![]() | BDGP Sequence Production Resources |
Search the DGRC for LD16161
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 161 |
Well: | 61 |
Vector: | pBS SK- |
Associated Gene/Transcript | Gas41-RA |
Protein status: | LD16161.pep: gold |
Preliminary Size: | 965 |
Sequenced Size: | 787 |
Gene | Date | Evidence |
---|---|---|
CG9207 | 2001-01-01 | Release 2 assignment |
CG9207 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9207 | 2003-01-13 | Blastp of sequenced clone |
Gas41 | 2008-04-29 | Release 5.5 accounting |
Gas41 | 2008-08-15 | Release 5.9 accounting |
Gas41 | 2008-12-18 | 5.12 accounting |
787 bp (787 high quality bases) assembled on 2003-01-13
GenBank Submission: AY061214
> LD16161.complete AACTTAAAATCGTTGAATTATGACTGACTTTGGCGGAGACTCGGGTGGCC GACTAAAGGGCGTAACTATAGTAAAGCCCATAGTGTATGGAAACATTGCC AGATCCTTCGGCAAGAAGCGCGAGGAGGACGGACACACGCATCAGTGGAA AGTCTATTTGAAGCCCTATTTCAACGAGGACATGTCCATTTACGTGAAAA AGGTGCATTTCAAGCTGCACGAGAGCTACGCTAATCCGAACAGGATCGTA GTTAAGCCGCCCTACGAGATTACCGAGACCGGATGGGGTGAATTCGAGGT GATCATCAAGATATACTTCAACGATCAATCAGAGCGCCCGGTTACCTGCT ACCACATCCTTAAGCTCTTCCAATCGCCTGTGGTCGATGGCGAGCTCTCC TCTAGCACCACTATGGACACTAAGAAGGGCCTGGTCTCGGAGTCGTATGA GGAAATAGTGTTCCAGGAGCCCACCCAGATCTTGCAGCATTATCTCCTGC TTTCAGAACAGAGCGCCAATGGGTTGCTAACCCATGACACTGACTTTGAG GAAAAGAAGACGAAAACGTTGGACAACATTGTGAATGTAAAACAGAAGGT CAAGGGGGAGATTGTTACACTTAAGGACAAACTAAAGCTGGCACGTGAGA CCATTTCGAAGTTCAAGGCAGAATTGGCGAAGGTGCAGAAGCAACCTGCG TAAAATGTGCATAATTCTCTATAGAAATAATCTAAAAATTATTAATTAAA TAAAATATTGGAAAATGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gas41-RA | 867 | Gas41-RA | 100..867 | 1..768 | 3840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6948438..6948616 | 546..724 | 100 | <- | Minus |
chr2L | 6948675..6949219 | 1..545 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gas41-RA | 1..684 | 20..703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gas41-RA | 1..684 | 20..703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gas41-RA | 1..684 | 20..703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gas41-RA | 1..684 | 20..703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gas41-RA | 1..684 | 20..703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gas41-RA | 1..768 | 1..768 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gas41-RA | 1..768 | 1..768 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gas41-RA | 73..840 | 1..768 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gas41-RA | 1..768 | 1..768 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gas41-RA | 73..840 | 1..768 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6949310..6949532 | 546..768 | 100 | <- | Minus |
2L | 6949591..6950135 | 1..545 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6949310..6949532 | 546..768 | 100 | <- | Minus |
2L | 6949591..6950135 | 1..545 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6949310..6949532 | 546..768 | 100 | <- | Minus |
2L | 6949591..6950135 | 1..545 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6949310..6949532 | 546..768 | 100 | <- | Minus |
arm_2L | 6949591..6950135 | 1..545 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6949310..6949532 | 546..768 | 100 | <- | Minus |
2L | 6949591..6950135 | 1..545 | 100 | Minus |
Translation from 19 to 702
> LD16161.pep MTDFGGDSGGRLKGVTIVKPIVYGNIARSFGKKREEDGHTHQWKVYLKPY FNEDMSIYVKKVHFKLHESYANPNRIVVKPPYEITETGWGEFEVIIKIYF NDQSERPVTCYHILKLFQSPVVDGELSSSTTMDTKKGLVSESYEEIVFQE PTQILQHYLLLSEQSANGLLTHDTDFEEKKTKTLDNIVNVKQKVKGEIVT LKDKLKLARETISKFKAELAKVQKQPA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14466-PA | 227 | GF14466-PA | 1..227 | 1..227 | 1163 | 96 | Plus |
Dana\GF11507-PA | 929 | GF11507-PA | 27..106 | 40..119 | 156 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23565-PA | 228 | GG23565-PA | 1..228 | 1..227 | 1158 | 96.9 | Plus |
Dere\GG16912-PA | 934 | GG16912-PA | 18..104 | 33..119 | 173 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11361-PA | 227 | GH11361-PA | 1..227 | 1..227 | 1138 | 93.4 | Plus |
Dgri\GH18860-PA | 958 | GH18860-PA | 25..90 | 40..105 | 159 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gas41-PA | 227 | CG9207-PA | 1..227 | 1..227 | 1180 | 100 | Plus |
ear-PC | 931 | CG4913-PC | 27..106 | 40..119 | 165 | 38.8 | Plus |
ear-PA | 931 | CG4913-PA | 27..106 | 40..119 | 165 | 38.8 | Plus |
ear-PB | 945 | CG4913-PB | 27..106 | 40..119 | 165 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17738-PA | 227 | GI17738-PA | 1..227 | 1..227 | 1111 | 91.2 | Plus |
Dmoj\GI22931-PA | 955 | GI22931-PA | 23..90 | 38..105 | 155 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25598-PA | 227 | GL25598-PA | 1..227 | 1..227 | 1158 | 93.8 | Plus |
Dper\GL12546-PA | 475 | GL12546-PA | 27..92 | 40..105 | 162 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21613-PA | 227 | GA21613-PA | 1..227 | 1..227 | 1158 | 93.8 | Plus |
Dpse\GA18521-PA | 954 | GA18521-PA | 27..92 | 40..105 | 161 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13720-PA | 227 | GM13720-PA | 1..227 | 1..227 | 1197 | 99.6 | Plus |
Dsec\GM24219-PA | 942 | GM24219-PA | 27..106 | 40..119 | 170 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22526-PA | 227 | GD22526-PA | 1..227 | 1..227 | 1193 | 99.1 | Plus |
Dsim\GD19009-PA | 781 | GD19009-PA | 27..114 | 40..119 | 162 | 37.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17562-PA | 227 | GJ17562-PA | 1..227 | 1..227 | 1122 | 93 | Plus |
Dvir\GJ23215-PA | 966 | GJ23215-PA | 25..90 | 40..105 | 160 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24245-PA | 248 | GK24245-PA | 1..198 | 1..198 | 1010 | 93.9 | Plus |
Dwil\GK11288-PA | 971 | GK11288-PA | 25..92 | 38..105 | 160 | 39.7 | Plus |
Dwil\GK18381-PA | 918 | GK18381-PA | 265..358 | 22..116 | 152 | 33.3 | Plus |
Translation from 19 to 702
> LD16161.hyp MTDFGGDSGGRLKGVTIVKPIVYGNIARSFGKKREEDGHTHQWKVYLKPY FNEDMSIYVKKVHFKLHESYANPNRIVVKPPYEITETGWGEFEVIIKIYF NDQSERPVTCYHILKLFQSPVVDGELSSSTTMDTKKGLVSESYEEIVFQE PTQILQHYLLLSEQSANGLLTHDTDFEEKKTKTLDNIVNVKQKVKGEIVT LKDKLKLARETISKFKAELAKVQKQPA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gas41-PA | 227 | CG9207-PA | 1..227 | 1..227 | 1180 | 100 | Plus |
ear-PC | 931 | CG4913-PC | 27..106 | 40..119 | 165 | 38.8 | Plus |
ear-PA | 931 | CG4913-PA | 27..106 | 40..119 | 165 | 38.8 | Plus |
ear-PB | 945 | CG4913-PB | 27..106 | 40..119 | 165 | 38.8 | Plus |