Clone LD16125 Report

Search the DGRC for LD16125

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:161
Well:25
Vector:pBS SK-
Associated Gene/Transcripten-RA
Protein status:LD16125.pep: gold
Preliminary Size:2370
Sequenced Size:2458

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9015 2001-01-01 Release 2 assignment
CG9015 2001-11-29 Blastp of sequenced clone
CG9015 2003-01-01 Sim4 clustering to Release 3
en 2008-04-29 Release 5.5 accounting
en 2008-08-15 Release 5.9 accounting
en 2008-12-18 5.12 accounting

Clone Sequence Records

LD16125.complete Sequence

2458 bp (2458 high quality bases) assembled on 2001-11-29

GenBank Submission: AY069448

> LD16125.complete
CTCGATGTGAACAGACGTGCGTGTCGGAACAACAGTTGCAAATCAAACAC
GAAAGCATAAGCCAAACAAAAAACACCAAACAGAGAAGAGAATCAGAAGA
TTCTGAGCAATCAGAAGAATCAGTGGCTCAGTGTCAAGTGACCCAGTGAC
AAGTGTCTTAAGCGAGTTGCGATTTAGCACCAAGTCGAAACCAATGGCCC
TGGAGGATCGCTGCAGTCCACAGTCAGCGCCCAGCCCCATTACCCTACAA
ATGCAGCATCTTCACCACCAGCAACAGCAGCAGCAGCAACAGCAGCAGCA
AATGCAGCACCTCCACCAGCTGCAGCAACTGCAGCAGTTGCACCAACAGC
AACTGGCCGCCGGTGTCTTCCACCATCCGGCAATGGCCTTCGATGCCGCT
GCAGCCGCCGCTGCTGCAGCTGCTGCTGCGGCCGCCCACGCTCATGCTGC
TGCACTGCAGCAGCGCCTCAGTGGCAGTGGATCGCCCGCATCCTGCTCCA
CGCCCGCCTCGTCCACGCCGCTGACCATCAAGGAGGAGGAAAGCGACTCC
GTGATCGGTGACATGAGTTTCCACAATCAGACGCACACCACCAACGAGGA
GGAGGAGGCGGAGGAGGATGACGACATTGATGTGGATGTGGATGATACGT
CGGCGGGCGGACGCCTGCCACCACCCGCCCACCAGCAGCAGTCGACGGCC
AAGCCCTCGCTGGCCTTTTCCATCTCCAACATCCTGAGCGATCGTTTCGG
AGATGTCCAGAAGCCGGGCAAGTCGATGGAGAACCAGGCCAGCATATTCC
GCCCCTTCGAGGCGAGTCGTTCCCAGACTGCCACGCCCTCCGCCTTTACA
AGAGTGGATCTGCTGGAGTTTAGCCGGCAACAGCAGGCTGCCGCCGCAGC
CGCTACTGCGGCCATGATGCTGGAACGGGCCAACTTCCTTAACTGCTTCA
ATCCGGCTGCCTATCCCAGGATACACGAGGAAATCGTGCAGAGTCGGCTG
CGCAGGAGTGCAGCCAATGCCGTCATCCCGCCGCCCATGAGCTCCAAGAT
GAGCGATGCCAATCCAGAGAAATCTGCTCTGGGATCCCTGTGCAAGGCGG
TCTCGCAGATCGGACAACCTGCTGCCCCTACGATGACCCAACCTCCGCTG
AGTAGCAGTGCCAGCAGCTTGGCCAGTCCGCCACCCGCCTCCAATGCCTC
GACCATTAGCAGCACCTCTTCCGTGGCCACCAGCTCGAGCTCCTCCTCGT
CGGGTTGCTCCTCGGCGGCCAGTTCCTTGAACTCCTCGCCCAGTAGCCGA
CTGGGAGCCAGTGGATCCGGAGTCAATGCCAGCAGTCCCCAGCCGCAGCC
AATCCCGCCGCCATCCGCCGTTAGCCGAGATTCCGGAATGGAGTCCTCGG
ATGACACGCGTTCCGAGACGGGATCCACCACCACAGAGGGCGGCAAGAAC
GAGATGTGGCCCGCCTGGGTGTACTGCACCCGCTACAGCGATCGTCCCAG
CTCAGGACCCCGCTACCGCCGCCCCAAACAGCCAAAGGACAAGACCAACG
ACGAGAAGCGTCCACGCACCGCGTTCTCCAGCGAGCAGTTGGCCCGCCTT
AAGCGGGAGTTCAACGAGAATCGCTATCTGACCGAGCGGAGACGCCAGCA
GCTGAGCAGCGAGTTGGGCCTGAACGAGGCGCAGATCAAGATCTGGTTCC
AGAACAAGCGGGCCAAGATCAAGAAGTCGACGGGCTCCAAAAATCCGCTG
GCACTGCAGCTGATGGCCCAGGGATTGTACAACCACACCACCGTGCCGCT
GACCAAGGAGGAGGAGGAGCTCGAGATGCGCATGAACGGGCAGATCCCCT
AAGCGCTGACCAATGGTTACCCATAAGGGGTTACTCCTTCTGACGGGGGC
GTGCAATATTCGAGGGCGTACAAATGGTTTTCATGTGATATAATTGTAGC
GTACATATGTTTTTGTATATATCTCTAAAAATATATATATATATACGTAT
AATCCTAACCTAGAGTAAGACCCATCCGTAGCGAATTCGAGCTGTAAGTT
GTTGGCGTATTTATTTAACCACCCCTGGATAGCCGAAAGTATTATCGTAA
TCACCCGACACAAAGCCTATCGCTATCGCCGCACTTCAAAAGCTTCGACC
TTCAGACGTTTATTCCTACACAAAACACTATCTATAGTTATTACTCCCTA
TAAATTACGCGCTTGCAACCGCTCTGTAAATTAAGTAACTTAACAGTTCC
CTAGCTTAATTCCTAGTTTACACACTTAAGGATTGCTATGAAAGAGTATT
TTAGTTTCTAAGCGAAATGTTAACGAGCAACTAATAGCTGGCAAATGCAC
CTAAGAAAATAACAACGAAATGTTTGTGCTAAAGCAAGTTCATGAAAAGA
AAATTAAAAACAAAATAAAAGAATTATGGAAAAAAATTAAAAAAAAAAAA
AAAAAAAA

LD16125.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:53:05
Subject Length Description Subject Range Query Range Score Percent Strand
en-RB 2841 en-RB 395..2836 1..2442 12210 100 Plus
en-RA 2841 en-RA 395..2836 1..2442 12210 100 Plus
inv-RC 2308 inv-RC 1811..2047 1585..1821 705 86.4 Plus
inv-RC 2308 inv-RC 1614..1663 1457..1506 205 94 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:21:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 7413767..7415272 1506..1 7395 99.4 Minus
chr2R 21145070 chr2R 7411426..7412259 2435..1602 4155 99.9 Minus
chr2R 21145070 chr2R 7394080..7394294 1607..1821 685 87.9 Plus
chr2R 21145070 chr2R 7412536..7412636 1603..1503 490 99 Minus
chr2R 21145070 chr2R 7364675..7364724 1457..1506 205 94 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:03:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:21:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11526358..11527863 1506..1 7530 100 Minus
2R 25286936 2R 11524009..11524849 2442..1602 4205 100 Minus
2R 25286936 2R 11506652..11506866 1607..1821 670 87.4 Plus
2R 25286936 2R 11525128..11525228 1603..1503 505 100 Minus
2R 25286936 2R 11477221..11477270 1457..1506 205 94 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:18:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 11527557..11529062 1506..1 7530 100 Minus
2R 25260384 2R 11525208..11526048 2442..1602 4205 100 Minus
2R 25260384 2R 11507851..11508065 1607..1821 670 87.4 Plus
2R 25260384 2R 11526327..11526427 1603..1503 505 100 Minus
2R 25260384 2R 11478420..11478469 1457..1506 205 94 Plus
Blast to na_te.dros performed 2019-03-16 11:21:43
Subject Length Description Subject Range Query Range Score Percent Strand
S2 1735 S2 S2 1735bp 1548..1644 2024..1923 128 62.7 Minus
accord 7404 accord ACCORD 7404bp 6065..6233 27..190 119 57.1 Plus

LD16125.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:22:45 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 7411424..7412257 1604..2438 93 <- Minus
chr2R 7412536..7412633 1506..1603 98 <- Minus
chr2R 7413768..7414919 354..1505 96 == Minus
chr2R 7415009..7415272 1..264 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:51:00 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
en-RA 1..1659 194..1852 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:23:22 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
en-RA 1..1659 194..1852 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:13:09 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
en-RB 1..1659 194..1852 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:49:57 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
en-RA 1..1659 194..1852 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:13:59 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
en-RB 1..1659 194..1852 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:58:27 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
en-RA 21..2458 1..2438 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:23:22 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
en-RA 21..2458 1..2438 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:13:09 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
en-RB 348..2785 1..2438 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:49:57 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
en-RA 21..2458 1..2438 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:13:59 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
en-RB 348..2785 1..2438 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:22:45 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11524013..11524847 1604..2438 100 <- Minus
2R 11525128..11525225 1506..1603 100 <- Minus
2R 11526359..11527863 1..1505 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:22:45 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11524013..11524847 1604..2438 100 <- Minus
2R 11525128..11525225 1506..1603 100 <- Minus
2R 11526359..11527863 1..1505 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:22:45 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11524013..11524847 1604..2438 100 <- Minus
2R 11525128..11525225 1506..1603 100 <- Minus
2R 11526359..11527863 1..1505 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:13:09 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7411518..7412352 1604..2438 100 <- Minus
arm_2R 7412633..7412730 1506..1603 100 <- Minus
arm_2R 7413864..7415368 1..1505 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:26:25 Download gff for LD16125.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11525212..11526046 1604..2438 100 <- Minus
2R 11526327..11526424 1506..1603 100 <- Minus
2R 11527558..11529062 1..1505 100   Minus

LD16125.pep Sequence

Translation from 193 to 1851

> LD16125.pep
MALEDRCSPQSAPSPITLQMQHLHHQQQQQQQQQQQMQHLHQLQQLQQLH
QQQLAAGVFHHPAMAFDAAAAAAAAAAAAAAHAHAAALQQRLSGSGSPAS
CSTPASSTPLTIKEEESDSVIGDMSFHNQTHTTNEEEEAEEDDDIDVDVD
DTSAGGRLPPPAHQQQSTAKPSLAFSISNILSDRFGDVQKPGKSMENQAS
IFRPFEASRSQTATPSAFTRVDLLEFSRQQQAAAAAATAAMMLERANFLN
CFNPAAYPRIHEEIVQSRLRRSAANAVIPPPMSSKMSDANPEKSALGSLC
KAVSQIGQPAAPTMTQPPLSSSASSLASPPPASNASTISSTSSVATSSSS
SSSGCSSAASSLNSSPSSRLGASGSGVNASSPQPQPIPPPSAVSRDSGME
SSDDTRSETGSTTTEGGKNEMWPAWVYCTRYSDRPSSGPRYRRPKQPKDK
TNDEKRPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKI
WFQNKRAKIKKSTGSKNPLALQLMAQGLYNHTTVPLTKEEEELEMRMNGQ
IP*

LD16125.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:49:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12393-PA 562 GF12393-PA 1..562 1..552 1844 84.9 Plus
Dana\GF12559-PA 577 GF12559-PA 419..560 421..538 526 70.4 Plus
Dana\GF17792-PA 582 GF17792-PA 368..424 455..511 186 56.1 Plus
Dana\GF10750-PA 307 GF10750-PA 212..280 449..518 185 51.4 Plus
Dana\GF23802-PA 532 GF23802-PA 451..508 455..512 185 51.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:49:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22644-PA 553 GG22644-PA 1..553 1..552 2876 98.7 Plus
Dere\GG20207-PA 580 GG20207-PA 410..555 415..538 530 66.4 Plus
Dere\GG10258-PA 252 GG10258-PA 44..109 455..520 199 56.1 Plus
Dere\GG13676-PA 579 GG13676-PA 367..423 455..511 186 56.1 Plus
Dere\GG13695-PA 319 GG13695-PA 221..289 449..518 183 51.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:49:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20500-PA 586 GH20500-PA 1..586 1..552 1532 69.2 Plus
Dgri\GH23539-PA 130 GH23539-PA 1..130 423..552 708 99.2 Plus
Dgri\GH21390-PA 628 GH21390-PA 462..604 421..538 530 68.5 Plus
Dgri\GH16676-PA 316 GH16676-PA 222..290 449..518 184 51.4 Plus
Dgri\GH18130-PA 314 GH18130-PA 39..95 455..511 182 61.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:47:04
Subject Length Description Subject Range Query Range Score Percent Strand
en-PA 552 CG9015-PA 1..552 1..552 2805 100 Plus
en-PB 552 CG9015-PB 1..552 1..552 2805 100 Plus
inv-PE 576 CG17835-PE 294..561 291..544 576 45.8 Plus
inv-PB 576 CG17835-PB 294..561 291..544 576 45.8 Plus
inv-PD 576 CG17835-PD 294..561 291..544 576 45.8 Plus
NK7.1-PD 721 CG8524-PD 31..456 27..517 220 22.3 Plus
NK7.1-PC 721 CG8524-PC 31..456 27..517 220 22.3 Plus
NK7.1-PB 721 CG8524-PB 31..456 27..517 220 22.3 Plus
NK7.1-PA 721 CG8524-PA 31..456 27..517 220 22.3 Plus
Vsx1-PB 837 CG4136-PB 653..798 19..150 204 39.7 Plus
Vsx1-PA 837 CG4136-PA 653..798 19..150 204 39.7 Plus
Dr-PA 515 CG1897-PA 65..478 100..511 200 23.6 Plus
zen2-PB 232 CG1048-PB 13..113 444..544 199 41.6 Plus
zen2-PA 252 CG1048-PA 33..133 444..544 199 41.6 Plus
Scr-PB 417 CG1030-PB 130..381 228..511 198 27.2 Plus
Scr-PA 417 CG1030-PA 130..381 228..511 198 27.2 Plus
abd-A-PB 590 CG10325-PB 23..455 60..511 195 24.3 Plus
ind-PB 320 CG11551-PB 81..290 302..518 188 32.2 Plus
vnd-PB 577 CG6172-PB 69..461 67..516 176 22.8 Plus
vnd-PA 723 CG6172-PA 215..607 67..516 176 22.8 Plus
unpg-PA 485 CG1650-PA 209..376 310..511 174 28.7 Plus
Alh-PM 1084 CG1070-PM 594..943 68..414 172 24.5 Plus
Alh-PI 1134 CG1070-PI 594..943 68..414 172 24.5 Plus
Alh-PH 1165 CG1070-PH 594..943 68..414 172 24.5 Plus
Alh-PJ 1448 CG1070-PJ 594..943 68..414 172 24.5 Plus
exex-PA 525 CG8254-PA 440..497 455..512 169 51.7 Plus
CG34031-PC 219 CG34031-PC 125..219 445..538 167 42.7 Plus
cad-PB 427 CG1759-PB 119..330 320..511 167 26.1 Plus
cad-PA 427 CG1759-PA 119..330 320..511 167 26.1 Plus
B-H1-PA 544 CG5529-PA 116..367 284..526 167 21.9 Plus
Dfd-PA 586 CG2189-PA 365..429 453..517 167 50.8 Plus
Alh-PN 1052 CG1070-PN 594..953 68..419 167 24.9 Plus
Alh-PO 1133 CG1070-PO 594..953 68..419 167 24.9 Plus
ASPP-PA 1020 CG18375-PA 278..611 19..399 166 24.3 Plus
ASPP-PC 1046 CG18375-PC 278..611 19..399 166 24.3 Plus
ASPP-PB 1069 CG18375-PB 327..660 19..399 166 24.3 Plus
cad-PC 445 CG1759-PC 119..348 320..511 165 26.1 Plus
toe-PA 640 CG10704-PA 274..441 311..511 164 26.4 Plus
B-H2-PA 645 CG5488-PA 277..448 333..526 164 25.3 Plus
lab-PB 213 CG1264-PB 82..142 451..511 163 50.8 Plus
ro-PB 350 CG6348-PB 187..248 450..511 163 51.6 Plus
ro-PA 350 CG6348-PA 187..248 450..511 163 51.6 Plus
zen-PA 353 CG1046-PA 78..163 444..526 163 44.2 Plus
lab-PA 629 CG1264-PA 498..558 451..511 163 50.8 Plus
lms-PC 378 CG13424-PC 86..159 454..526 162 48.6 Plus
lms-PB 378 CG13424-PB 86..159 454..526 162 48.6 Plus
Antp-PF 365 CG1028-PF 269..346 439..516 159 43.6 Plus
Antp-PE 365 CG1028-PE 269..346 439..516 159 43.6 Plus
Antp-PJ 378 CG1028-PJ 282..359 439..516 159 43.6 Plus
Antp-PI 378 CG1028-PI 282..359 439..516 159 43.6 Plus
Antp-PL 378 CG1028-PL 282..359 439..516 159 43.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:49:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21047-PA 596 GI21047-PA 92..596 55..552 1503 73.3 Plus
Dmoj\GI18568-PA 307 GI18568-PA 199..283 454..538 416 87.1 Plus
Dmoj\GI11362-PA 317 GI11362-PA 228..296 449..518 188 51.4 Plus
Dmoj\GI24717-PA 592 GI24717-PA 358..414 455..511 186 56.1 Plus
Dmoj\GI22889-PA 234 GI22889-PA 36..92 455..511 182 61.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:49:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10677-PA 562 GL10677-PA 1..562 1..552 1696 77.3 Plus
Dper\GL11415-PA 625 GL11415-PA 467..604 421..538 527 71.7 Plus
Dper\GL22053-PA 644 GL22053-PA 510..593 452..540 188 43.8 Plus
Dper\GL22041-PA 602 GL22041-PA 373..429 455..511 187 56.1 Plus
Dper\GL25910-PA 316 GL25910-PA 220..288 449..518 185 51.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:49:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\en-PA 576 GA21479-PA 1..576 1..552 1682 75.8 Plus
Dpse\GA14690-PA 622 GA14690-PA 464..601 421..538 527 71.7 Plus
Dpse\lab-PA 691 GA11733-PA 552..635 452..540 191 44.9 Plus
Dpse\GA23649-PA 315 GA23649-PA 219..287 449..518 186 51.4 Plus
Dpse\lab-PB 257 GA11733-PB 124..201 458..540 180 47 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:49:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\en-PA 550 GM20424-PA 1..550 1..552 2876 99.1 Plus
Dsec\GM21295-PA 574 GM21295-PA 403..553 409..538 533 66.2 Plus
Dsec\GM10529-PA 252 GM10529-PA 44..109 455..520 198 56.1 Plus
Dsec\GM10914-PA 582 GM10914-PA 367..423 455..511 186 56.1 Plus
Dsec\GM24515-PA 308 GM24515-PA 210..278 449..518 182 51.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:49:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\en-PA 555 GD25898-PA 1..555 1..552 2892 99.1 Plus
Dsim\GD10802-PA 452 GD10802-PA 346..431 453..538 409 84.9 Plus
Dsim\GD19524-PA 252 GD19524-PA 44..105 455..516 197 59.7 Plus
Dsim\GD19895-PA 582 GD19895-PA 367..423 455..511 186 56.1 Plus
Dsim\GD12586-PA 319 GD12586-PA 221..289 449..518 183 51.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:49:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\en-PA 584 GJ21969-PA 1..584 1..552 1547 66.2 Plus
Dvir\GJ20363-PA 610 GJ20363-PA 444..584 421..538 529 70.2 Plus
Dvir\GJ11617-PA 317 GJ11617-PA 222..290 449..518 186 51.4 Plus
Dvir\GJ23303-PA 322 GJ23303-PA 45..115 452..528 182 50.6 Plus
Dvir\GJ23932-PA 253 GJ23932-PA 40..96 455..511 180 56.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:49:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22225-PA 563 GK22225-PA 1..563 1..552 1564 71.8 Plus
Dwil\GK22074-PA 578 GK22074-PA 419..556 417..538 533 72.5 Plus
Dwil\GK10829-PA 351 GK10829-PA 79..145 455..520 187 55.2 Plus
Dwil\GK17410-PA 307 GK17410-PA 210..278 449..518 185 51.4 Plus
Dwil\GK12250-PA 233 GK12250-PA 41..97 455..511 181 57.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:49:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13516-PA 552 GE13516-PA 1..552 1..552 2899 99.5 Plus
Dyak\GE12367-PA 296 GE12367-PA 147..273 435..538 426 64.6 Plus
Dyak\GE25832-PA 252 GE25832-PA 44..105 455..516 198 59.7 Plus
Dyak\GE24883-PA 588 GE24883-PA 372..428 455..511 186 56.1 Plus
Dyak\GE19990-PA 324 GE19990-PA 226..294 449..518 184 51.4 Plus

LD16125.hyp Sequence

Translation from 193 to 1851

> LD16125.hyp
MALEDRCSPQSAPSPITLQMQHLHHQQQQQQQQQQQMQHLHQLQQLQQLH
QQQLAAGVFHHPAMAFDAAAAAAAAAAAAAAHAHAAALQQRLSGSGSPAS
CSTPASSTPLTIKEEESDSVIGDMSFHNQTHTTNEEEEAEEDDDIDVDVD
DTSAGGRLPPPAHQQQSTAKPSLAFSISNILSDRFGDVQKPGKSMENQAS
IFRPFEASRSQTATPSAFTRVDLLEFSRQQQAAAAAATAAMMLERANFLN
CFNPAAYPRIHEEIVQSRLRRSAANAVIPPPMSSKMSDANPEKSALGSLC
KAVSQIGQPAAPTMTQPPLSSSASSLASPPPASNASTISSTSSVATSSSS
SSSGCSSAASSLNSSPSSRLGASGSGVNASSPQPQPIPPPSAVSRDSGME
SSDDTRSETGSTTTEGGKNEMWPAWVYCTRYSDRPSSGPRYRRPKQPKDK
TNDEKRPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKI
WFQNKRAKIKKSTGSKNPLALQLMAQGLYNHTTVPLTKEEEELEMRMNGQ
IP*

LD16125.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:18:47
Subject Length Description Subject Range Query Range Score Percent Strand
en-PA 552 CG9015-PA 1..552 1..552 2805 100 Plus
en-PB 552 CG9015-PB 1..552 1..552 2805 100 Plus
inv-PE 576 CG17835-PE 294..561 291..544 576 45.8 Plus
inv-PB 576 CG17835-PB 294..561 291..544 576 45.8 Plus
inv-PD 576 CG17835-PD 294..561 291..544 576 45.8 Plus