Clone LD16566 Report

Search the DGRC for LD16566

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:165
Well:66
Vector:pBS SK-
Associated Gene/TranscriptHip1-RA
Protein status:LD16566.pep: gold
Preliminary Size:3995
Sequenced Size:3932

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10971 2002-06-30 Blastp of sequenced clone
CG10971 2003-01-01 Sim4 clustering to Release 3
CG10971 2008-04-29 Release 5.5 accounting
CG10971 2008-08-15 Release 5.9 accounting
CG10971 2008-12-18 5.12 accounting

Clone Sequence Records

LD16566.complete Sequence

3932 bp (3932 high quality bases) assembled on 2002-06-30

GenBank Submission: AY129442

> LD16566.complete
CTTTTATCGATAAAGGAAAACAACATTTGTTTATATGACTAATTTACTCT
TACACTCATTGTTTCATACACGCACACGATCGGAATCCGAATGAATACGA
ACGCGACCAATACGAAAACAATGGCCAACATTGTTGATAAGATAAGATAA
CTCCCGTTTCCAATGTCTTTGCTGTCTTTGCTCTAATGCACATATATCGC
GCTGCGAATGATTCGAATTTGTTCAGCAAGTACGCCAAGAATTGTCAGTA
AACAATGGCAACTCACGCCGAAAAGGAGTTCTACCACCTGAACGTCAGCG
TGTCCAAAGCTTTAAATGGCCTGGAAGCGCCACTCAAAACCAAACATGCC
CGCTCCATTATTATTATGATACACAAGGCCAAAGAGGCCAAAACATTCTG
GATGATCATCTCCCGGCAGCCTTTGATGCAGAGTAGATTTACTGCCTGGA
AGTTTTCGCATCTGCTGCACAAGGTCCTGCGAGAGGGTCATGAAAGTGCC
ATCCGCCACTCGCAGAGCCACAAGAAGATGATACTGGAGGTGGGAAAAAT
GTGGGGCCTGCTGCAGGACGATATTGGATGCTGCATACAGGCGTATAGTA
AGCTCTTGGCCACAAAATTAAACTTCCACGACAAAAATCGAATGTTTCCC
GGCACCCTGAACATTTCGTTCACGGAACTCTTCATTGCTGTGGATAGGGA
TTTAAATTATTGTTTTCAACTGTGCGTGGAAATTTTCGACTACTTGGAGG
ATATAATTGCGCTGCAATTGACGATATTTTCATCTATGGAAAAGTACAGA
ATGTCGTCGATGACACCGCAGGGACAATGTAGATTAGCGCCAATAGTTTG
CCTTATCCAGGATTCCAATGCGTTGTACGATTTAAGCGTTCGGTTAATGT
TTAAACTACACGATGGTGTACCATACGACGTTGTTTCCGGACACAGAGAT
CGCTTTCACGGTCTGTTTTTAAAGTTGAAGAGTTTTTACAACAACGTGCG
ACCGCTTCAGTATTTCAAGGACCTAATAACAATCCCGGAATTGCCGGACT
CAAGTCCTAACTTCAAGTCCCAAAACGATTTCACCAGTTATGTACCGCCA
GTGGTTCACGTTCCCCAGGAGCCCGATCCGGTTGTTGAAGACCTTGTGGA
TACCAACAATCACGAGCTGGAAGCCTTCAGTCAAGCCCAGCAGCAGCTTA
GCATGTTGGAGGGTATAATCAGCGAGAAAGAGGCTAGCATTGAGGAGCTG
TCATTCAAATTGGACGCAATGCAAAAAAATTTCGACGCACTGCAGCAAAG
CTACAGACACGACGTTCAGGAGTTGCAACAGAACAATACTGTGCTGTCAA
ATGATCTGGTCTTGGCGAGAGAAATGTGTGCCACCTTTCGGATGCAAAAT
GACGATCTTGAGATGCAACTGAATCAGAACCCAATTCTTTTACAAAAAGC
TATGGAGGAAGAAGAAAAGCACAAGTTGTCGTCGGAAAAGTTTAATAAAC
TTAAAACTCTATACACAAAGATTCGAGATGAGCACATTCAGCTGCTGAGA
GAGCAAAGTGATTGCAACAAGTCCTTAAATAAAGAGAAACAAGTAAACTC
ACAACTATTGTTGGAAACTAAGGAGCTTACCAATGAAATTTCCAAAATTA
AAGTAAACGTAGAGGAAAAAGAGAAAACAAACTTGATTCTGCAAAAGCAA
ATCGAAGAGCACAAGGAGAAAATAGCACATCTTGAAGCAGTCAAAAACGA
GATGAAGGAGAAATTCGATGATGTGGTTAAACAAAAGGAAATTCAGGAAC
TCGATATTATTTCCACTTCCGAAAACCTGAGGCTAAATTGCCTCAAAGTC
GAAGAGCTTAATGGAAACCTCAATGACACCCTGGAAAAACTGTCGAACGC
CGAAAGCCAAATAAATGCAAAGACCGAGGATATCGAGAAAATGCTAAAAG
CTTTTGAAGCGGAAAAGGCATTGCTCTTAACTCAGATTGAACAACAGAGT
GTTGAAAGTAAAAGCCATAGTGAAGCTCAAAACGCTCAATTGCAAGAAAT
AATGGATAACTTGGAACAAAAGGATAAAGAGTTCAATGAAGTTAAGCTTC
AGCTGTCCAGCGCAGAAAGCCAAATCAGCTTAAAGGCATTGGAAATTCAA
AACAATTTAAAGGCATTTGAAGCGGAAAAATCAGTGCTATTAACTAAAAT
AGAGCAGTTAGGTATAGAGCATAAAAACAACAGCGAAGCACAAAATGCTC
AATTGCAGCTAACTTTAAACAACTTGGAGCAAAATGAGAGTGCATTACAG
CAAACCCAGGAAATTGTGAATCAATTGAGGCAGGAAAATGCTTCAGCGGG
TCAGCGTAACGAGGATTTGCAAAGCAAACTCTCGCTTACTGAGGTAAAAC
TAACCCAAGCAACACAGCAAATTGATGCCGTGACAAGTTCGTACCAAATC
TGTAGTACCGATTTGAGTGAACTCAGAAAATTGGTGATCAAGACTGTAAA
GGAAATATGCAATTCGAAGTTGAGCGGATCGGAACAACAGCCTTTGGATG
CGGTGCCAAACATAATACGCGAAATGGAGACCATTTTAAATAAGTTCAAT
AACGCATCGGCTATAAACTATGTTGCTTCAACCGAAGGACTGCAAAATGT
TATGTATCTGGGTTATGTATTTATAAAACTATACGATCAATGTGATGTTA
TCTACAAAACAACAACTGCAATTGAGACAGGTCAGGAAATTTTCTCAAAA
ACAAATTTGTTATGTACCGATATCTGTCAATTGTTCCAATACTTATTAAA
TAATGAAACAAAAGAACCCGAGAGACAGAAAACAATCACTGATATACAAA
CAAAGCTGAGAGATATTGAAAAGCTGATTGAGAAAATAAAGGCATCATTT
GAACAGAAGATTGATTTAGATAAGCTGCTCGAAATCGAGCTTCGCGAGAT
GGACGCTGCGATTGATGATGCAGCCTCCAAAATTACAGATCTACTGGCAA
AGGCTCGAGAGAAGGACAACCAAACCAATTTAGAGGTAAACGGAAAAATA
GTGGATGCGTGTACCACCTTGATGGAATGTGTCAAAGCTCTAATCCAAAA
ATCTCGTCTCCTGCAACACGAAATCGTGGCTTCCCAAAAAGGAAATGCGA
GTGCTAATGAGTTTTATAGGCGGAACAGTCAGTGGTCAGATGGTTTGATA
TCCGCCTCGAAAAGTGTGGCGAAGGCAGCCAACTATCTGGTGGAAGCTGC
AAACAAGGCTATTGAAAGTGAATCTGGCAAGAACTTTGAACTCATTGTGG
CTGCCCAAGAAATTGCTGCCTGCACGACCCAAATGGTTATTGCGAGCAAA
GTCAAGGCTGAACGTAATAGTCAAAAGCTAACCGACCTCACAAAAGCCTC
GCGAAGCGTAACGCAGGCAACAGGAACTCTGGTCGCCACCGTGAAGGATT
GCAACTCCCAGCTGGAGCAGCAGAGTGAAATAGAACTTTCTAAGCTAACG
CCATCACAGATTAAAACGATGGAAATGGAAATTCATGTTAAAGTACTCGA
AATCGAACAAGCTCTCCAAATGCAACGACTAAAACTCTCATCGTTTCGTA
AGGAGCATTACAAGAATGCCGATTATTAAATACCATATTTATTAATGTTA
CTAACTTTACAAACATTCTTTTTTGTATTAATGCCCGTCATGACAAATAA
TATATCTACACAATATTTACACTGCGGTCATTTTATCCTACAATGAATCC
GTAATATCTGTTTATAGTATTCCGTGTCGATCGCTTTTTGATCCTTGATT
TATATCACACCATAGTATGTGGGTTCATTATTTCTTAAATGTTTATTTTA
CTTACTACTTGAAATTAAAATAGCACTTATTGCCAAAGAAAATAAAATGT
AACATTTGTTGTCAAAAAAAAAAAAAAAAAAA

LD16566.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:44:14
Subject Length Description Subject Range Query Range Score Percent Strand
Hip1-RA 4107 Hip1-RA 24..3940 1..3917 19585 100 Plus
Hip1-RB 4282 Hip1-RB 489..4115 291..3917 18135 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:32:02
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 12758978..12759751 3913..3140 3870 100 Minus
chr3L 24539361 chr3L 12760770..12761518 2300..1552 3745 100 Minus
chr3L 24539361 chr3L 12761747..12762478 1443..712 3660 100 Minus
chr3L 24539361 chr3L 12760278..12760716 2736..2298 2195 100 Minus
chr3L 24539361 chr3L 12762537..12762959 712..290 2115 100 Minus
chr3L 24539361 chr3L 12759806..12760212 3142..2736 2035 100 Minus
chr3L 24539361 chr3L 12763650..12763939 290..1 1450 100 Minus
chr3L 24539361 chr3L 12761581..12761690 1553..1444 550 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:04:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:32:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12768599..12769376 3917..3140 3890 100 Minus
3L 28110227 3L 12770395..12771143 2300..1552 3745 100 Minus
3L 28110227 3L 12771372..12772103 1443..712 3660 100 Minus
3L 28110227 3L 12769903..12770341 2736..2298 2195 100 Minus
3L 28110227 3L 12772162..12772584 712..290 2115 100 Minus
3L 28110227 3L 12769431..12769837 3142..2736 2035 100 Minus
3L 28110227 3L 12773275..12773564 290..1 1450 100 Minus
3L 28110227 3L 12771206..12771315 1553..1444 550 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:17:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 12761699..12762476 3917..3140 3890 100 Minus
3L 28103327 3L 12763495..12764243 2300..1552 3745 100 Minus
3L 28103327 3L 12764472..12765203 1443..712 3660 100 Minus
3L 28103327 3L 12763003..12763441 2736..2298 2195 100 Minus
3L 28103327 3L 12765262..12765684 712..290 2115 100 Minus
3L 28103327 3L 12762531..12762937 3142..2736 2035 100 Minus
3L 28103327 3L 12766375..12766664 290..1 1450 100 Minus
3L 28103327 3L 12764306..12764415 1553..1444 550 100 Minus
Blast to na_te.dros performed 2019-03-15 20:32:00
Subject Length Description Subject Range Query Range Score Percent Strand
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6346..6553 2045..2253 141 56.5 Plus
S-element 1736 S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). 119..196 3838..3912 122 65.8 Plus

LD16566.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:32:46 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 12761581..12761690 1444..1553 100 <- Minus
chr3L 12758978..12759749 3142..3913 100 <- Minus
chr3L 12759807..12760211 2737..3141 100 <- Minus
chr3L 12760278..12760713 2301..2736 100 <- Minus
chr3L 12760770..12761516 1554..2300 100 <- Minus
chr3L 12761747..12762477 713..1443 100 <- Minus
chr3L 12762537..12762958 291..712 100 <- Minus
chr3L 12763650..12763939 1..290 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:51:28 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
CG10971-RA 1..3375 255..3629 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:17:59 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
Hip1-RA 1..3375 255..3629 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 04:54:23 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
Hip1-RA 1..3375 255..3629 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:09:07 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
CG10971-RA 1..3375 255..3629 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:38:22 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
Hip1-RA 1..3375 255..3629 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:42:36 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
CG10971-RA 6..3918 1..3913 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:17:58 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
Hip1-RA 6..3918 1..3913 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:54:23 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
Hip1-RA 10..3922 1..3913 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:09:07 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
CG10971-RA 6..3918 1..3913 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:38:22 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
Hip1-RA 10..3922 1..3913 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:32:46 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12771206..12771315 1444..1553 100 <- Minus
3L 12768603..12769374 3142..3913 100 <- Minus
3L 12769432..12769836 2737..3141 100 <- Minus
3L 12769903..12770338 2301..2736 100 <- Minus
3L 12770395..12771141 1554..2300 100 <- Minus
3L 12771372..12772102 713..1443 100 <- Minus
3L 12772162..12772583 291..712 100 <- Minus
3L 12773275..12773564 1..290 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:32:46 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12771206..12771315 1444..1553 100 <- Minus
3L 12768603..12769374 3142..3913 100 <- Minus
3L 12769432..12769836 2737..3141 100 <- Minus
3L 12769903..12770338 2301..2736 100 <- Minus
3L 12770395..12771141 1554..2300 100 <- Minus
3L 12771372..12772102 713..1443 100 <- Minus
3L 12772162..12772583 291..712 100 <- Minus
3L 12773275..12773564 1..290 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:32:46 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12771206..12771315 1444..1553 100 <- Minus
3L 12768603..12769374 3142..3913 100 <- Minus
3L 12769432..12769836 2737..3141 100 <- Minus
3L 12769903..12770338 2301..2736 100 <- Minus
3L 12770395..12771141 1554..2300 100 <- Minus
3L 12771372..12772102 713..1443 100 <- Minus
3L 12772162..12772583 291..712 100 <- Minus
3L 12773275..12773564 1..290 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:54:23 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12761703..12762474 3142..3913 100 <- Minus
arm_3L 12762532..12762936 2737..3141 100 <- Minus
arm_3L 12763003..12763438 2301..2736 100 <- Minus
arm_3L 12763495..12764241 1554..2300 100 <- Minus
arm_3L 12764306..12764415 1444..1553 100 <- Minus
arm_3L 12764472..12765202 713..1443 100 <- Minus
arm_3L 12765262..12765683 291..712 100 <- Minus
arm_3L 12766375..12766664 1..290 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:41:11 Download gff for LD16566.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12761703..12762474 3142..3913 100 <- Minus
3L 12762532..12762936 2737..3141 100 <- Minus
3L 12763003..12763438 2301..2736 100 <- Minus
3L 12763495..12764241 1554..2300 100 <- Minus
3L 12764306..12764415 1444..1553 100 <- Minus
3L 12764472..12765202 713..1443 100 <- Minus
3L 12765262..12765683 291..712 100 <- Minus
3L 12766375..12766664 1..290 100   Minus

LD16566.pep Sequence

Translation from 254 to 3628

> LD16566.pep
MATHAEKEFYHLNVSVSKALNGLEAPLKTKHARSIIIMIHKAKEAKTFWM
IISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSHKKMILEVGKMW
GLLQDDIGCCIQAYSKLLATKLNFHDKNRMFPGTLNISFTELFIAVDRDL
NYCFQLCVEIFDYLEDIIALQLTIFSSMEKYRMSSMTPQGQCRLAPIVCL
IQDSNALYDLSVRLMFKLHDGVPYDVVSGHRDRFHGLFLKLKSFYNNVRP
LQYFKDLITIPELPDSSPNFKSQNDFTSYVPPVVHVPQEPDPVVEDLVDT
NNHELEAFSQAQQQLSMLEGIISEKEASIEELSFKLDAMQKNFDALQQSY
RHDVQELQQNNTVLSNDLVLAREMCATFRMQNDDLEMQLNQNPILLQKAM
EEEEKHKLSSEKFNKLKTLYTKIRDEHIQLLREQSDCNKSLNKEKQVNSQ
LLLETKELTNEISKIKVNVEEKEKTNLILQKQIEEHKEKIAHLEAVKNEM
KEKFDDVVKQKEIQELDIISTSENLRLNCLKVEELNGNLNDTLEKLSNAE
SQINAKTEDIEKMLKAFEAEKALLLTQIEQQSVESKSHSEAQNAQLQEIM
DNLEQKDKEFNEVKLQLSSAESQISLKALEIQNNLKAFEAEKSVLLTKIE
QLGIEHKNNSEAQNAQLQLTLNNLEQNESALQQTQEIVNQLRQENASAGQ
RNEDLQSKLSLTEVKLTQATQQIDAVTSSYQICSTDLSELRKLVIKTVKE
ICNSKLSGSEQQPLDAVPNIIREMETILNKFNNASAINYVASTEGLQNVM
YLGYVFIKLYDQCDVIYKTTTAIETGQEIFSKTNLLCTDICQLFQYLLNN
ETKEPERQKTITDIQTKLRDIEKLIEKIKASFEQKIDLDKLLEIELREMD
AAIDDAASKITDLLAKAREKDNQTNLEVNGKIVDACTTLMECVKALIQKS
RLLQHEIVASQKGNASANEFYRRNSQWSDGLISASKSVAKAANYLVEAAN
KAIESESGKNFELIVAAQEIAACTTQMVIASKVKAERNSQKLTDLTKASR
SVTQATGTLVATVKDCNSQLEQQSEIELSKLTPSQIKTMEMEIHVKVLEI
EQALQMQRLKLSSFRKEHYKNADY*

LD16566.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 04:46:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10868-PA 1124 GF10868-PA 1..1124 1..1124 4927 81.4 Plus
Dana\GF24334-PA 2847 GF24334-PA 2393..2540 974..1122 171 36.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 04:46:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13806-PA 1124 GG13806-PA 1..1124 1..1124 5598 93.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 04:46:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16831-PA 909 GH16831-PA 1..468 1..464 1695 65 Plus
Dgri\GH16831-PA 909 GH16831-PA 446..909 659..1124 1209 54 Plus
Dgri\GH22519-PA 727 GH22519-PA 264..403 974..1116 166 36.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:12
Subject Length Description Subject Range Query Range Score Percent Strand
Hip1-PA 1124 CG10971-PA 1..1124 1..1124 5630 100 Plus
Hip1-PB 1087 CG10971-PB 1..1087 38..1124 5445 100 Plus
CLIP-190-PN 1598 CG5020-PN 478..1278 310..1112 292 20.4 Plus
CLIP-190-PR 1601 CG5020-PR 481..1281 310..1112 292 20.4 Plus
CLIP-190-PP 1623 CG5020-PP 503..1303 310..1112 292 20.4 Plus
CLIP-190-PC 1652 CG5020-PC 532..1332 310..1112 292 20.4 Plus
CLIP-190-PS 1653 CG5020-PS 533..1333 310..1112 292 20.4 Plus
CLIP-190-PM 1668 CG5020-PM 548..1348 310..1112 292 20.4 Plus
CLIP-190-PB 1689 CG5020-PB 569..1369 310..1112 292 20.4 Plus
CLIP-190-PA 1690 CG5020-PA 570..1370 310..1112 292 20.4 Plus
CLIP-190-PN 1598 CG5020-PN 636..1445 324..1080 286 20.7 Plus
CLIP-190-PR 1601 CG5020-PR 639..1448 324..1080 286 20.7 Plus
CLIP-190-PP 1623 CG5020-PP 661..1470 324..1080 286 20.7 Plus
CLIP-190-PC 1652 CG5020-PC 690..1499 324..1080 286 20.7 Plus
CLIP-190-PS 1653 CG5020-PS 691..1500 324..1080 286 20.7 Plus
CLIP-190-PM 1668 CG5020-PM 706..1515 324..1080 286 20.7 Plus
CLIP-190-PB 1689 CG5020-PB 727..1536 324..1080 286 20.7 Plus
CLIP-190-PA 1690 CG5020-PA 728..1537 324..1080 286 20.7 Plus
Golgin245-PA 1489 CG3493-PA 330..1196 296..1113 242 21.7 Plus
zip-PH 1964 CG15792-PH 852..1647 314..1099 220 21.8 Plus
zip-PG 1971 CG15792-PG 844..1639 314..1099 220 21.8 Plus
zip-PE 1971 CG15792-PE 844..1639 314..1099 220 21.8 Plus
zip-PC 1971 CG15792-PC 844..1639 314..1099 220 21.8 Plus
zip-PF 1979 CG15792-PF 852..1647 314..1099 220 21.8 Plus
zip-PB 2011 CG15792-PB 884..1679 314..1099 220 21.8 Plus
zip-PD 2016 CG15792-PD 889..1684 314..1099 220 21.8 Plus
zip-PI 2024 CG15792-PI 897..1692 314..1099 220 21.8 Plus
zip-PA 2056 CG15792-PA 929..1724 314..1099 220 21.8 Plus
Gmap-PC 1208 CG33206-PC 307..1035 314..1089 218 19.1 Plus
Gmap-PB 1208 CG33206-PB 307..1035 314..1089 218 19.1 Plus
Gmap-PA 1398 CG33206-PA 497..1225 314..1089 218 19.1 Plus
rhea-PH 2689 CG6831-PH 2308..2540 891..1122 218 33.3 Plus
rhea-PG 2815 CG6831-PG 2287..2519 891..1122 218 33.3 Plus
rhea-PF 2836 CG6831-PF 2308..2540 891..1122 218 33.3 Plus
rhea-PE 2836 CG6831-PE 2308..2540 891..1122 218 33.3 Plus
rhea-PB 2836 CG6831-PB 2308..2540 891..1122 218 33.3 Plus
zip-PH 1964 CG15792-PH 754..1454 295..1102 217 18.6 Plus
zip-PG 1971 CG15792-PG 746..1446 295..1102 217 18.6 Plus
zip-PE 1971 CG15792-PE 746..1446 295..1102 217 18.6 Plus
zip-PC 1971 CG15792-PC 746..1446 295..1102 217 18.6 Plus
zip-PF 1979 CG15792-PF 754..1454 295..1102 217 18.6 Plus
zip-PB 2011 CG15792-PB 786..1486 295..1102 217 18.6 Plus
zip-PD 2016 CG15792-PD 791..1491 295..1102 217 18.6 Plus
zip-PI 2024 CG15792-PI 799..1499 295..1102 217 18.6 Plus
zip-PA 2056 CG15792-PA 831..1531 295..1102 217 18.6 Plus
Mhc-PU 1949 CG17927-PU 1000..1824 299..1101 213 19.9 Plus
Mhc-PN 1949 CG17927-PN 1000..1824 299..1101 213 19.9 Plus
Mhc-PE 1962 CG17927-PE 1000..1824 299..1101 213 19.9 Plus
Mhc-PH 1962 CG17927-PH 1000..1824 299..1101 213 19.9 Plus
Mhc-PT 1962 CG17927-PT 1000..1824 299..1101 213 19.9 Plus
Mhc-PO 1962 CG17927-PO 1000..1824 299..1101 213 19.9 Plus
Mhc-PF 1962 CG17927-PF 1000..1824 299..1101 213 19.9 Plus
Mhc-PQ 1962 CG17927-PQ 1000..1824 299..1101 213 19.9 Plus
Mhc-PI 1962 CG17927-PI 1000..1824 299..1101 213 19.9 Plus
Mhc-PG 1962 CG17927-PG 1000..1824 299..1101 213 19.9 Plus
Mhc-PA 1962 CG17927-PA 1000..1824 299..1101 213 19.9 Plus
Mhc-PD 1962 CG17927-PD 1000..1824 299..1101 213 19.9 Plus
Mhc-PC 1962 CG17927-PC 1000..1824 299..1101 213 19.9 Plus
Mhc-PR 1962 CG17927-PR 1000..1824 299..1101 213 19.9 Plus
mud-PK 1912 CG12047-PK 790..1490 414..1117 212 20.1 Plus
mud-PL 2501 CG12047-PL 790..1490 414..1117 212 19.8 Plus
Mhc-PL 1936 CG17927-PL 851..1594 395..1123 211 20.3 Plus
Mhc-PM 1936 CG17927-PM 851..1594 395..1123 211 20.3 Plus
Mhc-PK 1936 CG17927-PK 851..1594 395..1123 211 20.3 Plus
Mhc-PP 1949 CG17927-PP 851..1594 395..1123 211 20.3 Plus
Mhc-PV 1962 CG17927-PV 851..1594 395..1123 211 20.3 Plus
Mhc-PS 1962 CG17927-PS 851..1594 395..1123 211 20.3 Plus
Mhc-PB 1962 CG17927-PB 851..1594 395..1123 211 20.3 Plus
Mhc-PL 1936 CG17927-PL 1000..1824 299..1101 206 19.9 Plus
Mhc-PM 1936 CG17927-PM 1000..1824 299..1101 206 19.9 Plus
Mhc-PK 1936 CG17927-PK 1000..1824 299..1101 206 19.9 Plus
Mhc-PP 1949 CG17927-PP 1000..1824 299..1101 206 19.9 Plus
Mhc-PV 1962 CG17927-PV 1000..1824 299..1101 206 19.9 Plus
Mhc-PS 1962 CG17927-PS 1000..1824 299..1101 206 19.9 Plus
Mhc-PB 1962 CG17927-PB 1000..1824 299..1101 206 19.9 Plus
Mhc-PU 1949 CG17927-PU 851..1594 395..1123 204 19.9 Plus
Mhc-PN 1949 CG17927-PN 851..1594 395..1123 204 19.9 Plus
Mhc-PE 1962 CG17927-PE 851..1594 395..1123 204 19.9 Plus
Mhc-PH 1962 CG17927-PH 851..1594 395..1123 204 19.9 Plus
Mhc-PT 1962 CG17927-PT 851..1594 395..1123 204 19.9 Plus
Mhc-PO 1962 CG17927-PO 851..1594 395..1123 204 19.9 Plus
Mhc-PF 1962 CG17927-PF 851..1594 395..1123 204 19.9 Plus
Mhc-PQ 1962 CG17927-PQ 851..1594 395..1123 204 19.9 Plus
Mhc-PI 1962 CG17927-PI 851..1594 395..1123 204 19.9 Plus
Mhc-PG 1962 CG17927-PG 851..1594 395..1123 204 19.9 Plus
Mhc-PA 1962 CG17927-PA 851..1594 395..1123 204 19.9 Plus
Mhc-PD 1962 CG17927-PD 851..1594 395..1123 204 19.9 Plus
Mhc-PC 1962 CG17927-PC 851..1594 395..1123 204 19.9 Plus
Mhc-PR 1962 CG17927-PR 851..1594 395..1123 204 19.9 Plus
Golgin245-PA 1489 CG3493-PA 510..1336 249..1077 200 20.2 Plus
Golgin245-PA 1489 CG3493-PA 187..991 297..1116 194 18.6 Plus
mud-PK 1912 CG12047-PK 1092..1871 304..1116 193 18.9 Plus
zip-PH 1964 CG15792-PH 1163..1912 296..1117 191 18.9 Plus
zip-PG 1971 CG15792-PG 1155..1904 296..1117 191 18.9 Plus
zip-PE 1971 CG15792-PE 1155..1904 296..1117 191 18.9 Plus
zip-PC 1971 CG15792-PC 1155..1904 296..1117 191 18.9 Plus
zip-PF 1979 CG15792-PF 1163..1912 296..1117 191 18.9 Plus
zip-PB 2011 CG15792-PB 1195..1944 296..1117 191 18.9 Plus
zip-PD 2016 CG15792-PD 1200..1949 296..1117 191 18.9 Plus
zip-PI 2024 CG15792-PI 1208..1957 296..1117 191 18.9 Plus
zip-PA 2056 CG15792-PA 1240..1989 296..1117 191 18.9 Plus
CLIP-190-PN 1598 CG5020-PN 1016..1519 252..788 188 21.3 Plus
CLIP-190-PR 1601 CG5020-PR 1019..1522 252..788 188 21.3 Plus
CLIP-190-PP 1623 CG5020-PP 1041..1544 252..788 188 21.3 Plus
CLIP-190-PC 1652 CG5020-PC 1070..1573 252..788 188 21.3 Plus
CLIP-190-PS 1653 CG5020-PS 1071..1574 252..788 188 21.3 Plus
CLIP-190-PM 1668 CG5020-PM 1086..1589 252..788 188 21.3 Plus
CLIP-190-PB 1689 CG5020-PB 1107..1610 252..788 188 21.3 Plus
CLIP-190-PA 1690 CG5020-PA 1108..1611 252..788 188 21.3 Plus
mud-PL 2501 CG12047-PL 1222..1946 295..1011 188 20.3 Plus
mud-PK 1912 CG12047-PK 1222..1850 295..912 182 20.7 Plus
CLIP-190-PN 1598 CG5020-PN 284..936 424..1081 178 21.1 Plus
CLIP-190-PR 1601 CG5020-PR 287..939 424..1081 178 21.1 Plus
CLIP-190-PP 1623 CG5020-PP 309..961 424..1081 178 21.1 Plus
CLIP-190-PC 1652 CG5020-PC 338..990 424..1081 178 21.1 Plus
CLIP-190-PM 1668 CG5020-PM 354..1006 424..1081 178 21.1 Plus
CLIP-190-PB 1689 CG5020-PB 375..1027 424..1081 178 21.1 Plus
CLIP-190-PA 1690 CG5020-PA 376..1028 424..1081 178 21.1 Plus
Gmap-PC 1208 CG33206-PC 605..1130 309..827 175 21.7 Plus
Gmap-PB 1208 CG33206-PB 605..1130 309..827 175 21.7 Plus
Gmap-PA 1398 CG33206-PA 795..1320 309..827 175 21.7 Plus
Mhc-PU 1949 CG17927-PU 1424..1920 294..741 171 19.6 Plus
Mhc-PN 1949 CG17927-PN 1424..1920 294..741 171 19.6 Plus
Mhc-PE 1962 CG17927-PE 1424..1920 294..741 171 19.6 Plus
Mhc-PH 1962 CG17927-PH 1424..1920 294..741 171 19.6 Plus
Mhc-PT 1962 CG17927-PT 1424..1920 294..741 171 19.6 Plus
Mhc-PO 1962 CG17927-PO 1424..1920 294..741 171 19.6 Plus
Mhc-PF 1962 CG17927-PF 1424..1920 294..741 171 19.6 Plus
Mhc-PQ 1962 CG17927-PQ 1424..1920 294..741 171 19.6 Plus
Mhc-PI 1962 CG17927-PI 1424..1920 294..741 171 19.6 Plus
Mhc-PG 1962 CG17927-PG 1424..1920 294..741 171 19.6 Plus
Mhc-PA 1962 CG17927-PA 1424..1920 294..741 171 19.6 Plus
Mhc-PD 1962 CG17927-PD 1424..1920 294..741 171 19.6 Plus
Mhc-PC 1962 CG17927-PC 1424..1920 294..741 171 19.6 Plus
Mhc-PR 1962 CG17927-PR 1424..1920 294..741 171 19.6 Plus
Mhc-PL 1936 CG17927-PL 1424..1920 294..741 171 19.6 Plus
Mhc-PM 1936 CG17927-PM 1424..1920 294..741 171 19.6 Plus
Mhc-PK 1936 CG17927-PK 1424..1920 294..741 171 19.6 Plus
Mhc-PP 1949 CG17927-PP 1424..1920 294..741 171 19.6 Plus
Mhc-PV 1962 CG17927-PV 1424..1920 294..741 171 19.6 Plus
Mhc-PS 1962 CG17927-PS 1424..1920 294..741 171 19.6 Plus
Mhc-PB 1962 CG17927-PB 1424..1920 294..741 171 19.6 Plus
mud-PK 1912 CG12047-PK 1122..1786 297..993 166 21.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 04:46:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11924-PA 969 GI11924-PA 1..545 1..538 1680 61.7 Plus
Dmoj\GI11924-PA 969 GI11924-PA 537..969 691..1124 1205 54.6 Plus
Dmoj\GI12908-PA 2856 GI12908-PA 2394..2533 974..1116 165 36.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 04:46:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24933-PA 1123 GL24933-PA 1..1123 1..1124 3974 68.1 Plus
Dper\GL22532-PA 2787 GL22532-PA 2315..2454 974..1116 164 36.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 04:46:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23562-PB 1060 GA23562-PB 1..1060 1..1124 3596 64 Plus
Dpse\GA19890-PA 2820 GA19890-PA 2348..2487 974..1116 165 36.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 04:46:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24632-PA 902 GM24632-PA 1..612 1..612 3249 97.7 Plus
Dsec\GM24632-PA 902 GM24632-PA 636..902 858..1124 1309 95.9 Plus
Dsec\GM25065-PA 2836 GM25065-PA 2345..2540 925..1122 173 32.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 04:46:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12701-PA 1124 GD12701-PA 1..1124 1..1124 5794 97.2 Plus
Dsim\GD14104-PA 507 GD14104-PA 264..411 974..1122 159 34.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 04:46:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13799-PA 1112 GJ13799-PA 1..1112 1..1124 3011 54.1 Plus
Dvir\GJ13049-PA 2859 GJ13049-PA 2394..2533 974..1116 165 36.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 04:46:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20260-PA 1010 GK20260-PA 1..517 1..507 1783 63.6 Plus
Dwil\GK20260-PA 1010 GK20260-PA 482..1010 596..1124 1403 55.5 Plus
Dwil\GK13336-PA 2855 GK13336-PA 2393..2540 974..1122 168 36.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 04:46:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20099-PA 1124 GE20099-PA 1..1124 1..1124 5644 94.5 Plus
Dyak\GE20752-PA 2836 GE20752-PA 2352..2540 939..1122 163 32.5 Plus

LD16566.hyp Sequence

Translation from 254 to 3628

> LD16566.hyp
MATHAEKEFYHLNVSVSKALNGLEAPLKTKHARSIIIMIHKAKEAKTFWM
IISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSHKKMILEVGKMW
GLLQDDIGCCIQAYSKLLATKLNFHDKNRMFPGTLNISFTELFIAVDRDL
NYCFQLCVEIFDYLEDIIALQLTIFSSMEKYRMSSMTPQGQCRLAPIVCL
IQDSNALYDLSVRLMFKLHDGVPYDVVSGHRDRFHGLFLKLKSFYNNVRP
LQYFKDLITIPELPDSSPNFKSQNDFTSYVPPVVHVPQEPDPVVEDLVDT
NNHELEAFSQAQQQLSMLEGIISEKEASIEELSFKLDAMQKNFDALQQSY
RHDVQELQQNNTVLSNDLVLAREMCATFRMQNDDLEMQLNQNPILLQKAM
EEEEKHKLSSEKFNKLKTLYTKIRDEHIQLLREQSDCNKSLNKEKQVNSQ
LLLETKELTNEISKIKVNVEEKEKTNLILQKQIEEHKEKIAHLEAVKNEM
KEKFDDVVKQKEIQELDIISTSENLRLNCLKVEELNGNLNDTLEKLSNAE
SQINAKTEDIEKMLKAFEAEKALLLTQIEQQSVESKSHSEAQNAQLQEIM
DNLEQKDKEFNEVKLQLSSAESQISLKALEIQNNLKAFEAEKSVLLTKIE
QLGIEHKNNSEAQNAQLQLTLNNLEQNESALQQTQEIVNQLRQENASAGQ
RNEDLQSKLSLTEVKLTQATQQIDAVTSSYQICSTDLSELRKLVIKTVKE
ICNSKLSGSEQQPLDAVPNIIREMETILNKFNNASAINYVASTEGLQNVM
YLGYVFIKLYDQCDVIYKTTTAIETGQEIFSKTNLLCTDICQLFQYLLNN
ETKEPERQKTITDIQTKLRDIEKLIEKIKASFEQKIDLDKLLEIELREMD
AAIDDAASKITDLLAKAREKDNQTNLEVNGKIVDACTTLMECVKALIQKS
RLLQHEIVASQKGNASANEFYRRNSQWSDGLISASKSVAKAANYLVEAAN
KAIESESGKNFELIVAAQEIAACTTQMVIASKVKAERNSQKLTDLTKASR
SVTQATGTLVATVKDCNSQLEQQSEIELSKLTPSQIKTMEMEIHVKVLEI
EQALQMQRLKLSSFRKEHYKNADY*

LD16566.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:27:57
Subject Length Description Subject Range Query Range Score Percent Strand
Hip1-PA 1124 CG10971-PA 1..1124 1..1124 5630 100 Plus
Hip1-PB 1087 CG10971-PB 1..1087 38..1124 5445 100 Plus
CLIP-190-PN 1598 CG5020-PN 478..1278 310..1112 292 20.4 Plus
CLIP-190-PR 1601 CG5020-PR 481..1281 310..1112 292 20.4 Plus
CLIP-190-PP 1623 CG5020-PP 503..1303 310..1112 292 20.4 Plus
CLIP-190-PN 1598 CG5020-PN 636..1445 324..1080 286 20.7 Plus
CLIP-190-PR 1601 CG5020-PR 639..1448 324..1080 286 20.7 Plus
CLIP-190-PN 1598 CG5020-PN 1016..1519 252..788 188 21.3 Plus
CLIP-190-PR 1601 CG5020-PR 1019..1522 252..788 188 21.3 Plus
CLIP-190-PN 1598 CG5020-PN 284..936 424..1081 178 21.1 Plus
CLIP-190-PR 1601 CG5020-PR 287..939 424..1081 178 21.1 Plus