BDGP Sequence Production Resources |
Search the DGRC for LD16326
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 163 |
Well: | 26 |
Vector: | pBS SK- |
Associated Gene/Transcript | RpL19-RA |
Protein status: | LD16326.pep: gold |
Preliminary Size: | 963 |
Sequenced Size: | 793 |
Gene | Date | Evidence |
---|---|---|
CG2746 | 2001-01-01 | Release 2 assignment |
CG2746 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2746 | 2003-01-15 | Blastp of sequenced clone |
RpL19 | 2008-04-29 | Release 5.5 accounting |
RpL19 | 2008-08-15 | Release 5.9 accounting |
RpL19 | 2008-12-18 | 5.12 accounting |
793 bp (793 high quality bases) assembled on 2003-01-15
GenBank Submission: AY061217
> LD16326.complete CTGACTTCCGGCTGTCAAATTTTTCTTTCTTTCCTAGCCACGACGAGGTC GACAGCATGAGTTCTCTAAAGCTCCAGAAGAGGCTCGCAGCCTCCGTGCT GCGATGCGGCAAGAAGAAGGTCTGGTTGGATCCCAATGAAATCAACGAGA TCGCTAACACAAACTCGCGTCAGAACATTCGCAAGCTTATCAAGGATGGT CTGATCATCAAGAAGCCCGTCGTGGTCCACTCCCGTTACCGTGTGCGCAA AAACACCGAGGCCCGCCGCAAGGGACGTCACTGCGGATTCGGAAAGCGTA AGGGTACTGCGAACGCCCGCATGCCTACCAAGCTGCTGTGGATGCAGCGC CAGCGCGTTCTGCGCCGCCTGTTGAAGAAGTACCGCGACAGCAAGAAGAT TGACAGGCACCTGTACCACGACCTGTACATGAAGTGCAAGGGTAACGTAT TCAAGAACAAGCGCGTCCTCATGGAGTACATCCACAAGAAGAAGGCTGAG AAGCAGCGCAGCAAGATGCTGGCTGATCAGGCCGAGGCTCGCCGACAGAA GGTGCGTGAGGCCCGCAAGCGCCGCGAGGAGCGTATTGCCACCAAGAAGC AGGAGCTCATCGCCCTGCATGCTAAGGAGGACGAGATCGCTGCCAAGGCC GCCACCGCGGGTCACTAAGCAGTCCGACCTCGCTAGTCGAGGAACTCCAT ATTGATAGTACTGTTTATCGTCTGAATAAAACACCTTTAGTTTGGCCGAA ATGATTTTGTACAAACGTGAAACTCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20854412..20855018 | 775..169 | 3020 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 20855083..20855193 | 170..60 | 555 | 100 | Minus |
chr2R | 21145070 | chr2R | 20855436..20855496 | 61..1 | 305 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24968444..24969051 | 776..169 | 3040 | 100 | Minus |
2R | 25286936 | 2R | 24969116..24969226 | 170..60 | 555 | 100 | Minus |
2R | 25286936 | 2R | 24969469..24969529 | 61..1 | 305 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24969643..24970250 | 776..169 | 3040 | 100 | Minus |
2R | 25260384 | 2R | 24970315..24970425 | 170..60 | 555 | 100 | Minus |
2R | 25260384 | 2R | 24970668..24970728 | 61..1 | 305 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20854412..20855018 | 169..775 | 99 | <- | Minus |
chr2R | 20855085..20855191 | 62..168 | 100 | <- | Minus |
chr2R | 20855436..20855496 | 1..61 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL19-RB | 1..612 | 57..668 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL19-RB | 1..612 | 57..668 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL19-RA | 1..612 | 57..668 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL19-RB | 1..612 | 57..668 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL19-RA | 1..612 | 57..668 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL19-RA | 19..793 | 1..775 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL19-RA | 19..793 | 1..775 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL19-RA | 19..793 | 1..775 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL19-RA | 19..793 | 1..775 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpL19-RA | 19..793 | 1..775 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24968445..24969051 | 169..775 | 100 | <- | Minus |
2R | 24969118..24969224 | 62..168 | 100 | <- | Minus |
2R | 24969469..24969529 | 1..61 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24968445..24969051 | 169..775 | 100 | <- | Minus |
2R | 24969118..24969224 | 62..168 | 100 | <- | Minus |
2R | 24969469..24969529 | 1..61 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24968445..24969051 | 169..775 | 100 | <- | Minus |
2R | 24969118..24969224 | 62..168 | 100 | <- | Minus |
2R | 24969469..24969529 | 1..61 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20855968..20856574 | 169..775 | 100 | <- | Minus |
arm_2R | 20856641..20856747 | 62..168 | 100 | <- | Minus |
arm_2R | 20856992..20857052 | 1..61 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24969662..24970268 | 169..775 | 100 | <- | Minus |
2R | 24970335..24970441 | 62..168 | 100 | <- | Minus |
2R | 24970686..24970746 | 1..61 | 100 | Minus |
Translation from 2 to 667
> LD16326.hyp DFRLSNFSFFPSHDEVDSMSSLKLQKRLAASVLRCGKKKVWLDPNEINEI ANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKGRHCGFGKRK GTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVF KNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQ ELIALHAKEDEIAAKAATAGH*
Translation from 56 to 667
> LD16326.pep MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLI IKKPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQR VLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQ RSKMLADQAEARRQKVREARKRREERIATKKQELIALHAKEDEIAAKAAT AGH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11517-PA | 203 | GF11517-PA | 1..203 | 1..203 | 1051 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19869-PA | 203 | GG19869-PA | 1..203 | 1..203 | 1051 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22044-PA | 204 | GH22044-PA | 1..204 | 1..203 | 1023 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpL19-PB | 203 | CG2746-PB | 1..203 | 1..203 | 1037 | 100 | Plus |
RpL19-PA | 203 | CG2746-PA | 1..203 | 1..203 | 1037 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19130-PA | 203 | GI19130-PA | 1..203 | 1..203 | 1051 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10890-PA | 203 | GL10890-PA | 1..203 | 1..203 | 1030 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15451-PA | 203 | GA15451-PA | 1..203 | 1..203 | 1030 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11772-PA | 203 | GM11772-PA | 1..203 | 1..203 | 1051 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24903-PA | 203 | GD24903-PA | 1..203 | 1..203 | 1051 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22263-PA | 203 | GJ22263-PA | 1..203 | 1..203 | 1051 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\RpL19-PA | 203 | GE11393-PA | 1..203 | 1..203 | 1048 | 99.5 | Plus |