BDGP Sequence Production Resources |
Search the DGRC for LD16456
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 164 |
Well: | 56 |
Vector: | pBS SK- |
Associated Gene/Transcript | Nlp-RA |
Protein status: | LD16456.pep: gold |
Preliminary Size: | 1272 |
Sequenced Size: | 1098 |
Gene | Date | Evidence |
---|---|---|
CG7917 | 2001-01-01 | Release 2 assignment |
CG7917 | 2002-06-06 | Blastp of sequenced clone |
CG7917 | 2003-01-01 | Sim4 clustering to Release 3 |
Nlp | 2008-04-29 | Release 5.5 accounting |
Nlp | 2008-08-15 | Release 5.9 accounting |
Nlp | 2008-12-18 | 5.12 accounting |
1098 bp (1098 high quality bases) assembled on 2002-06-06
GenBank Submission: AY119592
> LD16456.complete AAGACTTGAAATATTTTTTAATATATTTTACTGTCGCGTTAGCTTGCAAC AAACGAATATAGATTGTCACATTCGATTGGACACTACAAGTGGCAGCCCT GCGATTTTGATTCCCAGTCTGACAATCATCGATTTCGGCACCTTACGTCG GCCTGGCAACCCTGCGACAGCTACCATTTTGCAAAAGATTTTGCTCAACA CGTGTTCGCCGCTGGTTTTGTGTGGAATTAATATTAAATATTACCTACCA TGGCTGAGGAATCATTCTACGGAGTCACTTTGACCGCCGAGAGCGACAGC GTCACGTGGGATGTGGACGAGGACTACGCACGCGGCCAGAAGCTGGTCAT CAAACAGATCCTCTTGGGCGCCGAGGCCAAGGAGAACGAGTTCAACGTGG TCGAGGTGAACACACCCAAGGACTCCGTGCAAATTCCCATCGCCGTATTG AAGGCCGGAGAGACCCGCGCCGTCAATCCCGACGTGGAGTTCTACGAGTC GAAGGTGACATTCAAGCTGATCAAGGGCAGCGGACCCGTCTACATCCACG GGCACAACATCAAGGACGATGTGGAGGTGGTCGACATGGAGGAGGATGAC GAGGAGGATGATGTCGCCGAGGACGAGGAGGACGAGCACCCAAAGAAGCG CGCCAAGATCGAGAACGCCGCCGATGGTAAAAATGCCAAGAACAACAAGA AGAAGTAAACTGCTGACCGCCAATCATCCATCGAGGTTTAAGCTATGAAC GTGTAGATTTTAAAGCAAAAACAGTTTTAGGCCCTATAATACAATACGAT GCATACTGAGAATACAATCTAGTTCCTTTTGAACAGCTCCTTTTACATTC AATTCAAAGACAACGTTGTGTGCTCGGTCGTGTTTCCCCAGCGAATGGTC TGTCGCTCAGCCAGGAGTTCCGCACCCGGAAGCGGGAGCGGATCGGACTG TGACTGATCCGGACACTAATCGAACACACAGATTTGTATATATATTAAAG TATAACTAAAGCTAAGCCGGACTTCCTGTACGCGCCCCTTCATATTTGCA GTATGAAAATAAACTTGTCGGAATACAAACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 25832066..25832742 | 404..1080 | 3340 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 25827163..25827434 | 1..272 | 1360 | 100 | Plus |
chr3R | 27901430 | chr3R | 25827669..25827807 | 271..409 | 695 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 30009676..30010354 | 404..1082 | 3395 | 100 | Plus |
3R | 32079331 | 3R | 30004785..30005056 | 1..272 | 1360 | 100 | Plus |
3R | 32079331 | 3R | 30005287..30005425 | 271..409 | 695 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 29750507..29751185 | 404..1082 | 3395 | 100 | Plus |
3R | 31820162 | 3R | 29745616..29745887 | 1..272 | 1360 | 100 | Plus |
3R | 31820162 | 3R | 29746118..29746256 | 271..409 | 695 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 25827196..25827433 | 34..271 | 100 | -> | Plus |
chr3R | 25827670..25827803 | 272..405 | 100 | -> | Plus |
chr3R | 25832068..25832224 | 406..562 | 99 | == | Plus |
chr3R | 25832299..25832742 | 637..1080 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nlp-RA | 1..459 | 250..708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nlp-RA | 1..459 | 250..708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nlp-RA | 1..459 | 250..708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nlp-RA | 1..459 | 250..708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nlp-RA | 1..459 | 250..708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nlp-RA | 1..1080 | 1..1080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nlp-RA | 1..1080 | 1..1080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nlp-RA | 1..1080 | 1..1080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nlp-RA | 1..1080 | 1..1080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nlp-RA | 1..1080 | 1..1080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30004785..30005055 | 1..271 | 100 | -> | Plus |
3R | 30005288..30005421 | 272..405 | 100 | -> | Plus |
3R | 30009678..30010352 | 406..1080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30004785..30005055 | 1..271 | 100 | -> | Plus |
3R | 30005288..30005421 | 272..405 | 100 | -> | Plus |
3R | 30009678..30010352 | 406..1080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30004785..30005055 | 1..271 | 100 | -> | Plus |
3R | 30005288..30005421 | 272..405 | 100 | -> | Plus |
3R | 30009678..30010352 | 406..1080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 25830507..25830777 | 1..271 | 100 | -> | Plus |
arm_3R | 25831010..25831143 | 272..405 | 100 | -> | Plus |
arm_3R | 25835400..25836074 | 406..1080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29745616..29745886 | 1..271 | 100 | -> | Plus |
3R | 29746119..29746252 | 272..405 | 100 | -> | Plus |
3R | 29750509..29751183 | 406..1080 | 100 | Plus |
Translation from 249 to 707
> LD16456.hyp MAEESFYGVTLTAESDSVTWDVDEDYARGQKLVIKQILLGAEAKENEFNV VEVNTPKDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPVYIH GHNIKDDVEVVDMEEDDEEDDVAEDEEDEHPKKRAKIENAADGKNAKNNK KK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nlp-PB | 152 | CG7917-PB | 1..152 | 1..152 | 780 | 100 | Plus |
Nlp-PA | 152 | CG7917-PA | 1..152 | 1..152 | 780 | 100 | Plus |
CG7911-PB | 156 | CG7911-PB | 1..156 | 1..152 | 283 | 45.7 | Plus |
CG7911-PA | 156 | CG7911-PA | 1..156 | 1..152 | 283 | 45.7 | Plus |
Translation from 249 to 707
> LD16456.pep MAEESFYGVTLTAESDSVTWDVDEDYARGQKLVIKQILLGAEAKENEFNV VEVNTPKDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPVYIH GHNIKDDVEVVDMEEDDEEDDVAEDEEDEHPKKRAKIENAADGKNAKNNK KK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18816-PA | 152 | GF18816-PA | 1..138 | 1..138 | 549 | 94.2 | Plus |
Dana\GF16212-PA | 154 | GF16212-PA | 1..154 | 1..152 | 278 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11720-PA | 152 | GG11720-PA | 1..152 | 1..152 | 777 | 100 | Plus |
Dere\GG11978-PA | 156 | GG11978-PA | 1..111 | 1..101 | 261 | 52.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18574-PA | 154 | GH18574-PA | 1..143 | 1..142 | 533 | 84 | Plus |
Dgri\GH22165-PA | 152 | GH22165-PA | 1..108 | 1..101 | 250 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nlp-PB | 152 | CG7917-PB | 1..152 | 1..152 | 780 | 100 | Plus |
Nlp-PA | 152 | CG7917-PA | 1..152 | 1..152 | 780 | 100 | Plus |
Nph-PB | 156 | CG7911-PB | 1..156 | 1..152 | 283 | 45.7 | Plus |
Nph-PA | 156 | CG7911-PA | 1..156 | 1..152 | 283 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10803-PA | 153 | GI10803-PA | 1..153 | 1..152 | 562 | 82.5 | Plus |
Dmoj\GI21966-PA | 156 | GI21966-PA | 1..156 | 1..152 | 286 | 44.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14018-PA | 156 | GL14018-PA | 1..138 | 1..138 | 559 | 97.1 | Plus |
Dper\GL13489-PA | 157 | GL13489-PA | 1..111 | 1..101 | 264 | 52.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20685-PA | 156 | GA20685-PA | 1..138 | 1..138 | 559 | 97.1 | Plus |
Dpse\GA20679-PA | 157 | GA20679-PA | 1..111 | 1..101 | 264 | 52.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12851-PA | 152 | GM12851-PA | 1..152 | 1..152 | 777 | 100 | Plus |
Dsec\GM12196-PA | 156 | GM12196-PA | 1..111 | 1..101 | 257 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21493-PA | 152 | GD21493-PA | 1..152 | 1..152 | 777 | 100 | Plus |
Dsim\GD17477-PA | 156 | GD17477-PA | 1..111 | 1..101 | 257 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14400-PA | 154 | GJ14400-PA | 1..154 | 1..152 | 562 | 83.2 | Plus |
Dvir\GJ16333-PA | 120 | GJ16333-PA | 8..114 | 6..111 | 307 | 53.3 | Plus |
Dvir\GJ14325-PA | 156 | GJ14325-PA | 1..111 | 1..101 | 264 | 51.4 | Plus |