Clone LD16058 Report

Search the DGRC for LD16058

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:160
Well:58
Vector:pBS SK-
Associated Gene/Transcriptrib-RA
Protein status:LD16058.pep: gold
Preliminary Size:3598
Sequenced Size:3958

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7230 2001-01-01 Release 2 assignment
CG7230 2003-01-01 Sim4 clustering to Release 3
CG7230 2003-08-11 Blastp of sequenced clone
rib 2008-04-29 Release 5.5 accounting
rib 2008-08-15 Release 5.9 accounting
rib 2008-12-18 5.12 accounting

Clone Sequence Records

LD16058.complete Sequence

3958 bp (3958 high quality bases) assembled on 2003-08-11

GenBank Submission: BT010295

> LD16058.complete
CTCGAATCTGCAACAACGTGCACGCAAAACTCTCAAAATTTTCTCAAAAA
CATCAAAATCACAAGGCGAGCGGAAAACTCAAGTATAAACGCTAAACGTG
TCGCAGTTTCTTGGAAAATATCTAATATTTTTGGCAACATCTCGTGTTTT
GTGCAATTGTGTGTGTGTGTGGAGCAGAAGAGCGAACAACCAGGAAAAAT
ACCAACTAAAAAAAAACTCTGTTCTGAGAATGTGAAAACATTTTTAACAT
CGAAAAACTCCGAAAGCTACAACATTTAAACAAATCAAGGGAACAACAGT
GGACAACTGAATGCGAAATACCCTTTAAAGTGTACCAGCAACTAAATTGG
CCACTTAGCACCATCGATATTGTGCCCCACCTGCGGCATTTTCATTATTT
CGTGGCAACCAGGTGATCCGTAGGCCTTAAACTGGCGCTCAAGGTCAGGA
AGCATCTATCCTTCTACTCGCCGACGCTGCTGAGCGCCGCCTTCACCAGT
CTGAACGGTGTGTACAACAACAGCAGCAATAGCAGCGATCCCGCTCCGGA
CGAGGAGCCCGACCAGCCAGCGAACCAGCACCACCACAGCCACCATTCAA
GGGTGAGCCACCACCACATTCCGCGGGAGGCCAAGCAGGACAGGGATCGC
GAAACGGAGCGTGACCAGGAGATGGGCGGCCCAACGGCGCCGGTAGCCAG
CAGTGGCGAGGTGGGACAGACGTACTGCCTCCGCTGGAACAACCACCAGA
CCAATCTGGTACAGATTCTACACGCCCTGCACGAGGTGGGCAGCTATGTG
GACTGCAGCCTGGTGGTGGACGATGAACAGTTCCAGGCCCATCGCGTGGT
TCTGGCGGCCAATTCACCGTATTTCCAGCACATCCTGAAGGATGTGCCGC
AGGACCACTGCAGCATCATACTGCCGGGAGTGAAGGGCTTCGAGATTGCC
GCTTTGCTGCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCA
GGAGCCGGAGATTCTGCGCACAGCCAAGGAGCTTCAGGTCAAGGGTCTGT
ACGACAACTTGATGAAGTTCAATCATGCCAGCGTCACGCCCACCTCCAGT
TCGGGAGCTGGCGGAGCCAAGCCCCAGAACGGATCAGCATCCAACCACTC
CTCATCCGTGATCTCCACATCCACGCACATCTCGCCCAGTGCCGCCATCT
CGAGCAGCTGCTCGCCACCACCGCCGCCGCAGTTTGGCTATCAGCCGGGC
TACAGCCATTATCCTCAGCAGCAGCCGATGTCGGCTAGTCAGATTCCGGC
CGGTGAGGCTCCACTGACCCCCACCCAGGCCACACCCCACTCGGCGGCCT
CGGGAGCGGGAGAAGCCGGTGGACAGTGGCCACTGACACCCTCCGCCGCC
GCCGCCATGTTGAACTCTGTCTACGAATCAGCCGCCGATATGAATCCTCT
CAAGCGCAAGAAGCTGTCGGCCATTTCAAGCATGCTTCTGAGTGGAAACC
GCGACACACCCATCCTGAGAAACGTTCTGGCCCAAGCTAATCCCGCTGAC
TCCTCGCAACCCGGACCAATGAATGCCAATGGAGAGAAGACGCCCACTCA
TCCCCACCAGAACACCCAGCTTCCTGCCGGATTGGGAGTAAGTGGAGGCG
AGCGCAACCACAGCTTCAATGGCTCCGACTACGGCGGCGACAAGGAACCA
CTTTCGCCCTACACAGATCGTTCCTTTGAAGAGGAGACCGGTCAGTCTGG
CGGCAAGAAGCCGGAATGGAAGCGATACAAGCAGTATACCAGAGCGGATA
TGATGTGCGCCATCCAAGCGGTGAGGGAGGGAATGAGTGCCCTGCAGGCG
AGCAGGAAGTACGGCCTGCCCAGTCGCACTCTCTACGACAAAGTCCGTAA
GCTGAACATCACCACAGGACGTGGCACACACCGCACACCCAAGCGCAGCC
CGCCGGGAGCTGAGTCCTCACAAGGTTTCTCCTATTCCGCTGCGGCAGCC
GCTGCTGCACACAACTACGGTCATGGACATGGCCATCACTCGGAGGTGAA
GCGTGATCAGAAGGTGGACCATGTGCCCGCCCATCACGGCATGCCGCCCA
CCATTCCACCCTCAGCTGCGGCCCTTCTGGATCACGCTTTCCTTCAGCAG
GCTCTGGAGAACCGTGGTGGTGACATGGCCGGCCGAGAGGCTCTCCATGC
CATGGCTCTGGCCGCAGCGGCCCATGCCGCTGCCAATCGCCTTTCCAGCA
GTCCAGCGGAGATGGACCAGCGCTCCAATGGCCATGGCATGCGGTCGCCA
AGTCCGCAAGGTCGTCACTACCCGCACGAGCAGGAGGCCATGGACTTGGA
GATGGAGAAGCACGAGCAAAATATTATCAAGAGGGAACGCGACCAGGACG
AACGTGAAGATGCGGACGATGAGGAGGATCATGAGCAAGAGCACGTGGAG
GATCTCTCGCTGGCTAGAAAGGAGCGGCCACCATCGCCCTACTCGCCCCA
GCCAACCGAGGCTGGTGCCGGCGTGATTATGCACGCCAGCAGTGCGTCCG
CCAATGGCAAGGATCACGTGGACTACCCATCCTCGCCGCAGTTCGTTCCC
ATTGGTCTGAAGAGGGAGCTGATGGAAGGCGAGGACGCTCAGGCCCGGGC
CGACTGATTAACGCTCACCATGGCCTGGCAGTATGCCACGGACAGCCTAG
ACTCCTTGGAGTAGGCCAGGCTTAGATAGCAACTCCTATTATTCAAACCC
AATTAGATCCATCCTTGTGTTACTTTCCTTACTTACCATCGGCGACTCAG
GCGCCGACCAGCGTTGGTGAAGCTTTAAACGAAGAAACCTCATCCCAGTC
GTTGTGGGAATCATCCGCACCAGCACCTGGCACCCATCGAAAATCAAACC
CACACACTAAACTAAATTGTTGTCAGCATCACTTTGTGCCTAAAAAAAAC
AGAAATGTTAGGATATAGATAGTAGGATAGGACAGCATAGAATACAGATA
GGTACCCTTAGGCTAGGCACTCGTAGGCCATCTTTGGAAACCAGCTAGTT
GTAGGCCTTAAAACAGTGTTACTCCACCATCCCAGATGCCGGCCAACTGA
CAAAACTAAGATATGTGTGCATATGTAAACCCACTTACATAAGACTGAAG
GCGGAATCGGGAGGCGGTGGAGGAGCTATCTAAGGACAGAGCAGTAGAGG
CTCCCATCAGAATGGGTTAGCGGGTTAGCTACACCTTGTACAACTTTGTT
AAATGCCAGTGATTTGTTTTAAAAATTATTAGCACTAGATTATTTATAAC
GACCATGCATGTACGTGGCCTTACTTTTATGATTTTCGAATCGAAGAGAA
ACCAGAAGATCCCACTTGAACAGAACTACCTCAAATAGCGTATCTTTGTT
AGCCTCATGTTATCCTGTTAGCGAGATATTTAAATCGTCCTGGGTTGAAT
TTATAAGACTGACACCGACTCAAACGTACCACGAGCAAGAGCACACGCAT
TAAAATAAAATAAAATAAAATTATAAACTAAACTTAAATACGAATCGAGA
TCCTTAGTTGAAAATCTGTAAGTTTCCCGCAAATTGATTAGTTCTAAGGC
CATCAACTAAACGTAAGCACTAAAACTAAACTATTTATAAGACAAAACAA
AACAAAACAAAAAACAACACACATGAAAACATGCGCTGGGGGCAATGCAA
TAGGCTCTTTAATTATAAACACCTACACTTATGCAACTTATATAGTCGTA
CGGTCGATAATGTTAAATTGTTATACGAGTAACTCTGTACATAGCATCAT
AGTCCACACATACACATGCGAATTATAAATCTAGTTTTAAGTATTCCGAA
TTGTACTGCAATTTAAATTATCCCTAGACACCCGACTTTCATCATGTAAA
GATCAGCGAAGGAACGCGAAATAAACTGACTGAAGAATCAAAAAAAAAAA
AAAAAAAA

LD16058.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
rib-RA 4096 rib-RA 115..4056 1..3942 19710 100 Plus
rib.a 3726 rib.a 148..3686 404..3942 17695 100 Plus
rib.b 4246 rib.b 709..4246 404..3941 17690 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:23:55
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 15165030..15168571 404..3939 17230 99.3 Plus
chr2R 21145070 chr2R 15162927..15163331 1..405 2010 99.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:03:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:23:53
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19277861..19281399 404..3942 17695 100 Plus
2R 25286936 2R 19275749..19276153 1..405 2025 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:00:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 19279060..19282598 404..3942 17695 100 Plus
2R 25260384 2R 19276948..19277352 1..405 2025 100 Plus
Blast to na_te.dros performed 2019-03-15 18:23:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2339..2462 514..629 122 62.4 Plus

LD16058.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:24:33 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 15162927..15163330 1..404 99 -> Plus
chr2R 15165031..15168571 405..3939 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:50:55 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
rib-RA 1..1986 672..2657 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:53:27 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
rib-RA 1..1986 672..2657 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:01:57 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
rib-RC 1..2043 672..2714 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:18:50 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
rib-RA 1..1986 672..2657 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:01:17 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
rib-RC 1..2043 672..2714 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:16:54 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
rib-RA 24..3962 1..3939 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:53:26 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
rib-RA 24..3962 1..3939 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:01:57 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
rib-RA 18..3956 1..3939 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:18:50 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
rib-RA 24..3962 1..3939 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:01:17 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
rib-RA 18..3956 1..3939 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:24:33 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19275749..19276152 1..404 100 -> Plus
2R 19277862..19281396 405..3939 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:24:33 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19275749..19276152 1..404 100 -> Plus
2R 19277862..19281396 405..3939 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:24:33 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19275749..19276152 1..404 100 -> Plus
2R 19277862..19281396 405..3939 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:01:57 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15163254..15163657 1..404 100 -> Plus
arm_2R 15165367..15168901 405..3939 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:53:07 Download gff for LD16058.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19276948..19277351 1..404 100 -> Plus
2R 19279061..19282595 405..3939 100   Plus

LD16058.pep Sequence

Translation from 671 to 2656

> LD16058.pep
MGGPTAPVASSGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVD
DEQFQAHRVVLAANSPYFQHILKDVPQDHCSIILPGVKGFEIAALLQYMY
TGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHASVTPTSSSGAGGAK
PQNGSASNHSSSVISTSTHISPSAAISSSCSPPPPPQFGYQPGYSHYPQQ
QPMSASQIPAGEAPLTPTQATPHSAASGAGEAGGQWPLTPSAAAAMLNSV
YESAADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPM
NANGEKTPTHPHQNTQLPAGLGVSGGERNHSFNGSDYGGDKEPLSPYTDR
SFEEETGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLP
SRTLYDKVRKLNITTGRGTHRTPKRSPPGAESSQGFSYSAAAAAAAHNYG
HGHGHHSEVKRDQKVDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGG
DMAGREALHAMALAAAAHAAANRLSSSPAEMDQRSNGHGMRSPSPQGRHY
PHEQEAMDLEMEKHEQNIIKRERDQDEREDADDEEDHEQEHVEDLSLARK
ERPPSPYSPQPTEAGAGVIMHASSASANGKDHVDYPSSPQFVPIGLKREL
MEGEDAQARAD*

LD16058.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:27:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11582-PA 785 GF11582-PA 113..785 1..661 2268 80.6 Plus
Dana\GF11096-PA 562 GF11096-PA 5..118 16..129 280 43 Plus
Dana\GF10081-PA 995 GF10081-PA 104..216 16..128 276 41.6 Plus
Dana\GF24270-PA 746 GF24270-PA 4..114 16..126 271 41.4 Plus
Dana\GF10078-PA 1088 GF10078-PA 185..306 5..126 270 38.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:27:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21956-PA 663 GG21956-PA 1..663 1..661 3475 98.6 Plus
Dere\GG22728-PA 610 GG22728-PA 5..118 16..129 284 43 Plus
Dere\GG14626-PA 528 GG14626-PA 100..212 16..128 276 41.6 Plus
Dere\GG14906-PA 743 GG14906-PA 4..114 16..126 271 41.4 Plus
Dere\fru-PA 991 GG16422-PA 100..217 12..129 262 42.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:27:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23095-PA 888 GH23095-PA 392..872 190..656 1040 61.6 Plus
Dgri\GH23095-PA 888 GH23095-PA 143..271 16..144 649 87.6 Plus
Dgri\GH20621-PA 1032 GH20621-PA 5..118 16..129 277 43 Plus
Dgri\GH15669-PA 517 GH15669-PA 118..228 18..128 270 41.4 Plus
Dgri\GH15390-PA 812 GH15390-PA 4..114 16..126 270 41.4 Plus
Dgri\GH15666-PA 655 GH15666-PA 207..334 15..149 266 37 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:14
Subject Length Description Subject Range Query Range Score Percent Strand
rib-PC 680 CG7230-PC 1..661 1..661 3484 100 Plus
rib-PB 661 CG7230-PB 1..661 1..661 3484 100 Plus
rib-PA 661 CG7230-PA 1..661 1..661 3484 100 Plus
ab-PE 899 CG43860-PE 76..367 16..303 289 29.3 Plus
ab-PA 904 CG43860-PA 76..367 16..303 289 29.3 Plus
ab-PF 894 CG43860-PF 76..380 16..313 287 29.7 Plus
ab-PD 894 CG43860-PD 76..380 16..313 287 29.7 Plus
ab-PB 894 CG43860-PB 76..380 16..313 287 29.7 Plus
BtbVII-PE 743 CG43365-PE 4..317 16..335 279 30.2 Plus
BtbVII-PD 743 CG43365-PD 4..317 16..335 279 30.2 Plus
BtbVII-PB 743 CG11494-PB 4..317 16..335 279 30.2 Plus
BtbVII-PA 743 CG11494-PA 4..317 16..335 279 30.2 Plus
BtbVII-PI 747 CG43365-PI 4..317 16..335 279 30.2 Plus
BtbVII-PG 816 CG43365-PG 4..317 16..335 279 30.2 Plus
BtbVII-PF 907 CG43365-PF 4..317 16..335 279 30.2 Plus
BtbVII-PH 748 CG43365-PH 4..322 16..335 271 29.7 Plus
fru-PI 870 CG14307-PI 15..616 12..617 271 22 Plus
fru-PJ 906 CG14307-PJ 51..652 12..617 271 22 Plus
fru-PE 955 CG14307-PE 100..701 12..617 271 22 Plus
fru-PN 960 CG14307-PN 105..706 12..617 271 22 Plus
fru-PC 854 CG14307-PC 3..600 16..617 266 22 Plus
fru-PM 854 CG14307-PM 3..600 16..617 266 22 Plus
fru-PL 854 CG14307-PL 3..600 16..617 266 22 Plus
lola-PM 465 CG12052-PM 5..176 16..181 263 36.6 Plus
lola-PH 518 CG12052-PH 5..176 16..181 263 36.6 Plus
lola-PK 546 CG12052-PK 5..176 16..181 263 36.6 Plus
lola-PV 549 CG12052-PV 5..176 16..181 263 36.6 Plus
lola-PF 565 CG12052-PF 5..176 16..181 263 36.6 Plus
lola-PU 575 CG12052-PU 5..176 16..181 263 36.6 Plus
lola-PT 575 CG12052-PT 5..176 16..181 263 36.6 Plus
lola-PY 577 CG12052-PY 5..176 16..181 263 36.6 Plus
lola-PX 602 CG12052-PX 5..176 16..181 263 36.6 Plus
lola-PQ 603 CG12052-PQ 5..176 16..181 263 36.6 Plus
lola-PL 608 CG12052-PL 5..176 16..181 263 36.6 Plus
lola-PZ 665 CG12052-PZ 5..176 16..181 263 36.6 Plus
lola-PO 668 CG12052-PO 5..176 16..181 263 36.6 Plus
lola-PA 706 CG12052-PA 5..176 16..181 263 36.6 Plus
lola-PE 748 CG12052-PE 5..176 16..181 263 36.6 Plus
lola-PD 748 CG12052-PD 5..176 16..181 263 36.6 Plus
lola-PJ 757 CG12052-PJ 5..176 16..181 263 36.6 Plus
lola-PW 771 CG12052-PW 5..176 16..181 263 36.6 Plus
lola-PB 787 CG12052-PB 5..176 16..181 263 36.6 Plus
lola-PC 787 CG12052-PC 5..176 16..181 263 36.6 Plus
lola-PR 891 CG12052-PR 5..176 16..181 263 36.6 Plus
lola-PG 891 CG12052-PG 5..176 16..181 263 36.6 Plus
lola-PP 963 CG12052-PP 5..176 16..181 263 36.6 Plus
lola-PI 970 CG12052-PI 5..176 16..181 263 36.6 Plus
lola-PAA 970 CG12052-PAA 5..176 16..181 263 36.6 Plus
br-PQ 880 CG11491-PQ 5..586 16..611 262 22 Plus
br-PI 880 CG11491-PM 5..586 16..611 262 22 Plus
br-PH 880 CG11491-PL 5..586 16..611 262 22 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:27:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18921-PA 826 GI18921-PA 96..767 1..630 1786 66.4 Plus
Dmoj\GI20175-PA 626 GI20175-PA 5..118 16..129 281 43 Plus
Dmoj\GI12710-PA 1127 GI12710-PA 178..298 5..126 275 40.2 Plus
Dmoj\GI12711-PA 539 GI12711-PA 130..240 18..128 272 41.4 Plus
Dmoj\GI12995-PA 794 GI12995-PA 4..114 16..126 269 41.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:27:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17640-PA 798 GL17640-PA 103..798 1..661 2055 72.2 Plus
Dper\GL17189-PA 680 GL17189-PA 5..118 16..129 283 43 Plus
Dper\GL20785-PA 963 GL20785-PA 4..114 16..126 273 41.4 Plus
Dper\GL23993-PA 415 GL23993-PA 6..138 16..152 266 36.5 Plus
Dper\GL19550-PA 895 GL19550-PA 80..190 18..128 264 41.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:27:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20197-PA 697 GA20197-PA 1..697 1..661 2033 72.5 Plus
Dpse\GA30442-PB 609 GA30442-PB 5..118 16..129 285 43 Plus
Dpse\GA30442-PS 461 GA30442-PS 5..118 16..129 284 43 Plus
Dpse\GA30442-PJ 554 GA30442-PJ 5..118 16..129 283 43 Plus
Dpse\GA30442-PG 490 GA30442-PG 5..118 16..129 282 43 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:27:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13162-PA 568 GM13162-PA 256..568 349..661 1345 97.4 Plus
Dsec\GM13162-PA 568 GM13162-PA 1..256 1..256 1192 99.2 Plus
Dsec\GM20503-PA 612 GM20503-PA 5..118 16..129 282 43 Plus
Dsec\GM14240-PA 541 GM14240-PA 100..212 16..128 277 41.6 Plus
Dsec\GM14532-PA 743 GM14532-PA 4..114 16..126 272 41.4 Plus
Dsec\GM14235-PA 575 GM14235-PA 189..341 8..170 270 34.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 02:27:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11439-PA 751 GD11439-PA 91..751 1..661 3496 99.1 Plus
Dsim\lola-PA 671 GD25965-PA 63..176 16..129 280 43 Plus
Dsim\GD13495-PA 1066 GD13495-PA 189..341 8..170 272 34.4 Plus
Dsim\ab-PA 891 GD23771-PA 78..188 18..128 260 40.5 Plus
Dsim\ttk-PA 813 GD21596-PA 6..116 16..126 256 38.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:27:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19776-PA 773 GJ19776-PA 84..773 1..661 1831 67.3 Plus
Dvir\GJ20132-PA 998 GJ20132-PA 5..118 16..129 278 43 Plus
Dvir\GJ12698-PA 524 GJ12698-PA 105..220 13..128 277 40.5 Plus
Dvir\GJ13138-PA 798 GJ13138-PA 4..114 16..126 270 41.4 Plus
Dvir\GJ13245-PA 872 GJ13245-PA 52..175 5..128 270 40.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 02:27:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20672-PA 735 GK20672-PA 11..735 7..661 1820 67.3 Plus
Dwil\GK10673-PA 1051 GK10673-PA 5..118 16..129 281 43 Plus
Dwil\GK16863-PA 1092 GK16863-PA 111..223 16..128 277 41.6 Plus
Dwil\GK17760-PA 1395 GK17760-PA 4..114 16..126 271 41.4 Plus
Dwil\GK14898-PA 905 GK14898-PA 89..201 16..128 265 41.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 02:27:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12030-PA 752 GE12030-PA 90..752 1..661 3492 98.9 Plus
Dyak\GE13086-PA 610 GE13086-PA 5..118 16..129 284 43 Plus
Dyak\bab1-PA 542 GE20985-PA 100..212 16..128 276 41.6 Plus
Dyak\GE20360-PA 741 GE20360-PA 4..114 16..126 272 41.4 Plus
Dyak\GE20983-PA 1072 GE20983-PA 203..348 16..170 263 32.9 Plus

LD16058.hyp Sequence

Translation from 671 to 2656

> LD16058.hyp
MGGPTAPVASSGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVD
DEQFQAHRVVLAANSPYFQHILKDVPQDHCSIILPGVKGFEIAALLQYMY
TGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHASVTPTSSSGAGGAK
PQNGSASNHSSSVISTSTHISPSAAISSSCSPPPPPQFGYQPGYSHYPQQ
QPMSASQIPAGEAPLTPTQATPHSAASGAGEAGGQWPLTPSAAAAMLNSV
YESAADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPM
NANGEKTPTHPHQNTQLPAGLGVSGGERNHSFNGSDYGGDKEPLSPYTDR
SFEEETGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLP
SRTLYDKVRKLNITTGRGTHRTPKRSPPGAESSQGFSYSAAAAAAAHNYG
HGHGHHSEVKRDQKVDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGG
DMAGREALHAMALAAAAHAAANRLSSSPAEMDQRSNGHGMRSPSPQGRHY
PHEQEAMDLEMEKHEQNIIKRERDQDEREDADDEEDHEQEHVEDLSLARK
ERPPSPYSPQPTEAGAGVIMHASSASANGKDHVDYPSSPQFVPIGLKREL
MEGEDAQARAD*

LD16058.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:07:20
Subject Length Description Subject Range Query Range Score Percent Strand
rib-PC 680 CG7230-PC 1..661 1..661 3484 100 Plus
rib-PB 661 CG7230-PB 1..661 1..661 3484 100 Plus
rib-PA 661 CG7230-PA 1..661 1..661 3484 100 Plus
ab-PE 899 CG43860-PE 76..367 16..303 289 29.3 Plus
ab-PA 904 CG43860-PA 76..367 16..303 289 29.3 Plus