![]() | BDGP Sequence Production Resources |
Search the DGRC for LD16147
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 161 |
Well: | 47 |
Vector: | pBS SK- |
Associated Gene/Transcript | cold-RA |
Protein status: | LD16147.pep: gold |
Preliminary Size: | 1671 |
Sequenced Size: | 1077 |
Gene | Date | Evidence |
---|---|---|
CG2813 | 2001-01-01 | Release 2 assignment |
CG2813 | 2001-10-10 | Blastp of sequenced clone |
CG2813 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2813 | 2008-04-29 | Release 5.5 accounting |
CG2813 | 2008-08-15 | Release 5.9 accounting |
CG2813 | 2008-12-18 | 5.12 accounting |
1077 bp (1077 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061213
> LD16147.complete TTTTTTTGGGAGTGGTTTTGTTTGTTAATTTGACTTGTTTATTTACTTTG AGCTTATCGGCTCCGATTGCGTTAATTACTCCAGATATACGATGAAATCG TGGGAGATAGCTGTGGTGCTAGTCGCCGCTGTTTACTTGTGTTCGCAAGT AAATTTCGTGGCCGGTCTGGAGTGCTATGTCTGCTCCAACCAGACGGGCA ACACGGAGAAGTGCCTGAACACCATCAAGACCTGCGAGCCCTTTGAAAAC GTCTGCGGAACGGAGATCCGCTGGGGATCCCAGCCGTACTTCTCGGAGGG TGCTCTTAAGCAATACTACGTGTCCAAGAGGTGCATGACCAAGGAGCAGT GCCAGTCCAAGAGGAAGCGCTATATGCAGCTGTACTGCACCCACATCTGG TACGAGGATTGGGCGTGCAACGAGTGCTGCAAGGGAGATCGGTGCAACTA CTTTGTCATTAGTGGCGCTCCTTCAAGACAAGGCTATGGTGTCTGTTTAA CCCTGCTCACCGCACTATTAGGACTTGGATCTTGGCTCATTCCACGCTCT TAGCCTCAAGAGCCTTTGCTATACCAAGCACATTTCGCTTTTTGTATTAT TTAAACGAAGCCGTCCATAAGCTAAGTAGATTCCACACTCCATTTAAAAC TACACCGTCAAAGTGCCTTGACTCAGTTGGGAAGTAATGCCATTTACTAT CCTGATGCCTTGCGAAGCGAAGTTTCTTTTCTAATACTTTACATTTTATT TGTAACAAAATTGTTTCTCTGGATTCAAGTTTTTTAGATTTTTTACGTTT ATGGGACAGTTTTTATACTCGTGCATCAATGACAACAAGAGCTATTTTGA TTATTGCTTTATTTCGAATTTTGCTGATGAATACGAATTGCATCCACGAC ATATCCTAGACAAATTATCTAAGAGAAAGCTCAAACATGAACATTAAGCT ACATATAAGAATCAAAAGAATGCCTTAAAAATAACAATCTGTTTCATATC GAATCTCTCCCACAATAAAGCAACTTTGACGTCTTTTTGGCGCTTTAATA TAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 575148..575738 | 461..1051 | 2940 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 574782..575094 | 148..460 | 1565 | 100 | Plus |
chr2L | 23010047 | chr2L | 574554..574702 | 1..149 | 745 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 574784..575094 | 150..460 | 100 | -> | Plus |
chr2L | 574554..574702 | 1..149 | 100 | -> | Plus |
chr2L | 575148..575738 | 461..1051 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2813-RA | 1..462 | 92..553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cold-RA | 1..462 | 92..553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cold-RA | 1..462 | 92..553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2813-RA | 1..462 | 92..553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cold-RA | 1..462 | 92..553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2813-RA | 38..1088 | 1..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cold-RA | 65..1115 | 1..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cold-RA | 43..1093 | 1..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2813-RA | 38..1088 | 1..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cold-RA | 43..1093 | 1..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 575144..575734 | 461..1051 | 100 | Plus | |
2L | 574550..574698 | 1..149 | 100 | -> | Plus |
2L | 574780..575090 | 150..460 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 575144..575734 | 461..1051 | 100 | Plus | |
2L | 574550..574698 | 1..149 | 100 | -> | Plus |
2L | 574780..575090 | 150..460 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 575144..575734 | 461..1051 | 100 | Plus | |
2L | 574550..574698 | 1..149 | 100 | -> | Plus |
2L | 574780..575090 | 150..460 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 574550..574698 | 1..149 | 100 | -> | Plus |
arm_2L | 574780..575090 | 150..460 | 100 | -> | Plus |
arm_2L | 575144..575734 | 461..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 574780..575090 | 150..460 | 100 | -> | Plus |
2L | 575144..575734 | 461..1051 | 100 | Plus | |
2L | 574550..574698 | 1..149 | 100 | -> | Plus |
Translation from 91 to 552
> LD16147.pep MKSWEIAVVLVAAVYLCSQVNFVAGLECYVCSNQTGNTEKCLNTIKTCEP FENVCGTEIRWGSQPYFSEGALKQYYVSKRCMTKEQCQSKRKRYMQLYCT HIWYEDWACNECCKGDRCNYFVISGAPSRQGYGVCLTLLTALLGLGSWLI PRS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15025-PA | 151 | GF15025-PA | 1..146 | 1..146 | 673 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24731-PA | 150 | GG24731-PA | 1..150 | 1..153 | 761 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11235-PA | 153 | GH11235-PA | 1..145 | 1..145 | 645 | 83.4 | Plus |
Dgri\GH11025-PA | 153 | GH11025-PA | 1..145 | 1..145 | 645 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cold-PB | 153 | CG2813-PB | 1..153 | 1..153 | 857 | 100 | Plus |
cold-PA | 153 | CG2813-PA | 1..153 | 1..153 | 857 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21798-PA | 153 | GI21798-PA | 1..132 | 1..132 | 655 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18887-PA | 153 | GL18887-PA | 1..153 | 1..153 | 690 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15471-PA | 153 | GA15471-PA | 1..153 | 1..153 | 690 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16753-PA | 153 | GM16753-PA | 1..153 | 1..153 | 806 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23035-PA | 153 | GD23035-PA | 1..153 | 1..153 | 811 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17787-PA | 153 | GJ17787-PA | 1..144 | 1..146 | 670 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24417-PA | 155 | GK24417-PA | 2..129 | 1..128 | 623 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16935-PA | 153 | GE16935-PA | 1..153 | 1..153 | 777 | 94.8 | Plus |
Translation from 91 to 552
> LD16147.hyp MKSWEIAVVLVAAVYLCSQVNFVAGLECYVCSNQTGNTEKCLNTIKTCEP FENVCGTEIRWGSQPYFSEGALKQYYVSKRCMTKEQCQSKRKRYMQLYCT HIWYEDWACNECCKGDRCNYFVISGAPSRQGYGVCLTLLTALLGLGSWLI PRS*