Clone LD16666 Report

Search the DGRC for LD16666

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:166
Well:66
Vector:pBS SK-
Associated Gene/Transcriptprominin-like-RA
Protein status:LD16666.pep: gold
Sequenced Size:3811

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
prominin-like 2008-04-29 Release 5.5 accounting
prominin-like 2008-04-29 Picked prior to 5.5
prominin-like 2008-08-15 Release 5.9 accounting
prominin-like 2008-12-18 5.12 accounting

Clone Sequence Records

LD16666.complete Sequence

3811 bp assembled on 2007-10-25

GenBank Submission: BT031128

> LD16666.complete
TTTCGATCGGATAAATTTGGAATAGAAAAGGCCACTGACGTGTGAAATGG
GTGTGGGCTACTACACCGAAGGGAACACGATTAAGAGCAGCAGCTCAGCA
CGTTAGTCAGTTTGAGGAAGCTTCACCGAGACAGGAAGTCCTTCGAAAAG
CAGTCGGCCATGGGTGAAGTAGCTGCCACAGTGGAGCCTCTGGCCGCGGT
CAAGTCGAAATCCATGCGATCCCGGAAGAGACGACAGCGTCGTAGGCGAC
AAATAGCCTACCTGGCCATATGTGGATTAAGTGTAGCCATATTCGGCTTC
GCTTTGGCCACGCTGATCCGGCCCACAACCGCCCAGGCTGATGCAGATCC
CGGGAGCTGGCGCAAGGGATATGTGGGCCATGGCACCACGCACGAACAGC
TTGGCCAGCCCCATTGGCCACCAGTCCAGTACACTGTATACCGGCCGACA
ACCAACTACACAAAGGCACCACCACCTCCCACGTCCGCCATGAACCCCAT
TTTCAATTTTACACACTTTCTATATGACAAGGTTCTTTATAGGGATGAAC
CCATTCCGGAGGGTTACATTGTCGTAAAGAATTCGGACACTTTGAGCTTG
GGTCCCAAAGTGGAGGAGAATGACTGGCGGGATCTATTGGCTCATTATTG
GATGGTTCTCATCTGGGTTGTTATTCTCGTGGTGCTCATTATAGTCATAC
CGTTCATTGCCGTTTGCTATTGCTGTTTCTGTTGCTGCCGACGATGTCGA
CAGGGATGTCCTCCGTGTACCAGTAAACAGGATGCTCAGCGGCGCTTCTG
TTGTGGCATCTGTCTGTTGATCCTCATCATCGGACTGATTTTTGGCATCA
TTATCGCCTTTGTTACCAACAAAATGATTGACAGCGGCTTTGCCGAGACT
TCCGAGACAATGAAGCGCGGCAGCGAGGACACTTGCACTTATCTGAAGGA
TGTAGCCGATCACGTTCACCATCTGATGATGTACAACTACGAGGAGATGG
AGACTCATGTGCTTGATCAATTAACCCACGCTCACCGGCACATATTTTTG
GATCTCTCCGACACATCGGAGAGTAATTCCTTGGCAGAAATGGAGCGAGT
TTTGGAGAACATGCCCGAGGCTCTGGAGCTGATGAGGCAAGTGGAGAAGA
TGGAGAAAGATCTGCGCTTCTATGGCTCCCAATTAAGAGATGGCGTCCGT
GGCATTAAACGAGATGTCAACTTTGCAGTGGCCAATCTCTGTCAACTGCA
GATGTGCCAGAAGTTCCTGATTAGCAGCAATATCGAACACATTGATTCCT
CGCAATGCCTGCACTTCGACAACCTCCCGAACACCAAAGAATTTGTAGAG
GGAATGGAGAATATAGTTGCAAGTGAGTATTACGCTATACCTCAACGGGG
ACTCTCGCGTCTAAAGAAGGTTAGCGACAAGGTGAAGACGCAACTCTCCT
TCGTGGTACCACCCATGATGCGGGACTTAACGAAGGGCAGGACAATCTTC
CGAGAACATGCGACGAATGTGCGCAACATTGTGGAGGGAGTACTAAGTGA
TATCCATATAAAAACTCTGCACTCGACTAAGTCATTCGAGGACGTCTACG
AGCGGTTTGGCCATGATAGAAACGTTGTCAGCCTGATTGTGTGCTTGCTT
ATTCTTCTGGTACTTTTTATTTTGATCTTTGCTCTACTGTGCGGTTGCTT
TGGGCGCCGACGAACTGGATATGGTGATGAATGCTGCAGCAAGTCCACCG
GAGCCACCTGCCTGCTTCTAGCCATACTGCTGATATTCTGTGTTTTCTCC
TTCATCGCACTGGTTGGACTTTTCTACTTTATGCTGGGTATGGTAACCTA
CCAGGGTGCCTGTGCACCACTGAGAGATCAGGAGAACAACACATTGTTCC
GGCAACTGGACGCGTCTATAGATCTGAATCACTATTTGCCGCCATCTGAA
AGTAACAAGGAAGTGGTGCAACCACTAAAAATGTCGAGTGCAATCAAGGC
TTGCCACGCCAATCAGACCATTTTCGATATGATGCGTCAGCATAACATAT
ATGACATCAACGATCTGACGCGCATAAAAGTGATGTCACACTCACAGGAA
AATACAGATTCGATTAAGGTCTTCGACGAGGACCTGTCCACCGTGGTACT
CCTGACGAAGGAAGAACGTGACGAGTTAAAGACAGCGGGCGAGAGCAAGC
TTGCGAAGTACCATAGCTCCCTGTACATGCCAAGTCTGTGCACCCAGTTT
ACGCCCATGAACCTGAACGCCCTGTCCGAGCAGCTGTATAAGCTATCCAA
CGATCTGGAGTATCCGGCATACGGCTGGGCCAAGGTGTCATTCTGGAATG
AGGGCCTCAACACCAAGGCCTTCTATCGCAATTTTGTACCGAAGCTTACG
AGCCTCGTAGAGAAGATGAAGGCCAATCTAAAGAAGATCGACGAGTTAAT
TTCGTACGAGAACCACGACTTTACCAATACAATCAAAATTCTCACTGCCA
CGGCCATCAACTCCGAACAGTTCATCCAAACACGCGGCAAGGACTATATC
AACGCCCTAGGAGGCAATCTGACGAATTCCATTGACCAGATGATCGACGA
CTACATAGATATGATTATAAAGGAGGCCAACGAAAGTGTGGGTCATTGTG
CACCCCTGTCGTACATATATTATCGTGGAGTCGATTTGATTTGCCACCGT
ATCGTGGATCCCATCAATGGATTCTGGGTAGGCATACTGCTGTGCGCCCT
GCTCTTCCTGCCCATCCTGTTCGTGGCCCACCGCCTGATGTGCCTCTACA
AGAAAATCTATCCTTACCTGGCTACCGTAGGAGCCGCTGGAGTGGTCGAG
GGCGGAAGCGATTATCTGTACGATGCTTATAGTGAACGAGATCGTGAACA
TGTACCATTGGCTAACGTTCCCAAGAAGCGTCGCAAGGCCTACGAGCGGC
GACGGGAGCAGCAGGATTACTTCGAGGACGCCTCGCCCAGCGTTTCGCGT
GGCAATCGCTCTGGCGGAGATCGTGGTGGCGGCGGAGGTGATGGAGCTCC
TGGCAGCAGCAGCATGCGTTACAACGACATGGCGCCAACGCATTGGGACC
ACGAGCCACCACGATACCACAATCCCCCAGCTGCGCCGCCATCATCGGAG
TACGAGCGTCCGCCGCCCTACTACTATCCGGGTGCCTCCGAGCAGGATTA
GACGGACGGAGGCGGTTTGTTTGAGAGGTGGCAACATGGATGATTTTATT
TTGAACCCACACGCCCACGGCCCCCTTTTTCCATATATGTACCCCCTACT
GAGACTGTACTTTTAGTTAAAGGCCTATACAAAAAAATAACTGAAATTAT
ATAATTTAATTAAGTAGTATCGTAGCATCACGTGTGTTATCACTTTGGCC
CGGCCAGGAGATCTGCCATTGACCTGGAAGCTGGAGAATAACGAACGCAT
AGTTAATATTAAGTGCGGGCCGAAGCAAGAAAGCAAATACGAAAATTCTC
AAACACCCATTTATAGTTACTTTAAAAAATGTTGCCAAAAGACGAGCACG
ATGTCACGGACGAATCCGGCGGGAATTGTCCCAGCCGAAGCATTTAATGA
ACCCTGGAGTACGGAGACTCTGGGCTAGAAGGGCCGAGCGGCAGGCGTCG
GATCTGATGAGTCCCTTGAAGAAGTTGGCCATTCGCCGGGTCGCACGGCC
GCAGAAGCTTTAAGGAATCTCATAATTTTATTATGCACACACTCAGAGCA
GGCGAGACATACCCAAAAAGGAAAACAAAACATAATAAAAAAAAAAAAAA
AAAAAAAAAAA

LD16666.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:34:43
Subject Length Description Subject Range Query Range Score Percent Strand
prominin-like-RC 4016 prominin-like-RC 81..3880 1..3800 18940 99.8 Plus
prominin-like.a 4991 prominin-like.a 347..4117 30..3800 18795 99.8 Plus
prominin-like-RB 4146 prominin-like-RB 347..4117 30..3800 18795 99.8 Plus
prominin-like.a 4991 prominin-like.a 159..188 1..30 150 100 Plus
prominin-like-RB 4146 prominin-like-RB 159..188 1..30 150 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:22:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 3117486..3118430 2714..1770 4545 98.7 Minus
chr3L 24539361 chr3L 3114746..3115442 3786..3090 3455 99.7 Minus
chr3L 24539361 chr3L 3120115..3120650 564..29 2665 99.8 Minus
chr3L 24539361 chr3L 3118661..3118999 1662..1324 1650 99.1 Minus
chr3L 24539361 chr3L 3119476..3119663 1027..840 940 100 Minus
chr3L 24539361 chr3L 3116515..3116689 3090..2916 860 99.4 Minus
chr3L 24539361 chr3L 3119249..3119414 1193..1028 815 99.4 Minus
chr3L 24539361 chr3L 3119908..3120056 710..562 745 100 Minus
chr3L 24539361 chr3L 3117285..3117424 2855..2716 700 100 Minus
chr3L 24539361 chr3L 3119721..3119849 839..711 645 100 Minus
chr3L 24539361 chr3L 3119055..3119186 1323..1192 615 97.7 Minus
chr3L 24539361 chr3L 3118494..3118604 1769..1659 540 99.1 Minus
chr3L 24539361 chr3L 3116779..3116839 2915..2855 305 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:04:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:22:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3118034..3118979 2715..1770 4730 100 Minus
3L 28110227 3L 3115321..3116031 3800..3090 3495 99.4 Minus
3L 28110227 3L 3120666..3121201 564..29 2680 100 Minus
3L 28110227 3L 3119210..3119548 1662..1324 1695 100 Minus
3L 28110227 3L 3120027..3120214 1027..840 940 100 Minus
3L 28110227 3L 3117082..3117256 3090..2916 875 100 Minus
3L 28110227 3L 3119798..3119963 1193..1028 830 100 Minus
3L 28110227 3L 3120459..3120607 710..562 745 100 Minus
3L 28110227 3L 3117834..3117973 2855..2716 700 100 Minus
3L 28110227 3L 3119604..3119735 1323..1192 660 100 Minus
3L 28110227 3L 3120272..3120400 839..711 645 100 Minus
3L 28110227 3L 3119043..3119153 1769..1659 555 100 Minus
3L 28110227 3L 3117346..3117406 2915..2855 305 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:31:16
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 3118034..3118979 2715..1770 4730 100 Minus
3L 28103327 3L 3115321..3116031 3800..3090 3495 99.4 Minus
3L 28103327 3L 3120666..3121201 564..29 2680 100 Minus
3L 28103327 3L 3119210..3119548 1662..1324 1695 100 Minus
3L 28103327 3L 3120027..3120214 1027..840 940 100 Minus
3L 28103327 3L 3117082..3117256 3090..2916 875 100 Minus
3L 28103327 3L 3119798..3119963 1193..1028 830 100 Minus
3L 28103327 3L 3120459..3120607 710..562 745 100 Minus
3L 28103327 3L 3117834..3117973 2855..2716 700 100 Minus
3L 28103327 3L 3119604..3119735 1323..1192 660 100 Minus
3L 28103327 3L 3120272..3120400 839..711 645 100 Minus
3L 28103327 3L 3119043..3119153 1769..1659 555 100 Minus
3L 28103327 3L 3117346..3117406 2915..2855 305 100 Minus
3L 28103327 3L 3127652..3127682 31..1 155 100 Minus
Blast to na_te.dros performed on 2019-03-16 11:22:06 has no hits.

LD16666.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:22:57 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 3116779..3116838 2856..2915 100 <- Minus
chr3L 3117285..3117424 2716..2855 100 <- Minus
chr3L 3114746..3115442 3090..3786 99 <- Minus
chr3L 3116516..3116689 2916..3089 99 <- Minus
chr3L 3117485..3118430 1770..2715 98 <- Minus
chr3L 3118494..3118603 1660..1769 99 <- Minus
chr3L 3118664..3118999 1324..1659 99 <- Minus
chr3L 3119055..3119185 1193..1323 97 <- Minus
chr3L 3119250..3119414 1028..1192 99 <- Minus
chr3L 3119476..3119663 840..1027 100 <- Minus
chr3L 3119721..3119849 711..839 100 <- Minus
chr3L 3119908..3120055 563..710 100 <- Minus
chr3L 3120117..3120648 31..562 99 <- Minus
chr3L 3127101..3127130 1..30 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:46:32 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
prominin-like-RA 1..3042 160..3201 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:04:15 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
prominin-like-RA 1..3042 160..3201 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:45:57 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
prominin-like-RC 1..3042 160..3201 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:50:13 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
prominin-like-RA 1..3042 160..3201 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:14:23 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
prominin-like-RC 1..3042 160..3201 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:46:31 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
prominin-like-RC 42..3827 1..3786 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:04:15 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
prominin-like-RC 42..3827 1..3786 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:45:57 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
prominin-like-RC 43..3828 1..3786 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:50:13 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
prominin-like-RC 42..3827 1..3786 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:14:23 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
prominin-like-RC 43..3828 1..3786 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:22:57 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3115335..3116031 3090..3786 100 <- Minus
3L 3117083..3117256 2916..3089 100 <- Minus
3L 3117346..3117405 2856..2915 100 <- Minus
3L 3117834..3117973 2716..2855 100 <- Minus
3L 3118034..3118979 1770..2715 100 <- Minus
3L 3119043..3119152 1660..1769 100 <- Minus
3L 3119213..3119548 1324..1659 100 <- Minus
3L 3119604..3119734 1193..1323 100 <- Minus
3L 3119799..3119963 1028..1192 100 <- Minus
3L 3120027..3120214 840..1027 100 <- Minus
3L 3120272..3120400 711..839 100 <- Minus
3L 3120459..3120606 563..710 100 <- Minus
3L 3120668..3121199 31..562 100 <- Minus
3L 3127653..3127682 1..30 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:22:57 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3115335..3116031 3090..3786 100 <- Minus
3L 3117083..3117256 2916..3089 100 <- Minus
3L 3117346..3117405 2856..2915 100 <- Minus
3L 3117834..3117973 2716..2855 100 <- Minus
3L 3118034..3118979 1770..2715 100 <- Minus
3L 3119043..3119152 1660..1769 100 <- Minus
3L 3119213..3119548 1324..1659 100 <- Minus
3L 3119604..3119734 1193..1323 100 <- Minus
3L 3119799..3119963 1028..1192 100 <- Minus
3L 3120027..3120214 840..1027 100 <- Minus
3L 3120272..3120400 711..839 100 <- Minus
3L 3120459..3120606 563..710 100 <- Minus
3L 3120668..3121199 31..562 100 <- Minus
3L 3127653..3127682 1..30 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:22:57 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3115335..3116031 3090..3786 100 <- Minus
3L 3117083..3117256 2916..3089 100 <- Minus
3L 3117346..3117405 2856..2915 100 <- Minus
3L 3117834..3117973 2716..2855 100 <- Minus
3L 3118034..3118979 1770..2715 100 <- Minus
3L 3119043..3119152 1660..1769 100 <- Minus
3L 3119213..3119548 1324..1659 100 <- Minus
3L 3119604..3119734 1193..1323 100 <- Minus
3L 3119799..3119963 1028..1192 100 <- Minus
3L 3120027..3120214 840..1027 100 <- Minus
3L 3120272..3120400 711..839 100 <- Minus
3L 3120459..3120606 563..710 100 <- Minus
3L 3120668..3121199 31..562 100 <- Minus
3L 3127653..3127682 1..30 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:45:57 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3120272..3120400 711..839 100 <- Minus
arm_3L 3120459..3120606 563..710 100 <- Minus
arm_3L 3115335..3116031 3090..3786 100 <- Minus
arm_3L 3117083..3117256 2916..3089 100 <- Minus
arm_3L 3117346..3117405 2856..2915 100 <- Minus
arm_3L 3117834..3117973 2716..2855 100 <- Minus
arm_3L 3118034..3118979 1770..2715 100 <- Minus
arm_3L 3119043..3119152 1660..1769 100 <- Minus
arm_3L 3119213..3119548 1324..1659 100 <- Minus
arm_3L 3119604..3119734 1193..1323 100 <- Minus
arm_3L 3119799..3119963 1028..1192 100 <- Minus
arm_3L 3120027..3120214 840..1027 100 <- Minus
arm_3L 3120668..3121199 31..562 100 <- Minus
arm_3L 3127653..3127682 1..30 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:56:20 Download gff for LD16666.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3120459..3120606 563..710 100 <- Minus
3L 3120272..3120400 711..839 100 <- Minus
3L 3120668..3121199 31..562 100 <- Minus
3L 3115335..3116031 3090..3786 100 <- Minus
3L 3117083..3117256 2916..3089 100 <- Minus
3L 3117346..3117405 2856..2915 100 <- Minus
3L 3117834..3117973 2716..2855 100 <- Minus
3L 3118034..3118979 1770..2715 100 <- Minus
3L 3119043..3119152 1660..1769 100 <- Minus
3L 3119213..3119548 1324..1659 100 <- Minus
3L 3119604..3119734 1193..1323 100 <- Minus
3L 3119799..3119963 1028..1192 100 <- Minus
3L 3120027..3120214 840..1027 100 <- Minus
3L 3127653..3127682 1..30 100   Minus

LD16666.pep Sequence

Translation from 159 to 3200

> LD16666.pep
MGEVAATVEPLAAVKSKSMRSRKRRQRRRRQIAYLAICGLSVAIFGFALA
TLIRPTTAQADADPGSWRKGYVGHGTTHEQLGQPHWPPVQYTVYRPTTNY
TKAPPPPTSAMNPIFNFTHFLYDKVLYRDEPIPEGYIVVKNSDTLSLGPK
VEENDWRDLLAHYWMVLIWVVILVVLIIVIPFIAVCYCCFCCCRRCRQGC
PPCTSKQDAQRRFCCGICLLILIIGLIFGIIIAFVTNKMIDSGFAETSET
MKRGSEDTCTYLKDVADHVHHLMMYNYEEMETHVLDQLTHAHRHIFLDLS
DTSESNSLAEMERVLENMPEALELMRQVEKMEKDLRFYGSQLRDGVRGIK
RDVNFAVANLCQLQMCQKFLISSNIEHIDSSQCLHFDNLPNTKEFVEGME
NIVASEYYAIPQRGLSRLKKVSDKVKTQLSFVVPPMMRDLTKGRTIFREH
ATNVRNIVEGVLSDIHIKTLHSTKSFEDVYERFGHDRNVVSLIVCLLILL
VLFILIFALLCGCFGRRRTGYGDECCSKSTGATCLLLAILLIFCVFSFIA
LVGLFYFMLGMVTYQGACAPLRDQENNTLFRQLDASIDLNHYLPPSESNK
EVVQPLKMSSAIKACHANQTIFDMMRQHNIYDINDLTRIKVMSHSQENTD
SIKVFDEDLSTVVLLTKEERDELKTAGESKLAKYHSSLYMPSLCTQFTPM
NLNALSEQLYKLSNDLEYPAYGWAKVSFWNEGLNTKAFYRNFVPKLTSLV
EKMKANLKKIDELISYENHDFTNTIKILTATAINSEQFIQTRGKDYINAL
GGNLTNSIDQMIDDYIDMIIKEANESVGHCAPLSYIYYRGVDLICHRIVD
PINGFWVGILLCALLFLPILFVAHRLMCLYKKIYPYLATVGAAGVVEGGS
DYLYDAYSERDREHVPLANVPKKRRKAYERRREQQDYFEDASPSVSRGNR
SGGDRGGGGGDGAPGSSSMRYNDMAPTHWDHEPPRYHNPPAAPPSSEYER
PPPYYYPGASEQD*

LD16666.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:40:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10222-PA 1014 GF10222-PA 4..1014 2..1013 3557 72.7 Plus
Dana\GF19588-PA 390 GF19588-PA 11..378 511..885 835 43.4 Plus
Dana\GF10223-PA 800 GF10223-PA 3..739 110..878 447 23.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:40:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14481-PA 1012 GG14481-PA 1..1012 1..1013 4569 95.2 Plus
Dere\GG14482-PA 863 GG14482-PA 24..602 252..856 314 21.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:40:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15675-PA 1010 GH15675-PA 4..1010 6..1013 2521 53 Plus
Dgri\GH11388-PA 973 GH11388-PA 15..889 15..903 1562 38.1 Plus
Dgri\GH15674-PA 563 GH15674-PA 28..509 47..545 1211 50 Plus
Dgri\GH15677-PA 1583 GH15677-PA 53..657 267..867 1210 38.4 Plus
Dgri\GH13117-PA 471 GH13117-PA 33..411 512..899 697 38.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:16:41
Subject Length Description Subject Range Query Range Score Percent Strand
prominin-like-PE 1013 CG7740-PE 1..1013 1..1013 5373 100 Plus
prominin-like-PA 1013 CG7740-PA 1..1013 1..1013 5373 100 Plus
prominin-like-PC 1013 CG7740-PC 1..1013 1..1013 5373 100 Plus
prominin-like-PB 1013 CG7740-PB 1..1013 1..1013 5373 100 Plus
prominin-like-PG 993 CG7740-PG 1..993 1..1013 5234 98 Plus
prominin-like-PD 993 CG7740-PD 1..993 1..1013 5234 98 Plus
prominin-like-PF 899 CG7740-PF 1..899 1..899 4733 100 Plus
CG45067-PB 881 CG45067-PB 65..826 110..889 584 23 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:40:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12721-PA 992 GI12721-PA 16..992 23..1013 2518 53.2 Plus
Dmoj\GI12719-PA 779 GI12719-PA 19..669 229..886 1604 45.2 Plus
Dmoj\GI17429-PA 824 GI17429-PA 17..794 87..900 1094 32.6 Plus
Dmoj\GI12722-PA 1630 GI12722-PA 67..638 334..867 984 36.6 Plus
Dmoj\GI12720-PA 352 GI12720-PA 58..352 231..537 657 40.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:40:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20754-PA 990 GL20754-PA 8..972 9..952 3222 63 Plus
Dper\GL20753-PA 915 GL20753-PA 80..914 64..898 2026 48.3 Plus
Dper\GL10170-PA 908 GL10170-PA 30..852 67..893 1904 46.1 Plus
Dper\GL11454-PA 917 GL11454-PA 52..855 61..885 1867 45.9 Plus
Dper\GL10700-PA 968 GL10700-PA 32..899 20..885 1782 43.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:40:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20556-PA 1037 GA20556-PA 8..1037 9..1013 3397 64.8 Plus
Dpse\GA24426-PA 969 GA24426-PA 62..920 58..901 2107 49.2 Plus
Dpse\GA28308-PA 1015 GA28308-PA 80..991 64..968 2022 45.8 Plus
Dpse\GA24105-PA 908 GA24105-PA 30..852 67..893 1867 46.1 Plus
Dpse\GA24451-PA 972 GA24451-PA 32..903 20..885 1788 43.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:40:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14085-PA 1013 GM14085-PA 1..1013 1..1013 5430 98.2 Plus
Dsec\GM14086-PA 941 GM14086-PA 10..679 129..856 349 22.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:40:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13357-PA 1086 GD13357-PA 1..899 1..899 4745 97.6 Plus
Dsim\GD13357-PA 1086 GD13357-PA 973..1086 900..1013 654 100 Plus
Dsim\GD13358-PA 977 GD13358-PA 66..715 113..856 298 22 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:40:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12708-PA 992 GJ12708-PA 10..992 23..1013 2666 54.8 Plus
Dvir\GJ12707-PA 1230 GJ12707-PA 8..861 28..886 2009 47.2 Plus
Dvir\GJ18376-PA 906 GJ18376-PA 9..855 16..896 1309 37 Plus
Dvir\GJ12709-PA 1609 GJ12709-PA 126..633 345..852 1092 42 Plus
Dvir\GJ12707-PA 1230 GJ12707-PA 876..1188 538..852 685 42.8 Plus
Dvir\GJ17781-PA 1485 GJ17781-PA 12..288 67..345 585 39.8 Plus
Dvir\GJ12709-PA 1609 GJ12709-PA 10..139 23..148 207 33.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:40:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12310-PA 1052 GK12310-PA 1..1052 1..1013 3384 66.2 Plus
Dwil\GK17624-PA 997 GK17624-PA 8..922 12..899 2340 49.6 Plus
Dwil\GK12666-PA 962 GK12666-PA 2..883 14..899 2169 50.2 Plus
Dwil\GK12311-PA 746 GK12311-PA 6..676 132..883 271 20 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:40:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21669-PA 1013 GE21669-PA 1..1013 1..1013 4579 95.4 Plus
Dyak\GE21670-PA 1064 GE21670-PA 31..760 113..899 393 22.5 Plus

LD16666.hyp Sequence

Translation from 159 to 3200

> LD16666.hyp
MGEVAATVEPLAAVKSKSMRSRKRRQRRRRQIAYLAICGLSVAIFGFALA
TLIRPTTAQADADPGSWRKGYVGHGTTHEQLGQPHWPPVQYTVYRPTTNY
TKAPPPPTSAMNPIFNFTHFLYDKVLYRDEPIPEGYIVVKNSDTLSLGPK
VEENDWRDLLAHYWMVLIWVVILVVLIIVIPFIAVCYCCFCCCRRCRQGC
PPCTSKQDAQRRFCCGICLLILIIGLIFGIIIAFVTNKMIDSGFAETSET
MKRGSEDTCTYLKDVADHVHHLMMYNYEEMETHVLDQLTHAHRHIFLDLS
DTSESNSLAEMERVLENMPEALELMRQVEKMEKDLRFYGSQLRDGVRGIK
RDVNFAVANLCQLQMCQKFLISSNIEHIDSSQCLHFDNLPNTKEFVEGME
NIVASEYYAIPQRGLSRLKKVSDKVKTQLSFVVPPMMRDLTKGRTIFREH
ATNVRNIVEGVLSDIHIKTLHSTKSFEDVYERFGHDRNVVSLIVCLLILL
VLFILIFALLCGCFGRRRTGYGDECCSKSTGATCLLLAILLIFCVFSFIA
LVGLFYFMLGMVTYQGACAPLRDQENNTLFRQLDASIDLNHYLPPSESNK
EVVQPLKMSSAIKACHANQTIFDMMRQHNIYDINDLTRIKVMSHSQENTD
SIKVFDEDLSTVVLLTKEERDELKTAGESKLAKYHSSLYMPSLCTQFTPM
NLNALSEQLYKLSNDLEYPAYGWAKVSFWNEGLNTKAFYRNFVPKLTSLV
EKMKANLKKIDELISYENHDFTNTIKILTATAINSEQFIQTRGKDYINAL
GGNLTNSIDQMIDDYIDMIIKEANESVGHCAPLSYIYYRGVDLICHRIVD
PINGFWVGILLCALLFLPILFVAHRLMCLYKKIYPYLATVGAAGVVEGGS
DYLYDAYSERDREHVPLANVPKKRRKAYERRREQQDYFEDASPSVSRGNR
SGGDRGGGGGDGAPGSSSMRYNDMAPTHWDHEPPRYHNPPAAPPSSEYER
PPPYYYPGASEQD*

LD16666.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:02:55
Subject Length Description Subject Range Query Range Score Percent Strand
prominin-like-PE 1013 CG7740-PE 1..1013 1..1013 5373 100 Plus
prominin-like-PA 1013 CG7740-PA 1..1013 1..1013 5373 100 Plus
prominin-like-PC 1013 CG7740-PC 1..1013 1..1013 5373 100 Plus
prominin-like-PB 1013 CG7740-PB 1..1013 1..1013 5373 100 Plus
prominin-like-PG 993 CG7740-PG 1..993 1..1013 5234 98 Plus