BDGP Sequence Production Resources |
Search the DGRC for LD16427
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 164 |
Well: | 27 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG11760-RA |
Protein status: | LD16427.pep: validated full length |
Preliminary Size: | 1873 |
Sequenced Size: | 1698 |
Gene | Date | Evidence |
---|---|---|
CG11760 | 2001-01-01 | Release 2 assignment |
CG11760 | 2002-06-06 | Blastp of sequenced clone |
CG11760 | 2008-04-29 | Release 5.5 accounting |
CG11760 | 2008-08-15 | Release 5.9 accounting |
CG11760 | 2008-12-18 | 5.12 accounting |
1698 bp (1698 high quality bases) assembled on 2002-06-06
GenBank Submission: AY119591
> LD16427.complete CTCAAAACTAAGCCACTTAAATGCACACTAAGCCACCGCACATAAAAACA AAACAAAAAATCTAGATCCTACTAGACCTCCTAGGAATCCGTGCCAAGAC AACCCGATAACATACCCAATGGCTGGCAGTTGAGGAGGACTTTCAACAAG GCTGGTCGGCCATACTGTCGGTCTTCATGACCGCCCCCTGCTTTGTGGGC GTCTCCTATCTACTGCTGCTCCAGACCTACCGACTGCGCCTGGAGTACTG CCTGTGCACGCTGCAGATCGCCCTTTACCTGACCGAGGTGTGGTATGCCA TCGTCTTCGTTTTCTCGCTGTGTCGTCCAGTAACTTATGATTAGCCATAT AGACAGAAACATCCAACAGCCAACTAGCAGCAAATATACATGCGAAAGTT TAGCAATCTATAAGATCGAAAAAGGATAATATGCGGTGTAAGGAAATTTA ATGAATTTGAAAAGCAGTAGGCAGCTGAATTGCTCATGGCCGTGGAGAAG AGAAACCAAACAGAAAGAAAAAAAAAACAAAACAAAACACATATGTAGCA TATTAATAATTATGTATAGTAAGGTTTATGATAACATACACACACTCTTA TATACATATATTTAACGGTTTTATATACAAAAATTGTTAACATTTAAGCA TCAATTGGAACCAATATAAGACAACAAGCAAAACCTAAAACTTGAATAAT TTTCACAATTTTAAGATGAAAATTTTTTTGTAAAAAGAAAAATATCGAAA AACAGCCGAAAAACAAATTTGATGTGTGGAAATAATAATTTATAATAGTT CACAGATAGCTCGAATCTTAAAAAGAATTGTAAAAAAATCAGTGGAATGT CTCACAAAATCTAGTCAGCATCAAAATCATGAAAAACAAATGGCCGAAAG GCCATTAAAAAAATTCATTACCACTAAGAGTCAGCGTTTAGTAGTTCATA CCAATATTCAAAAGGCGGAGAACAACATAATTAAGCCCAGTTAAAAGTCT AGACCATGTGTGTACTTTAATGAAACTACTTTATATAAACCTAGCAAATA GCGTAAATAACATTTTCAAGACGTCACTAAAAACAATGCAAACCCGAGCG GGCAACCGTTTACTAGAAAGCGAACAACAAATTAGCTAAATCATATAAAA CATTTATAGAGTGTTAAAAACTAGGCGAAAACCCTCCATTACACTTCTCC CCAATTCAGCCTATTGGCAACTCGAAACGCCCTTTAAATCACGCTCAATT ATCCCCGCCTGATAGGATCCGAGGATTGCAGCTCCTCCAATGCTAGTCAC TAATGTTCACAAACATTTTCTAAGCTAGACCGAAGATTGTGTAATAATTT GATAAGACCTTTGTGTGGTTTCATAGCAAAATAACGCACAAATCGATAAC AAAAACTCTCAACAGTCCACAAATCTCATGCTTTTAAAACAAAAGAAATA ATTTTACTGAAACCAAACAGCTGGAAGCTAGAAGCTGAAAGAAAACCAAA GCCACATCCTACGTTGAATAATTTACCTGTATAATATTTATGTCATTTCG TTAAACGCAAAATGTTAACATACTTTTAAAGCGCGTGTAAAACGGATAGT TAATAAAATAACGACAACAATATTTAAAAGAACATATACACTCGATGAAA ATGAATATTAAAGATCGAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\Kepler | 722 | Dbuz\Kepler KEPLER 722bp | 411..460 | 586..634 | 112 | 72 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4544192..4544341 | 1..150 | 100 | -> | Plus |
chr3R | 4545776..4547299 | 151..1675 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11760-RB | 255..450 | 149..344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11760-RB | 255..450 | 149..344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11760-RB | 255..450 | 149..344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11760-RB | 255..450 | 149..344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11760-RB | 255..450 | 149..344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11760-RA | 1..1675 | 1..1675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8116-RB | 1155..2829 | 1..1675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8116-RB | 1146..2812 | 1..1667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11760-RA | 1..1675 | 1..1675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8116-RB | 1146..2812 | 1..1667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8718222..8718371 | 1..150 | 100 | -> | Plus |
3R | 8719804..8721328 | 151..1675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8718222..8718371 | 1..150 | 100 | -> | Plus |
3R | 8719804..8721328 | 151..1675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8718222..8718371 | 1..150 | 100 | -> | Plus |
3R | 8719804..8721328 | 151..1675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4543944..4544093 | 1..150 | 100 | -> | Plus |
arm_3R | 4545526..4547050 | 151..1675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8460635..8462159 | 151..1675 | 100 | Plus | |
3R | 8459053..8459202 | 1..150 | 100 | -> | Plus |
Translation from 176 to 343
> LD16427.pep MTAPCFVGVSYLLLLQTYRLRLEYCLCTLQIALYLTEVWYAIVFVFSLCR PVTYD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18183-PA | 149 | GF18183-PA | 95..149 | 1..55 | 274 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12372-PA | 149 | GG12372-PA | 95..149 | 1..55 | 280 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18573-PA | 149 | GH18573-PA | 95..149 | 1..55 | 260 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11760-PB | 149 | CG11760-PB | 95..149 | 1..55 | 294 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22391-PA | 149 | GI22391-PA | 95..149 | 1..55 | 270 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12473-PA | 149 | GL12473-PA | 95..149 | 1..55 | 274 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27519-PA | 149 | GA27519-PA | 95..149 | 1..55 | 274 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23755-PA | 149 | GM23755-PA | 95..149 | 1..55 | 280 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18566-PA | 149 | GD18566-PA | 95..149 | 1..55 | 280 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22676-PA | 149 | GJ22676-PA | 95..149 | 1..55 | 273 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11811-PA | 149 | GK11811-PA | 95..149 | 1..55 | 273 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25898-PA | 149 | GE25898-PA | 95..149 | 1..55 | 280 | 100 | Plus |
Translation from 176 to 343
> LD16427.hyp MTAPCFVGVSYLLLLQTYRLRLEYCLCTLQIALYLTEVWYAIVFVFSLCR PVTYD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11760-PB | 149 | CG11760-PB | 95..149 | 1..55 | 294 | 100 | Plus |