695 |
Gene | Date | Evidence |
---|---|---|
CG6985 | 2001-01-01 | Release 2 assignment |
CG6985 | 2001-11-29 | Blastp of sequenced clone |
CG6985 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6985 | 2008-04-29 | Release 5.5 accounting |
CG6985 | 2008-08-15 | Release 5.9 accounting |
CG6985 | 2008-12-18 | 5.12 accounting |
1695 bp (1695 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069445
> LD15939.complete TTTTAAATTAACTTATGTATTTACGGTGAACTATACCCGGTAATCCTCTT CTTTAGCACCATAAAGCGGCGTTCCAAAGCTCCTTCCATGCGCCGCGCTG CAAAGCGAGAGAGCGAAGCGGCGCCTCCCAAAGAGGAACCACAGTCACCC TGCTCCTGGCCCAAAAACAATCTACCCAGCGAATGGGGCACCTCAGGGGG CACCCAAAGCCTGGGACCTCGAGAATTCAGGGCGGGCGAGAATCCCCTCA AAGATAGCCGCATCTTCCATGTGCTCTGGCGTAATCAGACCACCAAAAAG CACAAAACGTGGACTGGCAACGGAACGCTGGTGGTCACGGGATCCATAGT AACATTGAAGGATGACACCGGCAAGGTTGTGGACACCATGACATACTTTA AGCAGCGGCAACTTCAGGAGAACGATCAGCTGGAAGTAGGCAGCAAGGAT GTCGAGATTCAGGAGGAGATTAAAACCGTCGAGGAGTGCCTTATTCAGCG CCAGTTGGAAATAGCCAACTGGTGCCAAAAAATAGATGCCCAGAATGGTT GTACAGACACATCGCCACCACCTGCTGACAGTGCACCCGTTAGGTCTCAT CTGCTCAAGAAGATCAAGCGCGAGGCAGATGCCTTTGCTCCACCGCATTT GGAAATTAGCCAACATAGAGAAGATAAACATGTCTCCTATGCAGCCGCCG ATTCCAGCACTTCGATGGGAAAGAAAATCTATGAACAAAACACTTTGAAG ATAGAAAACCCTACCAAGGAGTTCACCCAATCGGAATATCTGTGTCTATT AACTCCAGCTGAACTGCAGAAAAAAATATTACTCTTTGTTTCTGAATATG CACAAACATCTAAAACAGAATCGTCTACGTTGAAGGAAATCTTCCAAATT GTATGTGATCATCCTGTGCTCCTAAAAACTTTGGGTACGAATCCAGTGTT TAAGGAAATAATGGAGGTACTGGACGCCATACTGCCGCCTTGGCCAAGCA TGGGACTTTACGACTCCGCCAAGTTCGAGTTTCTACACGTAATGCTGGAT CACTTAGTGGCGGAGCGAGGCGAGAAGTGCTGCATCTTGGCAAACAGTGA GGATTGCCTCACCCTGGTCAGGGGATACTGTCAGAGTTATAGTTTGGACC ATGCGCAGCTAGATGGTCCCCAAAAAGTGAACTTATTTAATTCTCTTGCC GATGGAGAACCAATGATTGGCTTGATTTTGACCAGTGACTTGTCGGCGCT TCGAGCTCTTCGCTGCAAACACCTAATTATTTATAATCACAATTCCAGGC AGCAAGCCAACCAACTGCTGGCCGTTGGAGCAATGGATACCAAAATATAT ACTCTCATCACAGCCGGAGGTTCTCCGGAGGAGTTGCAGTTCTATGGGCA TATGGGTGATGATTCTATAGAAGATCTTCAGAATTGCCGCAGCCAGCTTA TACCGACCGCATCTAATAATCTAGCGGACTGGACCAAAAGTGAGCCACCT TTTGACCGTGTTTTCTTTGAGGAAACTGCTATATCGGATAGTCTGGATTG TATTCAACTGGTTTATTCAAGAAAAGTGAGAGTAAAAACTTAAACAAACA AAACGTTAACTTCAAGAATATAAATGTAAACAAAATTATTTTGTTGAACT AAATGCTTAGCAGTTGAGTTAACCTGGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 18564718..18565567 | 13..868 | 4050 | 98.5 | Plus |
chr3R | 27901430 | chr3R | 18565625..18566224 | 868..1467 | 2925 | 99.2 | Plus |
chr3R | 27901430 | chr3R | 18566394..18566551 | 1520..1677 | 790 | 100 | Plus |
chr3R | 27901430 | chr3R | 18566284..18566338 | 1468..1522 | 275 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 22741230..22742097 | 1..868 | 4340 | 100 | Plus |
3R | 32079331 | 3R | 22742155..22742754 | 868..1467 | 3000 | 100 | Plus |
3R | 32079331 | 3R | 22742924..22743083 | 1520..1679 | 800 | 100 | Plus |
3R | 32079331 | 3R | 22742814..22742868 | 1468..1522 | 275 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 22482061..22482928 | 1..868 | 4340 | 100 | Plus |
3R | 31820162 | 3R | 22482986..22483585 | 868..1467 | 3000 | 100 | Plus |
3R | 31820162 | 3R | 22483755..22483914 | 1520..1679 | 800 | 100 | Plus |
3R | 31820162 | 3R | 22483645..22483699 | 1468..1522 | 275 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18564709..18565566 | 1..867 | 98 | -> | Plus |
chr3R | 18565625..18566224 | 868..1467 | 99 | -> | Plus |
chr3R | 18566284..18566337 | 1468..1521 | 100 | -> | Plus |
chr3R | 18566396..18566551 | 1522..1677 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6985-RA | 1..1506 | 88..1593 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6985-RA | 1..1506 | 88..1593 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6985-RA | 1..1506 | 88..1593 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6985-RA | 1..1506 | 88..1593 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6985-RA | 1..1506 | 88..1593 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6985-RA | 1..1677 | 1..1677 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6985-RA | 1..1677 | 1..1677 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6985-RA | 81..1757 | 1..1677 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6985-RA | 1..1677 | 1..1677 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6985-RA | 81..1757 | 1..1677 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22742814..22742867 | 1468..1521 | 100 | -> | Plus |
3R | 22742926..22743081 | 1522..1677 | 100 | Plus | |
3R | 22741230..22742096 | 1..867 | 100 | -> | Plus |
3R | 22742155..22742754 | 868..1467 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22742814..22742867 | 1468..1521 | 100 | -> | Plus |
3R | 22742926..22743081 | 1522..1677 | 100 | Plus | |
3R | 22741230..22742096 | 1..867 | 100 | -> | Plus |
3R | 22742155..22742754 | 868..1467 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22742814..22742867 | 1468..1521 | 100 | -> | Plus |
3R | 22742926..22743081 | 1522..1677 | 100 | Plus | |
3R | 22741230..22742096 | 1..867 | 100 | -> | Plus |
3R | 22742155..22742754 | 868..1467 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18566952..18567818 | 1..867 | 100 | -> | Plus |
arm_3R | 18567877..18568476 | 868..1467 | 100 | -> | Plus |
arm_3R | 18568536..18568589 | 1468..1521 | 100 | -> | Plus |
arm_3R | 18568648..18568803 | 1522..1677 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22482061..22482927 | 1..867 | 100 | -> | Plus |
3R | 22482986..22483585 | 868..1467 | 100 | -> | Plus |
3R | 22483645..22483698 | 1468..1521 | 100 | -> | Plus |
3R | 22483757..22483912 | 1522..1677 | 100 | Plus |
Translation from 87 to 1592
> LD15939.hyp MRRAAKRESEAAPPKEEPQSPCSWPKNNLPSEWGTSGGTQSLGPREFRAG ENPLKDSRIFHVLWRNQTTKKHKTWTGNGTLVVTGSIVTLKDDTGKVVDT MTYFKQRQLQENDQLEVGSKDVEIQEEIKTVEECLIQRQLEIANWCQKID AQNGCTDTSPPPADSAPVRSHLLKKIKREADAFAPPHLEISQHREDKHVS YAAADSSTSMGKKIYEQNTLKIENPTKEFTQSEYLCLLTPAELQKKILLF VSEYAQTSKTESSTLKEIFQIVCDHPVLLKTLGTNPVFKEIMEVLDAILP PWPSMGLYDSAKFEFLHVMLDHLVAERGEKCCILANSEDCLTLVRGYCQS YSLDHAQLDGPQKVNLFNSLADGEPMIGLILTSDLSALRALRCKHLIIYN HNSRQQANQLLAVGAMDTKIYTLITAGGSPEELQFYGHMGDDSIEDLQNC RSQLIPTASNNLADWTKSEPPFDRVFFEETAISDSLDCIQLVYSRKVRVK T*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6985-PA | 501 | CG6985-PA | 1..501 | 1..501 | 2629 | 100 | Plus |
Translation from 87 to 1592
> LD15939.pep MRRAAKRESEAAPPKEEPQSPCSWPKNNLPSEWGTSGGTQSLGPREFRAG ENPLKDSRIFHVLWRNQTTKKHKTWTGNGTLVVTGSIVTLKDDTGKVVDT MTYFKQRQLQENDQLEVGSKDVEIQEEIKTVEECLIQRQLEIANWCQKID AQNGCTDTSPPPADSAPVRSHLLKKIKREADAFAPPHLEISQHREDKHVS YAAADSSTSMGKKIYEQNTLKIENPTKEFTQSEYLCLLTPAELQKKILLF VSEYAQTSKTESSTLKEIFQIVCDHPVLLKTLGTNPVFKEIMEVLDAILP PWPSMGLYDSAKFEFLHVMLDHLVAERGEKCCILANSEDCLTLVRGYCQS YSLDHAQLDGPQKVNLFNSLADGEPMIGLILTSDLSALRALRCKHLIIYN HNSRQQANQLLAVGAMDTKIYTLITAGGSPEELQFYGHMGDDSIEDLQNC RSQLIPTASNNLADWTKSEPPFDRVFFEETAISDSLDCIQLVYSRKVRVK T*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16709-PA | 455 | GF16709-PA | 27..426 | 14..447 | 1175 | 51.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11163-PA | 483 | GG11163-PA | 1..483 | 1..501 | 1964 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18922-PA | 460 | GH18922-PA | 17..459 | 30..496 | 848 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6985-PA | 501 | CG6985-PA | 1..501 | 1..501 | 2629 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23229-PA | 437 | GI23229-PA | 18..431 | 29..487 | 789 | 37.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23764-PA | 468 | GL23764-PA | 34..468 | 32..483 | 1158 | 51.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20006-PA | 490 | GA20006-PA | 9..485 | 1..496 | 1161 | 47.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26465-PA | 503 | GM26465-PA | 1..503 | 1..501 | 2393 | 88.9 | Plus |
Dsec\GM11759-PA | 185 | GM11759-PA | 1..160 | 292..478 | 712 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20981-PA | 505 | GD20981-PA | 1..505 | 1..501 | 2435 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22890-PA | 473 | GJ22890-PA | 19..463 | 29..495 | 820 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11471-PA | 434 | GK11471-PA | 9..434 | 1..501 | 778 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10330-PA | 501 | GE10330-PA | 1..501 | 1..501 | 2112 | 78.8 | Plus |