BDGP Sequence Production Resources |
Search the DGRC for LD16038
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 160 |
Well: | 38 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG3709-RA |
Protein status: | LD16038.pep: gold |
Preliminary Size: | 1937 |
Sequenced Size: | 1791 |
Gene | Date | Evidence |
---|---|---|
CG3709 | 2001-01-01 | Release 2 assignment |
CG3709 | 2001-11-29 | Blastp of sequenced clone |
CG3709 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3709 | 2008-04-29 | Release 5.5 accounting |
CG3709 | 2008-08-15 | Release 5.9 accounting |
CG3709 | 2008-12-18 | 5.12 accounting |
1791 bp (1791 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069446
> LD16038.complete CGACAGCTGATAGTGTTGGTTAGCGCGCGAACCGCTTCCACGTTTTGTTT ATAATTTTAATTACACGAGAAGCTATGAAAAACCAGGATTTGGTGGAATA TTTAAGGTCGTGCGGGGTGTGCGAAATTTGCCAGCTGCGTTACCTGAAGG CCAGAGGCGCGGAGTATAGAAACATCAATGAGACTTTGCAAAAGTTGGAT GTAAAACTAAATGAAAATGTGGAAAACGAAGAGCTTGTTATATCCGAAGG GAGTCAACCATCTAAAAGGGCCCGTCTGGGCGTGTGTTCAACGTGCCTGG GTTTATTCTCCAAAGACTTTCAGAATGAGCTGCTCAGCAGCATTTTGGCA TCGGATTTCGCGAAATACGATTGCCAGAAAATCGTTCTGGCGATTTGTCT ACCGATGTCGCTTCAGTTGAGACAGCTGGCCATGTGGTTTGCCTTGCGAA GAAGATTTGGACCATCTATAGACGAAAACAATCCCCCAGACGTGCCTATA AAAGAGGCTGTCAAGCTGATCCTACACCCTATAATCTGTGAAAAGCTGGC CAAGGTTTACGATGCCAACGGTCTGATGATCAATATAGACCTCACGCACA GTCTGGAAGGCGAAGAGGTGGAAAAACTGGTCAAATTAAACAAAGAAGCC TTTCCCGCCAAGGCCTCGCATCAAAAGCGCATTGAAATTTCGCGAGGTTT ACTAGAGAAACAGTATCAACCCTCCAAAGTTAAGGCGGAAACCTATGAGA AATATTTTCAGATACCCTGCTCTAACGTAGAGGAATCTATAAAACTTACT TCCATAGACCTGCAGGGACCATTGATTTGTGTAGCTGGCAGATATCGAAA GCTGAGCAGGGAACTTTCACATACTCCCTGGATTTTGAATGGCCAAAGGC TCATGGAGGACAGTATCGAGGAAATTATAATTAGGCATGTCGGTCCCCAC TTTACAGAGAAGCTGGGCAAAATCACCTTCATGTCGAGTGGCAGAGAAGA TGTGGACGTCCGATGCCTGGGGAAAGGAAGGCCTTTTGTTCTAGAAATTC CAAATGCCAAAAGGAGTTGCCTAACTAAAGATGAAGCCTTTGCGATGGAA CGGGCTGTGGATGCGTCTGGTATGGTGTCTATACATCACCTCCAAGTCGT GCCCAGAGAAGAATTAACCCACATAAAGACGGGAGAAGAGCAGAAAAAGA AATTCTATCGCGCTCTTTGTGCCCTGCAAGAACCAGTATCAGTAAAGATT CTGGAACAACTGCAAATATCAGCAAGCTTTAACATACAACAAAAGACCCC CATACGAGTTCTTCATCGTCGTCCATTGCACACGCGTCCCAGAACAATTT ACAGTGTCACCGCCAAGGTGCATCGTGGAAATCCAAAAGCCTTGATCATC GATATTGTCACTCAAGCGGGGACTTACATAAAAGAGTTAGTTCATGGCGA ATTTGGTAGGACCACGCCATCATTGTCCTCTATTATAGGCAAACCCATGG ATATTCAAGCTCTAGATGTGGTGGGAATCGATTTAGATTGGCCACATGAA GTAGATAACTCGAAACACAAGGAATAGCGATATTATTGTTAGGTACAAAT CCATTTAAATGTTAAATGCTTAACACTTAAATTGCAAAAATGCAGAGAAT AAACAACAACATATGTGGATGAATTTTGATTACTAAGTTCATTATATGTT TAGTTCAAAATCATCAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 155165..155358 | 1..194 | 100 | Minus | |
chr2L | 153576..155096 | 195..1715 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3709-RA | 1..1503 | 75..1577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3709-RA | 1..1503 | 75..1577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3709-RA | 1..1503 | 75..1577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3709-RA | 1..1503 | 75..1577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3709-RA | 1..1503 | 75..1577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3709-RA | 1..1715 | 1..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3709-RA | 1..1715 | 1..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3709-RA | 1..1699 | 17..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3709-RA | 1..1715 | 1..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3709-RA | 1..1699 | 17..1715 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 153539..155059 | 195..1715 | 100 | <- | Minus |
2L | 155128..155321 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 153539..155059 | 195..1715 | 100 | <- | Minus |
2L | 155128..155321 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 153539..155059 | 195..1715 | 100 | <- | Minus |
2L | 155128..155321 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 153539..155059 | 195..1715 | 100 | <- | Minus |
arm_2L | 155128..155321 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 153539..155059 | 195..1715 | 100 | <- | Minus |
2L | 155128..155321 | 1..194 | 100 | Minus |
Translation from 74 to 1576
> LD16038.hyp MKNQDLVEYLRSCGVCEICQLRYLKARGAEYRNINETLQKLDVKLNENVE NEELVISEGSQPSKRARLGVCSTCLGLFSKDFQNELLSSILASDFAKYDC QKIVLAICLPMSLQLRQLAMWFALRRRFGPSIDENNPPDVPIKEAVKLIL HPIICEKLAKVYDANGLMINIDLTHSLEGEEVEKLVKLNKEAFPAKASHQ KRIEISRGLLEKQYQPSKVKAETYEKYFQIPCSNVEESIKLTSIDLQGPL ICVAGRYRKLSRELSHTPWILNGQRLMEDSIEEIIIRHVGPHFTEKLGKI TFMSSGREDVDVRCLGKGRPFVLEIPNAKRSCLTKDEAFAMERAVDASGM VSIHHLQVVPREELTHIKTGEEQKKKFYRALCALQEPVSVKILEQLQISA SFNIQQKTPIRVLHRRPLHTRPRTIYSVTAKVHRGNPKALIIDIVTQAGT YIKELVHGEFGRTTPSLSSIIGKPMDIQALDVVGIDLDWPHEVDNSKHKE *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3709-PA | 500 | CG3709-PA | 1..500 | 1..500 | 2575 | 100 | Plus |
Translation from 74 to 1576
> LD16038.pep MKNQDLVEYLRSCGVCEICQLRYLKARGAEYRNINETLQKLDVKLNENVE NEELVISEGSQPSKRARLGVCSTCLGLFSKDFQNELLSSILASDFAKYDC QKIVLAICLPMSLQLRQLAMWFALRRRFGPSIDENNPPDVPIKEAVKLIL HPIICEKLAKVYDANGLMINIDLTHSLEGEEVEKLVKLNKEAFPAKASHQ KRIEISRGLLEKQYQPSKVKAETYEKYFQIPCSNVEESIKLTSIDLQGPL ICVAGRYRKLSRELSHTPWILNGQRLMEDSIEEIIIRHVGPHFTEKLGKI TFMSSGREDVDVRCLGKGRPFVLEIPNAKRSCLTKDEAFAMERAVDASGM VSIHHLQVVPREELTHIKTGEEQKKKFYRALCALQEPVSVKILEQLQISA SFNIQQKTPIRVLHRRPLHTRPRTIYSVTAKVHRGNPKALIIDIVTQAGT YIKELVHGEFGRTTPSLSSIIGKPMDIQALDVVGIDLDWPHEVDNSKHKE *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24546-PA | 493 | GF24546-PA | 1..493 | 1..493 | 2049 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24674-PA | 501 | GG24674-PA | 1..500 | 1..500 | 2485 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10231-PA | 498 | GH10231-PA | 1..494 | 1..497 | 1874 | 69.2 | Plus |
Dgri\GH25230-PA | 52 | GH25230-PA | 1..45 | 1..45 | 159 | 60 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3709-PA | 500 | CG3709-PA | 1..500 | 1..500 | 2575 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15158-PA | 497 | GI15158-PA | 1..493 | 1..497 | 1809 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19289-PA | 498 | GL19289-PA | 1..495 | 1..496 | 1980 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17631-PA | 498 | GA17631-PA | 1..495 | 1..496 | 1979 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16693-PA | 500 | GM16693-PA | 1..500 | 1..500 | 2583 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22981-PA | 500 | GD22981-PA | 1..500 | 1..500 | 2581 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17254-PA | 497 | GJ17254-PA | 1..495 | 1..497 | 1916 | 70.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23763-PA | 497 | GK23763-PA | 1..495 | 1..497 | 1817 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16383-PA | 500 | GE16383-PA | 1..500 | 1..500 | 2438 | 93.2 | Plus |