Clone LD16082 Report

Search the DGRC for LD16082

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:160
Well:82
Vector:pBS SK-
Associated Gene/TranscriptRgl-RA
Protein status:LD16082.pep: gold
Preliminary Size:4043
Sequenced Size:4557

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8865 2001-01-01 Release 2 assignment
CG8865 2003-01-01 Sim4 clustering to Release 3
CG8865 2003-08-05 Blastp of sequenced clone
Rgl 2008-04-29 Release 5.5 accounting
Rgl 2008-08-15 Release 5.9 accounting
Rgl 2008-12-18 5.12 accounting

Clone Sequence Records

LD16082.complete Sequence

4557 bp (4557 high quality bases) assembled on 2003-08-05

GenBank Submission: BT010055

> LD16082.complete
GTTGTTGGCGGCGGTTGCGTCGCGTGTCTCTCTACCGAGAGCTTTGTGTG
TGTGTCTCGCGCGCGTTTTACGCTCTGCGCCCCCTACGCTCCCCTTTTCC
AAGTAGAGAAACCCCCGAATGTGAATTTTGTATAATGTTTTTGTAATAAC
ATGGATATCTCATGTTGAGATTTTCAGCCAAGCGAATGAAAATGCAAGCG
GTATCCCGAAAATTGCCGTTTACGTGTGTGCGAGTGCAGCATTAGCAAAA
GGAAAAGAGATAAAAGTGAAAACAAATAAATAGTAGGGAAGACGTGCTAA
AGCACGAGAGCAAAGAGGAGATTGCCAGGCAGACGCATAGACGTAGTGCA
ACGAACCCTTCTTCGCGGACCAAGGATTCACCACTTACCACTAACCGGAG
AACAAATACCAATATTAACCCCCCCACCTCTACTGCTACTGGGTGTGTTT
CTCTATGTCCCGTTGACTCATCGTTCCCAGGAAGCTGAACAACGGTATAG
CGGCCAGAACACAGAAGCCCAGTACAAAAAAAGAGCAGCAGGAATATCGA
TTTTACTTGCCTTTTACTTATACAACACCCCCACCACCCATTGAACTGCA
CTTGGGTGTAAAAATAAAACACCAGAAGCCATTAAAGGAGACGTGTAAAT
TAAAGCGAACCGACGAGAAGAGGATAACGGATAGGAAAACCCAAGCAGTG
CATCCGTGGAAATCTCAGCAACATTTCTCAAGGAACAAAAGCCAATCTCA
AATGAATTTCACAAGTCGCGCCAACTGCAAATGCCCGCATAGCCAAAAGC
ACCAGCAGAAGCCCGCTCTGATCAAGAGTCACACCTGCGCCTATCAGCTG
CAGGATCTGACAGGATATAATCGCGCCCTGATGCCTCCGCTGGATAACAC
GGACTTTAGCAATGCCTGGCGGCAGGTGAACAACAACACCACCAGCCAAT
CCTGCGCCTACCACCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGGATGCA
AAGGATTCCAAGAGGCACTATCACCATCACACCTGTCCAAGACAGCGGAA
AAAGTCCATGACCCCGGTGGAGCCAACGCATTTGTGTCAAAAGCACCAGG
AAGCCAAGCAGCGGCGATCTAGATCCGCATCTGCCAAGCCGCGCAGGAAC
AGTTCGTATCACTCCTATGACGACTTGGATGTCTCATCCGCGGTACTCAA
TGCGGAGCGAAAGGTGGTGGCCAGTTTAAAGTATCTATGCGCCTGCACGG
GAGCCACTTTGAGGAATCTCTCCAAGAAAACCAAGGATCTGCATGCCAAA
AACTATACCTACACGAAGCCCACGTGGCGCCTTTGGGGCGAAGAGCACGA
GAAGAATGCAATTTTCACCGTTTACCTGAAGAAAGTGCGATACCACCGAC
CGACGCCCACAGCCAGCAATGACTCAGATGATGAGATTTCCCATCTGGAG
TGGGAGACTGTACGCGTGCGTTTCGTTAAGGCGGCTACATTGGCTCGATT
GGTGGAGGCGTTAGCCACCGACGACGGCGAGCTGGAGTCCACCTTCATCA
ACGTGTTCCTGTCCACATATCGCACCTTCTCCACACCCAAGCAGGTGCTC
AGTCTGCTGACGCAACGGTACGATGCTCTGCATGAGAAGCACCTGGAGGA
GTTGGAGCAGGCACAGCAAAATGGACAGGTCATGGATCCCGCCTACGATC
CACACGCCTCCATTCACGAGCAGCACAAGAAAACCCTAGTCTCAGCGCTG
CACGTCTGGCTGGATGGATTCCCGGAGGATTGGCACGAGGATAACCTGCA
ACAGATCTTGGCATTTGCCACCAAGCGGCTGAAACGATCCGATCTGCACA
TCAAGGTGCTGAATCGTCTGGAACGGCTCATCAAACAGTCTCTCTATGGA
AATGGAGGAGGAAGCGGTGGCTCGGAGAACAATGGTCATTCGTGGCTTTC
CGCAGCGCGCTCACAACAGATGCAGCAATTCATGATTCCCACTCACTATG
GCTCTTCGTATGACCTCACGGATCAGTTCAATGGCATGTACCTCTCGCCA
ATGGGCCACGGGCCCATCTATCGTGGACCTACCCACTTTCTGCAGGCATT
CCGTTTTCCGCATGTGCCCGTCCGGCATTTTGCTGAGCAGTTGACCCGTA
TGGATACGGAACTCTTTAAGCGACTGATTCCCCACCAGTGCCTCGGACAC
ACGTGGGCACGACGTGATAGTGGAGGATCCGAGACTGTGGTGGCCACCAT
CAACCAGTTTAATGCAGTGCTCTTCCGGGTGGTGTCCAGTATCCTGATCG
ATCGCCTGAAACCTCAGGAGCGCGCTCTGAACATTTCACGATGGATTGAT
ATTGCCCAAGAGTTGCGCATGCTCAAAAACTTTAGTTCGCTCAAGGCCAT
CATTTCGGCTCTAAACTCCAATTCAATATACCGCCTCTCCAAGATCTGGG
AAGTGCTGCCTAAAGAAAGGATGGAAGTCTTTACGGAGCTGGCGAATATT
TGCTCGGAGGATAACAATGCTTGGACTCTGCGAGAAGTGTTGAAACGAGA
AGGAACGGCCAAAAATCCAGATCCAGGCAGTGATCACAGCGATAGGCATC
TGCAGAAGCTTATTCTGAATTTGGGAACACAAACATCGCATGGAACGATA
CCCTATTTGGGTACATTCCTTACCGACCTGACCATGATCCATACGGCCAA
TCCGGACTACCTCACCGAGAATAAGCTCATAAACTTCGACAAGAAGCGCA
AGGAGTTCGAAGTTCTGGCCCAGATCAAGTTACTTCAGGGAGCAGCTAAC
ACATATAATCTCCAGGCGGATGCGCTCTTTGATCATTGGTTCAACTCAAT
GCCAGTGTTTGATGAGCGTGAAGCCTTTGAGCTGAGTTGTCGACTGGAAC
CACCACCGCCGGCGCCACGGAAATCGGTGGTCAGCACTAACACCTCTTTA
ACAAACACGACCGCCTCATCGACGGCTTCTATTATGGGCCACCGCAAGAC
TGACTCCATACACTCGAATTCGAGCAGCGGAGCGGGATCACAGTTCTACT
GCGAACTAAACAGTAGTACCAGCTCCAGACATAACTCCTTGGATCGGGAT
GTCCACCATCAGCACGCCTCCTTGATGTCCGCCTCGAGTAGTGTGTCCAA
TCTGTCGTTGGACTCCAGTAACTCCGGCGGTCGGCAGTCCGGCAAGCTGA
CCCACTCTCAGTCTATGGGAAATGGTCTGAAATCTCACGGAAATGGCACT
ACGAATGGTGGATCGCCCCATATCAATGCTCAGTTGGTGCAACCATCAAG
TGGAACCCCTCACTCTGCTCCCGATTTCTATATCATTCGGGTGACCTATG
AAACAGACAACATCGAGCTGGATGGGATTGTGCTGTACAAGAGTATTATG
CTGGGAAATAACGAGCGCACGCCGCAGGTTATCCGAAATGCGATGCTTAA
ATTGGGTCTGGAGGATGATCCGGATAGGTTTACTTTGGCGCAGGTCCTAC
CCGATAAGGAACTGGTGATGCCGAAGAATGCGAATGTCTACTACGCGGTT
AACACGAACTACAACCTCAACTTCATCCTAAGACCGCGAAAGGAAGAGGG
TGTGGCAGGAAGCTAGTCCACAGCCGTGCCTCTGTCCCAATTGTGGTGTC
TGGGATACGAGGGCGAGGAGTGAGGGTTAAGGATTATACATTGGGGGGGA
AATTGTAAATAGCTAGAGCTTGACTCGCCCATGACAAAACTGGATAAACC
AATTTCTATTTAGGTTCGTAACTCGTTTAAGTTATTTATTTATTATTTGA
AAAGTGCAAGGATAGTAGAAGGAAAGAAATCGATTAGTGCGATTACCGAT
TATTTCGATTGATGTCTATTATTTCAAATGCTGTCAATTATCACTTAGCC
AACTTTGTAATCTCTAATTTTTCGCAGGCCTTGAGTTGTATATGATTTAA
AAGCCCAATCCAAAACATATATTATACAGAGACTCTACTGGAATATTTGC
TGATATTTACAAACACACATATACATTAAGTATATTTACTTATATACAAC
CATTGATATTCTAAATGTGGTACAATAATTTTAGATCTTGAAACGGATAT
TGAGTTTGTTTAAGGATTCTCATTGTCTGTACTTAACTTTGAGGTCTTAA
AAACACAAACAACAAAGAATATTTGTATAGATGTTTTTACCCACAGTACG
TGTATTATAAATACCAATTTAAATATAAGTACTATATGTAACATTTTTCG
AGTGGAGTGCACAACAACAAATATTGTTTTATCGATACTTTAGCCGTATA
AGATACCGTATTTCAGATTCTCTAAGTTATCTACATTGAAAATTAATGAG
AGAATGAAACAATTATACACTTACGGTATACACTAAGAATCTGCTTTGAT
TTATACATATTAAATATGATTAATATTTAACTACAAATTTAAGTTAACGA
AAGAAAAGAAGGAAAACAAAAGAATATTGTAAATATAAAAGTGAAAATCG
ATAATTTGTGTTCTTCTGAAAAATAAATTGTACCAAAAGAAAAAAAAAAA
AAAAAAA

LD16082.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:52:24
Subject Length Description Subject Range Query Range Score Percent Strand
Rgl-RA 4625 Rgl-RA 81..4621 1..4541 22705 100 Plus
Rgl-RD 3879 Rgl-RD 648..3871 1318..4541 16120 100 Plus
Rgl-RB 4029 Rgl-RB 798..4021 1318..4541 16120 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:22:33
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 13897088..13899149 4539..2470 10075 99.2 Minus
chr3L 24539361 chr3L 13909338..13910091 754..1 3755 99.9 Minus
chr3L 24539361 chr3L 13904117..13904658 1318..777 2620 98.9 Minus
chr3L 24539361 chr3L 13899434..13899951 2318..1801 2575 99.8 Minus
chr3L 24539361 chr3L 13900011..13900394 1804..1421 1920 100 Minus
chr3L 24539361 chr3L 13899210..13899365 2470..2315 780 100 Minus
chr3L 24539361 chr3L 13900641..13900745 1421..1317 525 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:03:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:22:31
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13906899..13908970 4541..2470 10360 100 Minus
3L 28110227 3L 13919191..13919944 754..1 3770 100 Minus
3L 28110227 3L 13913962..13914526 1318..754 2825 100 Minus
3L 28110227 3L 13909255..13909772 2318..1801 2590 100 Minus
3L 28110227 3L 13909832..13910215 1804..1421 1920 100 Minus
3L 28110227 3L 13909031..13909186 2470..2315 780 100 Minus
3L 28110227 3L 13910483..13910587 1421..1317 525 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:18:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 13899999..13902070 4541..2470 10360 100 Minus
3L 28103327 3L 13912291..13913044 754..1 3770 100 Minus
3L 28103327 3L 13907062..13907626 1318..754 2825 100 Minus
3L 28103327 3L 13902355..13902872 2318..1801 2590 100 Minus
3L 28103327 3L 13902932..13903315 1804..1421 1920 100 Minus
3L 28103327 3L 13902131..13902286 2470..2315 780 100 Minus
3L 28103327 3L 13903583..13903687 1421..1317 525 100 Minus
Blast to na_te.dros performed 2019-03-16 10:22:31
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 8307..8641 4160..4488 137 54.5 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 5594..5677 930..1006 134 66.7 Plus
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 667..776 4395..4504 126 63.2 Plus

LD16082.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:23:25 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 13904117..13904671 755..1318 92 <- Minus
chr3L 13897088..13899148 2471..4539 99 <- Minus
chr3L 13899210..13899362 2318..2470 100 <- Minus
chr3L 13899435..13899947 1805..2317 99 <- Minus
chr3L 13900011..13900394 1421..1804 100 <- Minus
chr3L 13900642..13900743 1319..1420 100 <- Minus
chr3L 13909338..13910091 1..754 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:47:01 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
Rgl-RA 1..2865 752..3616 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:22:28 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
Rgl-RA 1..2865 752..3616 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:48:29 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
Rgl-RE 1..2922 752..3673 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:48:47 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
Rgl-RA 1..2865 752..3616 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:06:27 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
Rgl-RE 1..2922 752..3673 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:47:01 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
Rgl-RA 1..4539 1..4539 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:22:27 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
Rgl-RA 1..4539 1..4539 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:48:29 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
Rgl-RA 22..4560 1..4539 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:48:47 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
Rgl-RA 1..4539 1..4539 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:06:27 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
Rgl-RA 22..4560 1..4539 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:23:25 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13906901..13908969 2471..4539 100 <- Minus
3L 13909031..13909183 2318..2470 100 <- Minus
3L 13909256..13909768 1805..2317 100 <- Minus
3L 13909832..13910215 1421..1804 100 <- Minus
3L 13910484..13910585 1319..1420 100 <- Minus
3L 13913962..13914525 755..1318 100 <- Minus
3L 13919191..13919944 1..754 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:23:25 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13906901..13908969 2471..4539 100 <- Minus
3L 13909031..13909183 2318..2470 100 <- Minus
3L 13909256..13909768 1805..2317 100 <- Minus
3L 13909832..13910215 1421..1804 100 <- Minus
3L 13910484..13910585 1319..1420 100 <- Minus
3L 13913962..13914525 755..1318 100 <- Minus
3L 13919191..13919944 1..754 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:23:25 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13906901..13908969 2471..4539 100 <- Minus
3L 13909031..13909183 2318..2470 100 <- Minus
3L 13909256..13909768 1805..2317 100 <- Minus
3L 13909832..13910215 1421..1804 100 <- Minus
3L 13910484..13910585 1319..1420 100 <- Minus
3L 13913962..13914525 755..1318 100 <- Minus
3L 13919191..13919944 1..754 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:48:29 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13900001..13902069 2471..4539 100 <- Minus
arm_3L 13902131..13902283 2318..2470 100 <- Minus
arm_3L 13902356..13902868 1805..2317 100 <- Minus
arm_3L 13902932..13903315 1421..1804 100 <- Minus
arm_3L 13903584..13903685 1319..1420 100 <- Minus
arm_3L 13907062..13907625 755..1318 100 <- Minus
arm_3L 13912291..13913044 1..754 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:25:23 Download gff for LD16082.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13900001..13902069 2471..4539 100 <- Minus
3L 13902131..13902283 2318..2470 100 <- Minus
3L 13902356..13902868 1805..2317 100 <- Minus
3L 13902932..13903315 1421..1804 100 <- Minus
3L 13903584..13903685 1319..1420 100 <- Minus
3L 13907062..13907625 755..1318 100 <- Minus
3L 13912291..13913044 1..754 100   Minus

LD16082.pep Sequence

Translation from 751 to 3615

> LD16082.pep
MNFTSRANCKCPHSQKHQQKPALIKSHTCAYQLQDLTGYNRALMPPLDNT
DFSNAWRQVNNNTTSQSCAYHQQRQQQQQQQDAKDSKRHYHHHTCPRQRK
KSMTPVEPTHLCQKHQEAKQRRSRSASAKPRRNSSYHSYDDLDVSSAVLN
AERKVVASLKYLCACTGATLRNLSKKTKDLHAKNYTYTKPTWRLWGEEHE
KNAIFTVYLKKVRYHRPTPTASNDSDDEISHLEWETVRVRFVKAATLARL
VEALATDDGELESTFINVFLSTYRTFSTPKQVLSLLTQRYDALHEKHLEE
LEQAQQNGQVMDPAYDPHASIHEQHKKTLVSALHVWLDGFPEDWHEDNLQ
QILAFATKRLKRSDLHIKVLNRLERLIKQSLYGNGGGSGGSENNGHSWLS
AARSQQMQQFMIPTHYGSSYDLTDQFNGMYLSPMGHGPIYRGPTHFLQAF
RFPHVPVRHFAEQLTRMDTELFKRLIPHQCLGHTWARRDSGGSETVVATI
NQFNAVLFRVVSSILIDRLKPQERALNISRWIDIAQELRMLKNFSSLKAI
ISALNSNSIYRLSKIWEVLPKERMEVFTELANICSEDNNAWTLREVLKRE
GTAKNPDPGSDHSDRHLQKLILNLGTQTSHGTIPYLGTFLTDLTMIHTAN
PDYLTENKLINFDKKRKEFEVLAQIKLLQGAANTYNLQADALFDHWFNSM
PVFDEREAFELSCRLEPPPPAPRKSVVSTNTSLTNTTASSTASIMGHRKT
DSIHSNSSSGAGSQFYCELNSSTSSRHNSLDRDVHHQHASLMSASSSVSN
LSLDSSNSGGRQSGKLTHSQSMGNGLKSHGNGTTNGGSPHINAQLVQPSS
GTPHSAPDFYIIRVTYETDNIELDGIVLYKSIMLGNNERTPQVIRNAMLK
LGLEDDPDRFTLAQVLPDKELVMPKNANVYYAVNTNYNLNFILRPRKEEG
VAGS*

LD16082.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:41:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10405-PA 958 GF10405-PA 9..958 1..954 4470 92.2 Plus
Dana\GF11409-PA 697 GF11409-PA 145..330 435..651 239 33 Plus
Dana\GF14259-PA 1587 GF14259-PA 824..1036 460..704 208 23.7 Plus
Dana\GF14515-PA 1577 GF14515-PA 862..1060 452..675 168 25.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:41:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13748-PA 962 GG13748-PA 9..962 1..954 5027 96.9 Plus
Dere\GG20630-PA 702 GG20630-PA 148..333 435..651 242 33 Plus
Dere\GG23884-PA 1582 GG23884-PA 829..1041 460..704 211 24.9 Plus
Dere\GG10404-PA 1566 GG10404-PA 862..1060 452..675 167 25 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:41:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16726-PA 995 GH16726-PA 9..994 1..952 3845 79.8 Plus
Dgri\GH11116-PA 1595 GH11116-PA 590..1056 221..724 275 23.2 Plus
Dgri\GH20366-PA 699 GH20366-PA 146..331 435..651 242 33.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:49:03
Subject Length Description Subject Range Query Range Score Percent Strand
Rgl-PE 973 CG8865-PE 1..954 1..954 5028 100 Plus
Rgl-PA 954 CG8865-PA 1..954 1..954 5028 100 Plus
Rgl-PC 774 CG8865-PC 2..774 182..954 4007 99.1 Plus
Rgl-PD 774 CG8865-PD 2..774 182..954 4007 99.1 Plus
Rgl-PB 774 CG8865-PB 2..774 182..954 4007 99.1 Plus
CG5522-PF 665 CG5522-PF 149..514 436..799 259 28 Plus
CG5522-PC 665 CG5522-PC 149..514 436..799 259 28 Plus
CG5522-PD 665 CG5522-PD 149..514 436..799 259 28 Plus
CG5522-PB 702 CG5522-PB 149..536 436..806 244 26.4 Plus
CG5522-PE 702 CG5522-PE 149..536 436..806 244 26.4 Plus
CG5522-PA 702 CG5522-PA 149..536 436..806 244 26.4 Plus
Sos-PA 1596 CG7793-PA 834..1203 461..841 229 22.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:41:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13456-PA 995 GI13456-PA 9..993 1..953 3903 80.7 Plus
Dmoj\GI18240-PA 1592 GI18240-PA 590..1046 221..717 285 23.7 Plus
Dmoj\GI20039-PA 697 GI20039-PA 143..328 435..651 240 33.5 Plus
Dmoj\GI11520-PA 1588 GI11520-PA 856..1056 444..675 161 25 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:41:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15691-PA 925 GL15691-PA 9..808 1..786 3588 87.3 Plus
Dper\GL15691-PA 925 GL15691-PA 837..925 866..954 480 98.9 Plus
Dper\GL17736-PA 703 GL17736-PA 150..335 435..651 236 33 Plus
Dper\GL25520-PA 1620 GL25520-PA 866..1064 452..675 159 25 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:41:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21377-PA 976 GA21377-PA 9..976 1..954 4259 87.9 Plus
Dpse\GA18948-PB 666 GA18948-PB 150..335 435..651 237 33 Plus
Dpse\GA18948-PA 703 GA18948-PA 150..335 435..651 236 33 Plus
Dpse\GA21827-PA 1614 GA21827-PA 866..1064 452..675 159 25 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:41:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24573-PA 980 GM24573-PA 30..980 1..954 5121 99.1 Plus
Dsec\GM15254-PA 1580 GM15254-PA 817..1029 460..704 212 24.9 Plus
Dsec\GM18620-PA 1545 GM18620-PA 840..1038 452..675 166 25 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:41:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12645-PA 926 GD12645-PA 9..926 1..954 4910 95.8 Plus
Dsim\GD11219-PA 702 GD11219-PA 148..333 435..651 242 33 Plus
Dsim\Sos-PA 1595 GD23927-PA 832..1044 460..704 212 24.9 Plus
Dsim\GD23402-PA 784 GD23402-PA 79..277 452..675 166 25 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:41:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11816-PA 976 GJ11816-PA 9..976 1..954 4087 84.3 Plus
Dvir\GJ21283-PA 699 GJ21283-PA 146..331 435..651 246 33.5 Plus
Dvir\GJ18146-PA 1597 GJ18146-PA 814..1057 461..724 209 24.6 Plus
Dvir\GJ12795-PA 1593 GJ12795-PA 854..1054 444..675 158 25 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:41:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12433-PA 1001 GK12433-PA 9..999 1..953 4000 81.3 Plus
Dwil\GK21520-PA 691 GK21520-PA 137..322 435..651 239 33.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:41:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20045-PA 952 GE20045-PA 9..952 1..954 4969 96.1 Plus
Dyak\GE11819-PA 702 GE11819-PA 148..333 435..651 242 33 Plus
Dyak\GE18685-PA 1585 GE18685-PA 830..1042 460..704 212 24.9 Plus
Dyak\GE13791-PA 1569 GE13791-PA 863..1061 452..675 166 25 Plus

LD16082.hyp Sequence

Translation from 751 to 3615

> LD16082.hyp
MNFTSRANCKCPHSQKHQQKPALIKSHTCAYQLQDLTGYNRALMPPLDNT
DFSNAWRQVNNNTTSQSCAYHQQRQQQQQQQDAKDSKRHYHHHTCPRQRK
KSMTPVEPTHLCQKHQEAKQRRSRSASAKPRRNSSYHSYDDLDVSSAVLN
AERKVVASLKYLCACTGATLRNLSKKTKDLHAKNYTYTKPTWRLWGEEHE
KNAIFTVYLKKVRYHRPTPTASNDSDDEISHLEWETVRVRFVKAATLARL
VEALATDDGELESTFINVFLSTYRTFSTPKQVLSLLTQRYDALHEKHLEE
LEQAQQNGQVMDPAYDPHASIHEQHKKTLVSALHVWLDGFPEDWHEDNLQ
QILAFATKRLKRSDLHIKVLNRLERLIKQSLYGNGGGSGGSENNGHSWLS
AARSQQMQQFMIPTHYGSSYDLTDQFNGMYLSPMGHGPIYRGPTHFLQAF
RFPHVPVRHFAEQLTRMDTELFKRLIPHQCLGHTWARRDSGGSETVVATI
NQFNAVLFRVVSSILIDRLKPQERALNISRWIDIAQELRMLKNFSSLKAI
ISALNSNSIYRLSKIWEVLPKERMEVFTELANICSEDNNAWTLREVLKRE
GTAKNPDPGSDHSDRHLQKLILNLGTQTSHGTIPYLGTFLTDLTMIHTAN
PDYLTENKLINFDKKRKEFEVLAQIKLLQGAANTYNLQADALFDHWFNSM
PVFDEREAFELSCRLEPPPPAPRKSVVSTNTSLTNTTASSTASIMGHRKT
DSIHSNSSSGAGSQFYCELNSSTSSRHNSLDRDVHHQHASLMSASSSVSN
LSLDSSNSGGRQSGKLTHSQSMGNGLKSHGNGTTNGGSPHINAQLVQPSS
GTPHSAPDFYIIRVTYETDNIELDGIVLYKSIMLGNNERTPQVIRNAMLK
LGLEDDPDRFTLAQVLPDKELVMPKNANVYYAVNTNYNLNFILRPRKEEG
VAGS*

LD16082.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:28:05
Subject Length Description Subject Range Query Range Score Percent Strand
Rgl-PE 973 CG8865-PE 1..954 1..954 5028 100 Plus
Rgl-PA 954 CG8865-PA 1..954 1..954 5028 100 Plus
Rgl-PC 774 CG8865-PC 2..774 182..954 4007 99.1 Plus
Rgl-PD 774 CG8865-PD 2..774 182..954 4007 99.1 Plus
Rgl-PB 774 CG8865-PB 2..774 182..954 4007 99.1 Plus