BDGP Sequence Production Resources |
Search the DGRC for LD16419
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 164 |
Well: | 19 |
Vector: | pBS SK- |
Associated Gene/Transcript | RhoGDI-RA |
Protein status: | LD16419.pep: gold |
Preliminary Size: | 1631 |
Sequenced Size: | 1494 |
Gene | Date | Evidence |
---|---|---|
CG7823 | 2001-01-01 | Release 2 assignment |
CG7823 | 2001-10-10 | Blastp of sequenced clone |
CG7823 | 2003-01-01 | Sim4 clustering to Release 3 |
RhoGDI | 2008-04-29 | Release 5.5 accounting |
RhoGDI | 2008-08-15 | Release 5.9 accounting |
RhoGDI | 2008-12-18 | 5.12 accounting |
1494 bp (1494 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061221
> LD16419.complete AAAAGTTAGTTATCAAAAGTTGTTAAAAATATAACATACAGTTACTTTTC AGTGATTAATTTTCAGAGATCGTACTATTTGATTAATTTCGCATATTAAA AGTTCTAGGTTAGCAATCATGGCCGAAACAGAGACGAAGCACCATCCCGA GCACCACGACGACGATGTCCACGATGCCAACTACCAGGCGCCGCCGGAGA AGACCATCGAGGAAATAATGGCCGCCGATCAGGAGGATGAGAGCTTGCGG CGCTACAAGGAGGCGCTCCTGGGTGCCGCCCAGACCGAGAAAATTATTGT TGAACCCAATGATCCCCGAAAAGTTATTGTAAAGAAACTGGCCCTCGTTG TCGAAGGACGCGACGACATGGAATTGGATCTTACCGGTGACCTTAGTCAG CTGAAAAAGCAGCTTTTTGTGATCAAAGAAGGTGTTCAGTACAAGGTGCG CATTGATTTTATTGTGCAGCGTGAAATAGTCCATGGCCTTAAGTATGTTC AAAAGACTTCTCGCTTGGGTGTTAATGTTGACAAGATGAAGCATATGGTT GGCTCCTATCCGCCGAAGAAGGAGATTCAGTTCTATTTGACGCCCGCCGA GGAGGCACCTTCAGGCACATTCTCCCGCGGCACCTACTCGGTCAGTTCGG TCTTCACGGATGACGACAAGCACATACACCTGGAGTGGGACTGGACCTTT GAGATCAAAAAGGACTGGGCCTAATTGGCACACCGAACAGCACACAACAA ACACACACGACACACAACTTACAACATACATCATACGCTTTTTGTTTTCC CTCAAACATGCCTTGTAAATGAGTTTAGTTTTGTTCCAAAAGTGTAAGCG AATTTTTCCAAAAGTGTAATTGATCGTCAAGTATTTTTGTTAACGGTATT AAATTTTAAATATTTTTGTAACTAAAGTGTAATGTAAAGCCATGATAAGT ATTTTTGATACCCTATTTGCAATTGGAATGTGTGCAGATGAAGAGCATTT TTCGCCTAAGTCCTCCTCAATGAGAGTCAAGTCAAAACCAAGTCAAGTCA CTAGGCCAGTCAGTCAGTCAGTCAGCCAACCAGTCAGTCAGACAGTCAGT CGTTTGGTTCTTAATGCCATTGCCTATGTTTAACATACATTTTCAAACAG ATTAACAATTGAGTAATTAACTTTAAGAAAGTTGTTTGCATTTCGCTGTG TATTTCAAATTGAAGAATGGAATAGTTTATTGTAAGAACAAGTCGCCTCA AAACTAAAAAGAAACCGATTAAAATCGTGCAACACGAACTGTTAAATGCA ACTAAAGCTGATGCTTTATTATGCATTTGAAGTTTGTGCAACATGGAGTT ACTTAAATCCACATTATTCTAACTATATATCTCTGTGTATTTTTTGTGTA CAACATACCATATATGCGAAAGCTGATTGAATGCAACCGAAGAGCAATAA AGAATAAAGGATACATATTTTAAAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RhoGDI-RA | 1574 | RhoGDI-RA | 69..1547 | 1..1479 | 7395 | 100 | Plus |
RhoGDI.a | 1568 | RhoGDI.a | 69..1541 | 1..1479 | 7280 | 99.5 | Plus |
RhoGDI.d | 1614 | RhoGDI.d | 211..1587 | 103..1479 | 6885 | 100 | Plus |
RhoGDI.d | 1614 | RhoGDI.d | 69..170 | 1..102 | 510 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 19921315..19922264 | 527..1476 | 4705 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 19920147..19920348 | 101..302 | 1010 | 100 | Plus |
chr3L | 24539361 | chr3L | 19920594..19920715 | 410..531 | 595 | 99.2 | Plus |
chr3L | 24539361 | chr3L | 19920421..19920531 | 302..412 | 555 | 100 | Plus |
chr3L | 24539361 | chr3L | 19918137..19918238 | 1..102 | 510 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 19931981..19932933 | 527..1479 | 4765 | 100 | Plus |
3L | 28110227 | 3L | 19930813..19931014 | 101..302 | 1010 | 100 | Plus |
3L | 28110227 | 3L | 19931260..19931381 | 410..531 | 595 | 99.2 | Plus |
3L | 28110227 | 3L | 19931087..19931197 | 302..412 | 555 | 100 | Plus |
3L | 28110227 | 3L | 19928807..19928908 | 1..102 | 510 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 19925081..19926033 | 527..1479 | 4765 | 100 | Plus |
3L | 28103327 | 3L | 19923913..19924114 | 101..302 | 1010 | 100 | Plus |
3L | 28103327 | 3L | 19924360..19924481 | 410..531 | 595 | 99.1 | Plus |
3L | 28103327 | 3L | 19924187..19924297 | 302..412 | 555 | 100 | Plus |
3L | 28103327 | 3L | 19921907..19922008 | 1..102 | 510 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19918137..19918238 | 1..102 | 100 | -> | Plus |
chr3L | 19920149..19920348 | 103..302 | 100 | -> | Plus |
chr3L | 19920422..19920531 | 303..412 | 100 | -> | Plus |
chr3L | 19920597..19920711 | 413..527 | 100 | -> | Plus |
chr3L | 19921316..19922264 | 528..1476 | 92 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RhoGDI-RA | 1..606 | 119..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RhoGDI-RA | 1..606 | 119..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RhoGDI-RA | 1..606 | 119..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RhoGDI-RA | 1..606 | 119..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RhoGDI-RA | 1..606 | 119..724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RhoGDI-RA | 1..1476 | 1..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RhoGDI-RA | 1..1476 | 1..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RhoGDI-RA | 65..1540 | 1..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RhoGDI-RA | 1..1476 | 1..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RhoGDI-RA | 65..1540 | 1..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19931088..19931197 | 303..412 | 100 | -> | Plus |
3L | 19931263..19931377 | 413..527 | 100 | -> | Plus |
3L | 19928807..19928908 | 1..102 | 100 | -> | Plus |
3L | 19930815..19931014 | 103..302 | 100 | -> | Plus |
3L | 19931982..19932930 | 528..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19931088..19931197 | 303..412 | 100 | -> | Plus |
3L | 19931263..19931377 | 413..527 | 100 | -> | Plus |
3L | 19928807..19928908 | 1..102 | 100 | -> | Plus |
3L | 19930815..19931014 | 103..302 | 100 | -> | Plus |
3L | 19931982..19932930 | 528..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19931088..19931197 | 303..412 | 100 | -> | Plus |
3L | 19931263..19931377 | 413..527 | 100 | -> | Plus |
3L | 19928807..19928908 | 1..102 | 100 | -> | Plus |
3L | 19930815..19931014 | 103..302 | 100 | -> | Plus |
3L | 19931982..19932930 | 528..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19924188..19924297 | 303..412 | 100 | -> | Plus |
arm_3L | 19924363..19924477 | 413..527 | 100 | -> | Plus |
arm_3L | 19921907..19922008 | 1..102 | 100 | -> | Plus |
arm_3L | 19923915..19924114 | 103..302 | 100 | -> | Plus |
arm_3L | 19925082..19926030 | 528..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19925082..19926030 | 528..1476 | 100 | Plus | |
3L | 19921907..19922008 | 1..102 | 100 | -> | Plus |
3L | 19923915..19924114 | 103..302 | 100 | -> | Plus |
3L | 19924188..19924297 | 303..412 | 100 | -> | Plus |
3L | 19924363..19924477 | 413..527 | 100 | -> | Plus |
Translation from 118 to 723
> LD16419.pep MAETETKHHPEHHDDDVHDANYQAPPEKTIEEIMAADQEDESLRRYKEAL LGAAQTEKIIVEPNDPRKVIVKKLALVVEGRDDMELDLTGDLSQLKKQLF VIKEGVQYKVRIDFIVQREIVHGLKYVQKTSRLGVNVDKMKHMVGSYPPK KEIQFYLTPAEEAPSGTFSRGTYSVSSVFTDDDKHIHLEWDWTFEIKKDW A*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23606-PA | 201 | GF23606-PA | 1..200 | 1..200 | 1028 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16070-PA | 201 | GG16070-PA | 1..201 | 1..201 | 1034 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17059-PA | 201 | GH17059-PA | 1..201 | 1..201 | 961 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RhoGDI-PB | 201 | CG7823-PB | 1..201 | 1..201 | 1054 | 100 | Plus |
RhoGDI-PA | 201 | CG7823-PA | 1..201 | 1..201 | 1054 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11654-PA | 201 | GI11654-PA | 1..201 | 1..201 | 958 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22671-PA | 202 | GL22671-PA | 1..202 | 1..201 | 997 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20609-PA | 202 | GA20609-PA | 1..202 | 1..201 | 991 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19691-PA | 201 | GM19691-PA | 1..201 | 1..201 | 1051 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14840-PA | 201 | GD14840-PA | 1..201 | 1..201 | 1059 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11334-PA | 201 | GJ11334-PA | 1..201 | 1..201 | 953 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16712-PA | 203 | GK16712-PA | 22..202 | 20..200 | 879 | 91.7 | Plus |
Translation from 118 to 723
> LD16419.hyp MAETETKHHPEHHDDDVHDANYQAPPEKTIEEIMAADQEDESLRRYKEAL LGAAQTEKIIVEPNDPRKVIVKKLALVVEGRDDMELDLTGDLSQLKKQLF VIKEGVQYKVRIDFIVQREIVHGLKYVQKTSRLGVNVDKMKHMVGSYPPK KEIQFYLTPAEEAPSGTFSRGTYSVSSVFTDDDKHIHLEWDWTFEIKKDW A*