BDGP Sequence Production Resources |
Search the DGRC for LD16414
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 164 |
Well: | 14 |
Vector: | pBS SK- |
Associated Gene/Transcript | slow-RA |
Protein status: | LD16414.pep: gold |
Preliminary Size: | 2449 |
Sequenced Size: | 2369 |
Gene | Date | Evidence |
---|---|---|
CG7447 | 2001-01-01 | Release 2 assignment |
CG7447 | 2001-10-10 | Blastp of sequenced clone |
CG7447 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7447 | 2008-04-29 | Release 5.5 accounting |
CG7447 | 2008-08-15 | Release 5.9 accounting |
CG7447 | 2008-12-18 | 5.12 accounting |
2369 bp (2369 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061220
> LD16414.complete GACTTCTAAGCGATCGGTTTGGATTTCGTTAGCTCCGCCGCGCCAGCTGG AAATTTGTATCTCAAAGATCGCAGCCAGTTCGCTCGGTTTTTGTGCCTGG CATACGGAAGCGGCTAACGCAGAATCCGGAAAATCACAAGAGCCGTATAT ATTTCACAAATATATATATATAGTATGTTTCGAAAAGGCCCATTCACGGC CATTAAAATATTTTATTGTACAAAAAAGGCACAGTGCCGCGTATCTGCTT AATGTCAGCGCGAAAACTCAATTCAATTTATTGTTTGTGATTGCAAATTT GGCATAATTGTGCTTTGATTTATTCGCGCGTGTTTCGGGTCATCTCTATA AAGAGGAATTTTAAATCTGGGCAAGATTATCTCTGTTTTTCTCTGAACAC TGGCTGGGTCAGTTGGAATTTGTTCGCCGTGTTGCCATCGAGTGAATTAA GGTAGCGGGACGCCAGCATCAAAATGCCAGAAATGATTTACTCGAGCTCT TTCCTGCTGCTCTGTTGCACAATCCTGCTGCTGGGAACAGTACAGAATGC CGGTTCCAATAGCACCAGCCCTCATCCTCACCAGAATCAAACTCATCGCG GACATGGTCACAGTCATCGAACGCGTCATCAGGGCAACTATTTGGCCACC CATCAAAGGCAGCAGCGCAGACTGCAGTCGCTGAATCAAGCCAAATCGGA TGTGGAGCTGCTGCCCGGGGTCACCATGCACGAGGTCACCAGATTACGAC GGGTTCAGCCACATAATCCCTACAATAAAGTGCAGACACGACGCCTACAC CAATCGCGAAACCCCACCGAATGGGATTACAATACTTACAACATCATGAC CAACACGTTCGGTCCACCGCCACCGCCGATGCCGTTGTCACCGCGATATG GAAAGGGCGAGGATAATACCCAGGATGTTGAGTTTATCGGGGTGCGAGAA CGTGGAAGGGGTTACTCATTCGTGCCATCGGTAACGGTCACCACTGCTCC GCCACCGAATCTGAATCGAAGATCCGCGAGTCCTGGTTCTCGCAGTAGCA TCGGCACTATTCCACCACTGGTTCCGGCCAGAAGGGGCTATAGCTACACC ACCACCACAAGTTCTCCTCCAGTGAACACCATCACCACTGACAATCCCTT CGAGACGAACACCATTGGTCGAGGCTATCCCACAGATCCCAAGGAAATGG AAAGGCGGCACATTTGCATGCAACAGCGAACGGTTACGATGCCCGTGAAG CGAACGGAGGTCTACAGTCGTCCCACCTGGAAGCACGTGGCCACGCCCTG CCAGCCGCCCACCTTTAGTGGCCAGAAGTGCACCAGGGTGCAGGTGGTCC ACGAGCAGGCCTACAGGGACGTCATCGATCACAAGACCGCCCAGCAGATG ACCTACGACTGCTGCACGGGATGGAGCCGGGAAAACCCAAGGTCGGATTC GTGCATGAAACCTATTTGCTCCGCGCGCTGCCAAAACGGTGGCAATTGTA CGGCTCCTAGCACCTGCAGCTGTCCAACTGGTTTCACAGGACGTTTCTGC GAGCAGGATGTGGACGAGTGCCAGACGGAGAAGCCATGCGATCAACAGTG CATCAATACGCATGGATCTTACTTCTGCCGCTGCCGTCAGGGATTCGTTC TCCAGTCGGATCAGCAGAGCTGCAAGAAGGTGTCCACGAATGCGGACGAT GCGTTCGAGGCTCGGGATCTGGAGAACGATATCGATGATACGGACGCGGA GGTGGCCACGCGACTCCAGAAGATCGAAAAGTCCTTGGCCAATGAGCGAG TGCACACGAACGAGCTGCAAAAGTCGCTGCAGGCCACCTACAGTGTGGTG GACACACTCAAGAGTCGGCTAAGCACGCTGGAAAAGCAGGCTCAGGATGT CAGTCGACTGCAGACGAATCTCTACAAGACAGAGTCCCGGACGAACAAGC TGGAGGGTATGCTGAACCTGCTGCTGAAGTGCCGGAATGGCCCCAATGCC AATTGCCCCTAAACAGAACTGCATTTCCCCACGCTATTATTAAATGTTAG TTAACTTAATTGACCACTCCGTTCATGTGTAGCTAGATGCTCCTGCTTGT AAGCCATTCCCGAATGCGAGTCGAGTGCCTCTGTAGTCTGTAGAATTAGC CCACGGATCGGGCTATTAGTACTTAAGCGAGAACGTGTGTCATAAATGTA TCGAGATGTGAAGTTTTAGACGTAAGCGCACCACCGCACTCTGCACCGCT CTTCATGTGGGTGGTGCAGTGATTAGTTTCTGCATGTATCTGTATATAAT TTTAATGTATATGAGAAATCACTGCACGAATAAATGCATTTTCTGATTTT AAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7447-RA | 2390 | CG7447-RA | 36..2387 | 1..2352 | 11760 | 100 | Plus |
CG7447-RB | 2233 | CG7447-RB | 311..2230 | 433..2352 | 9600 | 100 | Plus |
CG7447.a | 2081 | CG7447.a | 159..2078 | 433..2352 | 9600 | 100 | Plus |
CG7447-RB | 2233 | CG7447-RB | 139..310 | 1..172 | 860 | 100 | Plus |
CG7447.a | 2081 | CG7447.a | 15..158 | 1..144 | 720 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 4389849..4390624 | 433..1205 | 3450 | 96.6 | Plus |
chr3L | 24539361 | chr3L | 4402140..4402610 | 1880..2350 | 2355 | 100 | Plus |
chr3L | 24539361 | chr3L | 4383847..4384278 | 1..432 | 2130 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 4401654..4402073 | 1462..1881 | 2070 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 4401327..4401585 | 1203..1461 | 1295 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 4390450..4391222 | 433..1205 | 3865 | 100 | Plus |
3L | 28110227 | 3L | 4402711..4403183 | 1880..2352 | 2365 | 100 | Plus |
3L | 28110227 | 3L | 4384456..4384887 | 1..432 | 2160 | 100 | Plus |
3L | 28110227 | 3L | 4402225..4402644 | 1462..1881 | 2100 | 100 | Plus |
3L | 28110227 | 3L | 4401898..4402156 | 1203..1461 | 1295 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 4390450..4391222 | 433..1205 | 3865 | 100 | Plus |
3L | 28103327 | 3L | 4402711..4403183 | 1880..2352 | 2365 | 100 | Plus |
3L | 28103327 | 3L | 4384456..4384887 | 1..432 | 2160 | 100 | Plus |
3L | 28103327 | 3L | 4402225..4402644 | 1462..1881 | 2100 | 100 | Plus |
3L | 28103327 | 3L | 4401898..4402156 | 1203..1461 | 1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 4401329..4401585 | 1205..1461 | 100 | -> | Plus |
chr3L | 4383847..4384278 | 1..432 | 99 | -> | Plus |
chr3L | 4389849..4390623 | 433..1204 | 96 | -> | Plus |
chr3L | 4401654..4402072 | 1462..1880 | 99 | -> | Plus |
chr3L | 4402141..4402610 | 1881..2350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7447-RB | 1..1539 | 474..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slow-RB | 1..1539 | 474..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slow-RA | 1..1539 | 474..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7447-RB | 1..1539 | 474..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slow-RA | 1..1539 | 474..2012 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7447-RA | 2..2351 | 1..2350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slow-RA | 2..2351 | 1..2350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slow-RA | 15..2364 | 1..2350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7447-RA | 2..2351 | 1..2350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slow-RA | 15..2364 | 1..2350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4384456..4384887 | 1..432 | 100 | -> | Plus |
3L | 4390450..4391221 | 433..1204 | 100 | -> | Plus |
3L | 4401900..4402156 | 1205..1461 | 100 | -> | Plus |
3L | 4402225..4402643 | 1462..1880 | 100 | -> | Plus |
3L | 4402712..4403181 | 1881..2350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4384456..4384887 | 1..432 | 100 | -> | Plus |
3L | 4390450..4391221 | 433..1204 | 100 | -> | Plus |
3L | 4401900..4402156 | 1205..1461 | 100 | -> | Plus |
3L | 4402225..4402643 | 1462..1880 | 100 | -> | Plus |
3L | 4402712..4403181 | 1881..2350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4384456..4384887 | 1..432 | 100 | -> | Plus |
3L | 4390450..4391221 | 433..1204 | 100 | -> | Plus |
3L | 4401900..4402156 | 1205..1461 | 100 | -> | Plus |
3L | 4402225..4402643 | 1462..1880 | 100 | -> | Plus |
3L | 4402712..4403181 | 1881..2350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 4384456..4384887 | 1..432 | 100 | -> | Plus |
arm_3L | 4390450..4391221 | 433..1204 | 100 | -> | Plus |
arm_3L | 4401900..4402156 | 1205..1461 | 100 | -> | Plus |
arm_3L | 4402225..4402643 | 1462..1880 | 100 | -> | Plus |
arm_3L | 4402712..4403181 | 1881..2350 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4402712..4403181 | 1881..2350 | 100 | Plus | |
3L | 4384456..4384887 | 1..432 | 100 | -> | Plus |
3L | 4390450..4391221 | 433..1204 | 100 | -> | Plus |
3L | 4401900..4402156 | 1205..1461 | 100 | -> | Plus |
3L | 4402225..4402643 | 1462..1880 | 100 | -> | Plus |
Translation from 473 to 2011
> LD16414.pep MPEMIYSSSFLLLCCTILLLGTVQNAGSNSTSPHPHQNQTHRGHGHSHRT RHQGNYLATHQRQQRRLQSLNQAKSDVELLPGVTMHEVTRLRRVQPHNPY NKVQTRRLHQSRNPTEWDYNTYNIMTNTFGPPPPPMPLSPRYGKGEDNTQ DVEFIGVRERGRGYSFVPSVTVTTAPPPNLNRRSASPGSRSSIGTIPPLV PARRGYSYTTTTSSPPVNTITTDNPFETNTIGRGYPTDPKEMERRHICMQ QRTVTMPVKRTEVYSRPTWKHVATPCQPPTFSGQKCTRVQVVHEQAYRDV IDHKTAQQMTYDCCTGWSRENPRSDSCMKPICSARCQNGGNCTAPSTCSC PTGFTGRFCEQDVDECQTEKPCDQQCINTHGSYFCRCRQGFVLQSDQQSC KKVSTNADDAFEARDLENDIDDTDAEVATRLQKIEKSLANERVHTNELQK SLQATYSVVDTLKSRLSTLEKQAQDVSRLQTNLYKTESRTNKLEGMLNLL LKCRNGPNANCP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25068-PA | 513 | GF25068-PA | 1..513 | 1..512 | 2159 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15224-PA | 517 | GG15224-PA | 1..517 | 1..512 | 2340 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15678-PA | 506 | GH15678-PA | 44..506 | 60..512 | 1735 | 74.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
slow-PB | 512 | CG7447-PB | 1..512 | 1..512 | 2784 | 100 | Plus |
slow-PA | 512 | CG7447-PA | 1..512 | 1..512 | 2784 | 100 | Plus |
N-PB | 2703 | CG3936-PB | 157..247 | 304..391 | 191 | 42.7 | Plus |
N-PA | 2703 | CG3936-PA | 157..247 | 304..391 | 191 | 42.7 | Plus |
N-PB | 2703 | CG3936-PB | 812..987 | 273..422 | 180 | 29 | Plus |
N-PA | 2703 | CG3936-PA | 812..987 | 273..422 | 180 | 29 | Plus |
N-PB | 2703 | CG3936-PB | 258..380 | 275..404 | 175 | 34.8 | Plus |
N-PA | 2703 | CG3936-PA | 258..380 | 275..404 | 175 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12723-PA | 497 | GI12723-PA | 25..497 | 37..512 | 1712 | 72 | Plus |
Dmoj\GI21507-PA | 1968 | GI21507-PA | 1354..1467 | 311..416 | 154 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17893-PA | 370 | GL17893-PA | 53..370 | 199..512 | 1295 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20359-PA | 531 | GA20359-PA | 9..531 | 8..512 | 2036 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14656-PA | 513 | GM14656-PA | 1..513 | 4..512 | 2682 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13841-PA | 516 | GD13841-PA | 1..516 | 1..512 | 2713 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12711-PA | 504 | GJ12711-PA | 31..504 | 59..512 | 1680 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11704-PA | 520 | GK11704-PA | 75..520 | 73..512 | 1737 | 76.8 | Plus |
Dwil\GK17279-PA | 2690 | GK17279-PA | 99..271 | 276..422 | 156 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21444-PA | 519 | GE21444-PA | 1..519 | 1..512 | 2408 | 92.3 | Plus |
Translation from 473 to 2011
> LD16414.hyp MPEMIYSSSFLLLCCTILLLGTVQNAGSNSTSPHPHQNQTHRGHGHSHRT RHQGNYLATHQRQQRRLQSLNQAKSDVELLPGVTMHEVTRLRRVQPHNPY NKVQTRRLHQSRNPTEWDYNTYNIMTNTFGPPPPPMPLSPRYGKGEDNTQ DVEFIGVRERGRGYSFVPSVTVTTAPPPNLNRRSASPGSRSSIGTIPPLV PARRGYSYTTTTSSPPVNTITTDNPFETNTIGRGYPTDPKEMERRHICMQ QRTVTMPVKRTEVYSRPTWKHVATPCQPPTFSGQKCTRVQVVHEQAYRDV IDHKTAQQMTYDCCTGWSRENPRSDSCMKPICSARCQNGGNCTAPSTCSC PTGFTGRFCEQDVDECQTEKPCDQQCINTHGSYFCRCRQGFVLQSDQQSC KKVSTNADDAFEARDLENDIDDTDAEVATRLQKIEKSLANERVHTNELQK SLQATYSVVDTLKSRLSTLEKQAQDVSRLQTNLYKTESRTNKLEGMLNLL LKCRNGPNANCP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
slow-PB | 512 | CG7447-PB | 1..512 | 1..512 | 2784 | 100 | Plus |
slow-PA | 512 | CG7447-PA | 1..512 | 1..512 | 2784 | 100 | Plus |
N-PB | 2703 | CG3936-PB | 157..247 | 304..391 | 191 | 42.7 | Plus |
N-PA | 2703 | CG3936-PA | 157..247 | 304..391 | 191 | 42.7 | Plus |
N-PB | 2703 | CG3936-PB | 812..987 | 273..422 | 180 | 29 | Plus |
N-PA | 2703 | CG3936-PA | 812..987 | 273..422 | 180 | 29 | Plus |
N-PB | 2703 | CG3936-PB | 258..380 | 275..404 | 175 | 34.8 | Plus |
N-PA | 2703 | CG3936-PA | 258..380 | 275..404 | 175 | 34.8 | Plus |