BDGP Sequence Production Resources |
Search the DGRC for LD16285
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 162 |
Well: | 85 |
Vector: | pBS SK- |
Associated Gene/Transcript | l(2)06496-RA |
Protein status: | LD16285.pep: gold |
Preliminary Size: | 1303 |
Sequenced Size: | 1171 |
Gene | Date | Evidence |
---|---|---|
CG9893 | 2001-01-01 | Release 2 assignment |
CG9893 | 2001-10-10 | Blastp of sequenced clone |
CG9893 | 2003-01-01 | Sim4 clustering to Release 3 |
l(2)06496 | 2008-04-29 | Release 5.5 accounting |
l(2)06496 | 2008-08-15 | Release 5.9 accounting |
l(2)06496 | 2008-12-18 | 5.12 accounting |
1171 bp (1171 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061216
> LD16285.complete GTTTTGCAGACTGACATCATTCCCATCAAAACGAACAAAATAAAGAGAAA TTCAGCGAAAAATGGAGGCACTGGACATTCTGGAGAAGCGCATCGATGCC CTGACACGAGTCCTGGGTCCGGTCCAGGACTCTGAGGTGGGCGAGGGCGT GGTCGACGCCCTGTGCTCGGCACACGCCATCCTGGGCGAAGCAACCACAG GAAGTGCTGCACTGCAGCAGTGCGTGAAGAGATCTGACGAGCTGGAGAAG TACCTGGACCCCAACTTCCTGGAGGAGCACCAGCAGGTGCGCTCCAAGGA GGTGTACCTGCAAGCCGTGGCCCCCGAGCTGCACACGCAGGCCGAGCAGC TGGAGAGGATTAAGCAGCTGGAACCGGCCCTGGGCGCGGAGTACTTCCGC AGCATTCCCGCCGAGTGTCTGGAGCAGCTAAAGGGCATAACGCAGAACAA CGGGGAGTACGCGCAGCAGAGCGAACTTATCGAGGAGAGTCTGGTCCTGG CCATGAAGCGATATGGCGAGATCCAGGCGGGACTGCTGAGCTCCCTGGAT GCCATGAGCGAGCGCTTGGACCAGGTAGAGGAGCGCATGGAGCAGAGGAA GCGTGCAGAGTTGAGCAAGGATGTGCCGCCCAAGGATTGAGCGGATATAG ATCCAAAGACTGCTGAAAGTATTTTATACGACCCCGTTTCCAAATCCGTT CACCTGAAAATCTGGTTCCACTTAAGCTGAAGGCATCAGTTGCTCAAGCA ATGGATGTAACCTAGGTTCTATTGAAAAGTGTAATCGTAGCTAAAGCCAT CCCGATTTGATTGGAACTGTTTAAGGAAGCCGGGATATTAGATTTTCTAA CTACTCCAACGTAAAGTGGCTAATGATGCTCTTTCAATTGTAAGTTTCAT TTTTAAAAACTATTTAACTAAGCACAATAAACTAAATTACAAATCTAATG AAAACCAATCAAAATCCTGTCTTACAGAAGGAAAATGCTATAATCACATA ATAGAGCACAATATGGATTTATCATTGGCTGAATTTTATTTTTATTATCT ATACAATGTATACAATACGATGTGACACTTATGTATGTAGGAATTGTAGA AGGAAATAGTTACAAAATAATAATTTACCCGCGGAAACGCTCTTTCAACA GTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(2)06496-RA | 1183 | l(2)06496-RA | 32..1183 | 1..1152 | 5760 | 100 | Plus |
l(2)06496.a | 1031 | l(2)06496.a | 32..768 | 1..737 | 3670 | 99.8 | Plus |
l(2)06496.a | 1031 | l(2)06496.a | 857..1031 | 978..1152 | 875 | 100 | Plus |
CG30194-RB | 2540 | CG30194-RB | 2406..2540 | 1155..1021 | 675 | 100 | Minus |
l(2)06496.a | 1031 | l(2)06496.a | 756..856 | 789..889 | 490 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 18947885..18949036 | 1152..1 | 5640 | 99.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 23061417..23062571 | 1155..1 | 5775 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 23062616..23063770 | 1155..1 | 5775 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 993..1062 | 899..967 | 130 | 70.4 | Plus |
Burdock | 6411 | Burdock DMU89994 6411bp Derived from U89994 (g1905850) (Rel. 51, Last updated, Version 1). | 465..580 | 1124..1019 | 124 | 62.1 | Minus |
Circe | 7450 | Circe CIRC 7450bp | 3069..3168 | 923..1023 | 115 | 59.8 | Plus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6604..6685 | 1060..978 | 114 | 64.3 | Minus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 1356..1458 | 1129..1030 | 111 | 59.2 | Minus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 9238..9340 | 1129..1030 | 111 | 59.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 18947885..18949036 | 1..1152 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)06496-RA | 1..579 | 62..640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)06496-RA | 1..579 | 62..640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)06496-RA | 1..579 | 62..640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)06496-RA | 1..579 | 62..640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)06496-RA | 1..579 | 62..640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)06496-RA | 32..1183 | 1..1152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)06496-RA | 32..1183 | 1..1152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)06496-RA | 23..1174 | 1..1152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)06496-RA | 32..1183 | 1..1152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)06496-RA | 23..1174 | 1..1152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23061420..23062571 | 1..1152 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23061420..23062571 | 1..1152 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23061420..23062571 | 1..1152 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 18948943..18950094 | 1..1152 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23062637..23063788 | 1..1152 | 100 | Minus |
Translation from 61 to 639
> LD16285.pep MEALDILEKRIDALTRVLGPVQDSEVGEGVVDALCSAHAILGEATTGSAA LQQCVKRSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERI KQLEPALGAEYFRSIPAECLEQLKGITQNNGEYAQQSELIEESLVLAMKR YGEIQAGLLSSLDAMSERLDQVEERMEQRKRAELSKDVPPKD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11306-PA | 192 | GF11306-PA | 1..192 | 1..192 | 882 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\l(2)06496-PA | 192 | GG20074-PA | 1..192 | 1..192 | 961 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20914-PA | 200 | GH20914-PA | 1..200 | 1..192 | 798 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
DCTN3-p24-PB | 192 | CG9893-PB | 1..192 | 1..192 | 954 | 100 | Plus |
DCTN3-p24-PA | 192 | CG9893-PA | 1..192 | 1..192 | 954 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18349-PA | 200 | GI18349-PA | 1..200 | 1..192 | 780 | 75.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10853-PA | 192 | GL10853-PA | 1..192 | 1..192 | 848 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22106-PA | 192 | GA22106-PA | 1..192 | 1..192 | 850 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15589-PA | 192 | GM15589-PA | 1..192 | 1..192 | 950 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25087-PA | 192 | GD25087-PA | 1..191 | 1..191 | 965 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20748-PA | 202 | GJ20748-PA | 1..202 | 1..192 | 801 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19603-PA | 196 | GK19603-PA | 1..196 | 1..192 | 795 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11612-PA | 192 | GE11612-PA | 1..192 | 1..192 | 958 | 96.9 | Plus |
Translation from 61 to 639
> LD16285.hyp MEALDILEKRIDALTRVLGPVQDSEVGEGVVDALCSAHAILGEATTGSAA LQQCVKRSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERI KQLEPALGAEYFRSIPAECLEQLKGITQNNGEYAQQSELIEESLVLAMKR YGEIQAGLLSSLDAMSERLDQVEERMEQRKRAELSKDVPPKD*