BDGP Sequence Production Resources |
Search the DGRC for LD16320
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 163 |
Well: | 20 |
Vector: | pBS SK- |
Associated Gene/Transcript | wcd-RA |
Protein status: | LD16320.pep: gold |
Preliminary Size: | 1651 |
Sequenced Size: | 1662 |
Gene | Date | Evidence |
---|---|---|
CG7989 | 2001-01-01 | Release 2 assignment |
CG7989 | 2002-06-06 | Blastp of sequenced clone |
CG7989 | 2003-01-01 | Sim4 clustering to Release 3 |
l(2)k07824 | 2008-04-29 | Release 5.5 accounting |
l(2)k07824 | 2008-08-15 | Release 5.9 accounting |
l(2)k07824 | 2008-12-18 | 5.12 accounting |
1662 bp (1662 high quality bases) assembled on 2002-06-06
GenBank Submission: AY119590
> LD16320.complete AGCTGCACGTGTATATTTTTTTGCGGTCCAAAGAAAAGTTCGTAAATAAA CGAATTTGCGTGCATTTCCAGCGAACACGATGAGTTCAGACGAGTCCAGC GACGGTTTGGAGGAGCTGCAGAGTCTGAAGGCCCTCTACGGCCAGCAGGA GCAAGAGAAACCGGCAAAGATCAAAAGGGAACGTTATATTCCAAAGGCCT CGCAGGCCAAGGAGCTCAACTATGTGGAGGTGCCCATGGAAAAGGTGCTC TTCGGCGACAGGCAGCGACTGCTCACCAATCTAGCCAAGTCCGTGGGACA AAAGTTGCCGAACGATGACGAAGACGAGCAGGAGGAAAATCCCGGCCAGG CAAAGCCAGGCGACAAGCGGAAAGCCGCCTGGTCGGATTCCGATGACGAG GACCTGCAGGTGGGCGATGTCAAGAAGGCCACAAAGCACACGGGTCCACT GAACCACCTGCGCAAGGATAAATCGTACAAGGAGTATCTTACGGCGCGAT TCCAGCGCACGCTTAACCAACCCAAGTGGGCGGAAAAGAAGGTCAAAAAT GAGGACGACGAGGACGTATCCTCCGACGAAGAACTGCTGCGGACGGTTGG CTTTATCGATCGTAAAGCCCGGAACAGTGATCTGCCCCAGAAGACTCTGA ATTTTAAACGGGTCAAAGACCTGAACAGGGCCACATATGCCGAGGGTAAT GCCACCAGCATTCAGTTTCATCCAACCAGTACTGCTGCTCTAGTGGCGGG CATGAATGGCCTAGCCACCATCTACGCCGTGGATGGGCAAAAGAACGAAA GGTTGCACAACATGCGCTTCAAGAAGTTCCCGCTGGCGTGCTCCAGAATT GCTCCATGCGGCACAAGGGCGTTCTTTGGTTCTGTGAAACCATTCTACTA CTCCTACGACTTGCTGGAAGCCAAGGAATCGAAGCTAAAGCTGCCGGGCG CAATGGAATTTATGCACCGCTTTGAGGTGTCTCCATGTGGCAAATTTATC GTCACTGCTGGCAAGTTTGGAGCCATTCACCTGCTCACGGCCAAAACAAA TGAGCTGCTGCACAGCTTCAAGCAGGAGGGCAAAGTGAAGGGATTCACAT GGTCTAGTGACTCCAAGAGGATCCTCGTCTGCGGTTCCACTTCCAATGTC AGCGTGCTGAACCTGCGCCAGAACCTCATCGAGCACATCTTCATGGACGA CGGCTGTATACATGGAGAGTCCATTCAACTGTCTCCCAACCAACGCCTAC TGGCCACCGGCAGTCAAGAGGGCGTGGTCAACATCTACGACTACGAGAGC ATTTTCGCATCCAAGGCCCCACAACCCGAGAAGCGCTTCATGAACCTACG GACTGCCATCACGGATCTCCAGTTCAATCACTCATCTGAGCTACTGGCGA TGTGCTCCAGTGAGGCGCCGAATGCTTTTAAGCTGGCCCATTTCCCCAGC GCCACTGTGTACTCCAATTTCCCGGCACAGAACGAGAAGGTTGGCTTTGT GACCTCCATGGCCTTTTCGCCGCACAGCAGCTTCCTGGCCTTTGCCACTA AGGGCAAACAGGTGCCGCTCTTTAGGCTTAAGTACTTCAAGGGTTATTAA TTGAAGGCAGTATGATGTTTACAATAAATTCTTAAATAAAAAAAAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(2)k07824-RA | 1661 | l(2)k07824-RA | 25..1661 | 1..1637 | 8185 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 12233138..12234774 | 1637..1 | 8065 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 16345834..16347474 | 1641..1 | 8205 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 16347033..16348673 | 1641..1 | 8205 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12233138..12234774 | 1..1637 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)k07824-RA | 1..1521 | 80..1600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wcd-RA | 1..1521 | 80..1600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wcd-RA | 1..1521 | 80..1600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)k07824-RA | 1..1521 | 80..1600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wcd-RA | 1..1521 | 80..1600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)k07824-RA | 25..1661 | 1..1637 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wcd-RA | 25..1661 | 1..1637 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wcd-RA | 27..1663 | 1..1637 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)k07824-RA | 25..1661 | 1..1637 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wcd-RA | 27..1663 | 1..1637 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16345838..16347474 | 1..1637 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16345838..16347474 | 1..1637 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16345838..16347474 | 1..1637 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12233343..12234979 | 1..1637 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16347037..16348673 | 1..1637 | 100 | Minus |
Translation from 79 to 1599
> LD16320.hyp MSSDESSDGLEELQSLKALYGQQEQEKPAKIKRERYIPKASQAKELNYVE VPMEKVLFGDRQRLLTNLAKSVGQKLPNDDEDEQEENPGQAKPGDKRKAA WSDSDDEDLQVGDVKKATKHTGPLNHLRKDKSYKEYLTARFQRTLNQPKW AEKKVKNEDDEDVSSDEELLRTVGFIDRKARNSDLPQKTLNFKRVKDLNR ATYAEGNATSIQFHPTSTAALVAGMNGLATIYAVDGQKNERLHNMRFKKF PLACSRIAPCGTRAFFGSVKPFYYSYDLLEAKESKLKLPGAMEFMHRFEV SPCGKFIVTAGKFGAIHLLTAKTNELLHSFKQEGKVKGFTWSSDSKRILV CGSTSNVSVLNLRQNLIEHIFMDDGCIHGESIQLSPNQRLLATGSQEGVV NIYDYESIFASKAPQPEKRFMNLRTAITDLQFNHSSELLAMCSSEAPNAF KLAHFPSATVYSNFPAQNEKVGFVTSMAFSPHSSFLAFATKGKQVPLFRL KYFKGY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wcd-PA | 506 | CG7989-PA | 1..506 | 1..506 | 2623 | 100 | Plus |
Translation from 79 to 1599
> LD16320.pep MSSDESSDGLEELQSLKALYGQQEQEKPAKIKRERYIPKASQAKELNYVE VPMEKVLFGDRQRLLTNLAKSVGQKLPNDDEDEQEENPGQAKPGDKRKAA WSDSDDEDLQVGDVKKATKHTGPLNHLRKDKSYKEYLTARFQRTLNQPKW AEKKVKNEDDEDVSSDEELLRTVGFIDRKARNSDLPQKTLNFKRVKDLNR ATYAEGNATSIQFHPTSTAALVAGMNGLATIYAVDGQKNERLHNMRFKKF PLACSRIAPCGTRAFFGSVKPFYYSYDLLEAKESKLKLPGAMEFMHRFEV SPCGKFIVTAGKFGAIHLLTAKTNELLHSFKQEGKVKGFTWSSDSKRILV CGSTSNVSVLNLRQNLIEHIFMDDGCIHGESIQLSPNQRLLATGSQEGVV NIYDYESIFASKAPQPEKRFMNLRTAITDLQFNHSSELLAMCSSEAPNAF KLAHFPSATVYSNFPAQNEKVGFVTSMAFSPHSSFLAFATKGKQVPLFRL KYFKGY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11267-PA | 505 | GF11267-PA | 1..505 | 1..506 | 2074 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22271-PA | 506 | GG22271-PA | 1..506 | 1..506 | 2540 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21920-PA | 514 | GH21920-PA | 1..514 | 1..506 | 1787 | 65.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wcd-PA | 506 | CG7989-PA | 1..506 | 1..506 | 2623 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19626-PA | 506 | GI19626-PA | 1..506 | 1..506 | 1738 | 62.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11347-PA | 501 | GL11347-PA | 1..501 | 1..506 | 1957 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20745-PA | 501 | GA20745-PA | 1..501 | 1..506 | 1965 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20061-PA | 506 | GM20061-PA | 1..506 | 1..506 | 2548 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25543-PA | 506 | GD25543-PA | 1..506 | 1..506 | 2556 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14994-PA | 508 | GJ14994-PA | 1..508 | 1..506 | 1768 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21606-PA | 494 | GK21606-PA | 35..494 | 47..506 | 1600 | 61.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14067-PA | 506 | GE14067-PA | 1..506 | 1..506 | 2469 | 88.9 | Plus |