BDGP Sequence Production Resources |
Search the DGRC for LD16826
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 168 |
Well: | 26 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG8569-RA |
Protein status: | LD16826.pep: gold |
Preliminary Size: | 2353 |
Sequenced Size: | 2369 |
Gene | Date | Evidence |
---|---|---|
CG8569 | 2001-10-10 | Blastp of sequenced clone |
CG8569 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8569 | 2008-04-29 | Release 5.5 accounting |
CG8569 | 2008-08-15 | Release 5.9 accounting |
CG8569 | 2008-12-18 | 5.12 accounting |
2369 bp (2369 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061228
> LD16826.complete TTCACCCAATCCAGCAGTCCGGCAACGCTTCCAGTTAGCCAAAAATTGAT TTCATTTGCAAGAAAACTTTAAAACGCAAATGAAATGGCCAGCGATATTC CACCTTCAGCCATCCGTATTTGGATGGACAAGCTGAAAAAGGGCGTTGGG CAGCCGGCGACAGTCCTAGAGCGTTCCCTGCTCAATTTAATGAGTGCAGA AGCAGCCAGTTTATCGGTGAAAAATGCCACGGAGCGAGGCATACTGGTGG CCAGAGCAGGCGGCGGACGGTCCAAGCGTCTGGCCCTCGCCTTTTGTCAA AAAGTAAGCCGGCTGCCCAGCTCACCAATTGATCCGTTCTGCTTCGAGTG CCATTTGCCCGGAGCCGTTAAGAAATGCATATCCTGCCATCGCTCCTTCC ACGAGAATTGCCAGCGACAGGACCCGGAGAAGCCCAATTATTCAGTGCCC TCGGACAAGGGCCAACCTTACCAGTTTCCCGTCAACGAATTGGACAATCA GCCCCTGAATAACACTCAGAACTTGGAGACTCCCCAAACGCCAACGCCCC TGCTCGATCATAATAGCAACATCAATCAGACTTTGCTAGCCACTACGGAT TTCCTGAAGCACGAGAACATCGAGTGGGACGACGACGTCTTCTTTGTGTG CGAACAAAAGGGCGCGCGCCAGCGAAAGCTGCCCAGGATCAAGGACGAAC TACAAAGCAGTTTGGATAGCGATGAGGGAAGCGATCTGGAGCGCTGCACC CACTGCCGTTTGCTCGCCCTGGCCGCTCTCCACAACCCACCGCAACTCGA CAAGCAAGAGCTGGGCTGCCTATTGAAGTACTCCTGGGACCAGCATCACT CCTGGATCTCCATGGATGTGGCCAAGTACATGGCCAAGCATTGGAACGAA CGCGACAAGGCGCTGGTTAAGCGGCTACTCTTCAAGACAAAGATTTTGGG TCTGGGCGACATCGAGCGCAACATAGCGGCGGCGAAGTATACGTACCTAA CAGAATTCCTAATGGATCTGCTCGATCTGCAGCACAACATGGCCGTGTTC TTTGGGCAAAAGAGCGTTGAGTACAATGCCACCAAGTGGCTGATGAGAGA TGTGACGCACGACATTCGCGAAATCCGTCGTTGCCCCGACTGCTATAGGT ATTCCAACGAGGCCAGCCTGTCGGATCTCTGGTTCGCCAAGCCATGTCTT CAGCGGCACGAGTTGGTATTTGCCAAGCAGGTGGGCTCACCACCGTGGCC TGCAAAGGTGATGAGCGTCTCCAAGCGTCAGCCCATCAAGTACGACGTCC GCTTCTTCGGTGGCACTCATTCCCGGGCCCTCATCTCAGAACGTGATATT ACACCCATCGAGTCGGACATTCAGTCGCATATCAAACCACGGAACTCCCG AGCTCTGAGCGCTGCGATAAAAGAACTGCAGTGTCACATGATGTTGTCCC ACTATTCCGCCTCGCTATTCGGCTTCCATGCAGATCCCACCGTTGCCGAG AATCTCATTAAGGTGGCTCTATCCCACTGCACGGAGTCAACGGAAACGAG TGCGTCCGGCAAACGAGGACGCCCGCCGACTCCAGCCACTCCCGGCGCTG CAAAGAATCGACGGCTTAATAACACCACTTCGAATACCTCATCGCCGGTG CCCATTCGTGGGATTCCTGACTCCGTAGCATATGATAGTCTAACCGCCGA AATACTGCAGGCGCATAACGATCTGCTAAATTGCCGAAGAGAGCTCTCGG CCACGCAAAGGAAGCTGGCCGAAGTGAAAAGGAAGCAATGGTGCTACCAT TGCCTGGATGAGGCCGTTTTTAACTGCTGCTTTACTGCGTCCTACTGCAG CGTTGAATGCCAGCGACGTGATAAGAGACGCCACCAAGCATCCTGCAAAG TTACTCATTAAATTAGGACTACAGACGAAATTGGAAACTATGTCCAAAGT GATAACATCTCGTTTGTTACCATCCTTTTGTATCAAATGTATCCGTTCTT AAGATATGCATCAATATTTTCAGAAGATAAAGAATGTTAAACTTGTATTA ATGAAAAATATTATCAATGAGATATTTGAAAATGGCGCCTTTTCCGTTCT TATGATGGGCAGCACTGTTTCCGCTAGGTGTCGCCACCTGATCATATTAA TCCATATTCATATTACGTTTATAAAAAATCAGAAAAAACGTACAATACTT TAAAAGTGTGGGCGTGGAACTTACTTGTACTTGTTACTAACAATATAAAA ACTTGTTTCCTACCAAAAAATATATACATATTTTATAAGAATGGGTATTA TTTCGTGCCAGCTGTATTCATAATAATAAACACAAATTATTGTTCATCCA CAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8569-RA | 2460 | CG8569-RA | 108..2460 | 1..2353 | 11765 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 8407858..8408953 | 1256..2351 | 5450 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 8406739..8407801 | 197..1259 | 5255 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 8406478..8406676 | 1..199 | 995 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12520529..12521626 | 1256..2353 | 5490 | 100 | Plus |
2R | 25286936 | 2R | 12519410..12520472 | 197..1259 | 5315 | 100 | Plus |
2R | 25286936 | 2R | 12519149..12519347 | 1..199 | 995 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12521728..12522825 | 1256..2353 | 5490 | 100 | Plus |
2R | 25260384 | 2R | 12520609..12521671 | 197..1259 | 5315 | 100 | Plus |
2R | 25260384 | 2R | 12520348..12520546 | 1..199 | 995 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
INE-1 | 611 | INE-1 INE1 611bp Derived from U66884 (e1371475) (Rel. 52, Last updated, Version 6). | 247..436 | 2222..2027 | 120 | 57.4 | Minus |
gypsy2 | 6841 | gypsy2 GYPSY2 6841bp | 3719..3767 | 1500..1548 | 119 | 71.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8406742..8407799 | 200..1257 | 99 | -> | Plus |
chr2R | 8406478..8406676 | 1..199 | 100 | -> | Plus |
chr2R | 8407860..8408953 | 1258..2351 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8569-RA | 1..1827 | 85..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8569-RA | 1..1827 | 85..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8569-RA | 1..1827 | 85..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8569-RA | 1..1827 | 85..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8569-RA | 1..1827 | 85..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8569-RA | 1..2351 | 1..2351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8569-RA | 1..2351 | 1..2351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8569-RA | 1..2334 | 18..2351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8569-RA | 1..2351 | 1..2351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8569-RA | 1..2334 | 18..2351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12519149..12519347 | 1..199 | 100 | -> | Plus |
2R | 12519413..12520470 | 200..1257 | 100 | -> | Plus |
2R | 12520531..12521624 | 1258..2351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12519149..12519347 | 1..199 | 100 | -> | Plus |
2R | 12519413..12520470 | 200..1257 | 100 | -> | Plus |
2R | 12520531..12521624 | 1258..2351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12519149..12519347 | 1..199 | 100 | -> | Plus |
2R | 12519413..12520470 | 200..1257 | 100 | -> | Plus |
2R | 12520531..12521624 | 1258..2351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8406654..8406852 | 1..199 | 100 | -> | Plus |
arm_2R | 8406918..8407975 | 200..1257 | 100 | -> | Plus |
arm_2R | 8408036..8409129 | 1258..2351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12520612..12521669 | 200..1257 | 100 | -> | Plus |
2R | 12521730..12522823 | 1258..2351 | 100 | Plus | |
2R | 12520348..12520546 | 1..199 | 100 | -> | Plus |
Translation from 84 to 1910
> LD16826.pep MASDIPPSAIRIWMDKLKKGVGQPATVLERSLLNLMSAEAASLSVKNATE RGILVARAGGGRSKRLALAFCQKVSRLPSSPIDPFCFECHLPGAVKKCIS CHRSFHENCQRQDPEKPNYSVPSDKGQPYQFPVNELDNQPLNNTQNLETP QTPTPLLDHNSNINQTLLATTDFLKHENIEWDDDVFFVCEQKGARQRKLP RIKDELQSSLDSDEGSDLERCTHCRLLALAALHNPPQLDKQELGCLLKYS WDQHHSWISMDVAKYMAKHWNERDKALVKRLLFKTKILGLGDIERNIAAA KYTYLTEFLMDLLDLQHNMAVFFGQKSVEYNATKWLMRDVTHDIREIRRC PDCYRYSNEASLSDLWFAKPCLQRHELVFAKQVGSPPWPAKVMSVSKRQP IKYDVRFFGGTHSRALISERDITPIESDIQSHIKPRNSRALSAAIKELQC HMMLSHYSASLFGFHADPTVAENLIKVALSHCTESTETSASGKRGRPPTP ATPGAAKNRRLNNTTSNTSSPVPIRGIPDSVAYDSLTAEILQAHNDLLNC RRELSATQRKLAEVKRKQWCYHCLDEAVFNCCFTASYCSVECQRRDKRRH QASCKVTH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13391-PA | 621 | GF13391-PA | 1..619 | 1..606 | 2255 | 67 | Plus |
Dana\GF22978-PA | 1684 | GF22978-PA | 437..616 | 275..468 | 191 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20313-PA | 606 | GG20313-PA | 1..606 | 1..608 | 2953 | 89.5 | Plus |
Dere\GG11823-PA | 1667 | GG11823-PA | 456..606 | 297..452 | 190 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22740-PA | 654 | GH22740-PA | 1..648 | 1..604 | 1192 | 42.1 | Plus |
Dgri\GH18646-PA | 1867 | GH18646-PA | 489..643 | 307..468 | 177 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8569-PA | 608 | CG8569-PA | 1..608 | 1..608 | 3243 | 100 | Plus |
CG1815-PB | 1121 | CG1815-PB | 459..618 | 302..468 | 192 | 31 | Plus |
CG1815-PC | 1664 | CG1815-PC | 459..618 | 302..468 | 192 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18524-PA | 644 | GI18524-PA | 1..640 | 1..606 | 1569 | 50.4 | Plus |
Dmoj\GI23125-PA | 1727 | GI23125-PA | 466..620 | 307..468 | 189 | 32.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17091-PA | 618 | GL17091-PA | 6..616 | 5..606 | 1627 | 52.3 | Plus |
Dper\GL12873-PA | 144 | GL12873-PA | 50..125 | 244..323 | 193 | 51.2 | Plus |
Dper\GL23991-PA | 1773 | GL23991-PA | 465..642 | 283..468 | 168 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21171-PA | 616 | GA21171-PA | 4..614 | 5..606 | 1626 | 52.2 | Plus |
Dpse\GA26472-PA | 1765 | GA26472-PA | 463..640 | 283..468 | 180 | 32.1 | Plus |
Dpse\GA26472-PB | 1343 | GA26472-PB | 463..640 | 283..468 | 180 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21401-PA | 608 | GM21401-PA | 1..608 | 1..608 | 3091 | 93.3 | Plus |
Dsec\GM16440-PA | 1663 | GM16440-PA | 451..613 | 297..464 | 190 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10895-PA | 572 | GD10895-PA | 1..572 | 36..608 | 2927 | 94.2 | Plus |
Dsim\GD21594-PA | 1662 | GD21594-PA | 451..601 | 297..452 | 189 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21388-PA | 616 | GJ21388-PA | 1..612 | 1..606 | 1605 | 53 | Plus |
Dvir\GJ23097-PA | 1737 | GJ23097-PA | 485..630 | 302..452 | 180 | 33.3 | Plus |
Translation from 84 to 1910
> LD16826.hyp MASDIPPSAIRIWMDKLKKGVGQPATVLERSLLNLMSAEAASLSVKNATE RGILVARAGGGRSKRLALAFCQKVSRLPSSPIDPFCFECHLPGAVKKCIS CHRSFHENCQRQDPEKPNYSVPSDKGQPYQFPVNELDNQPLNNTQNLETP QTPTPLLDHNSNINQTLLATTDFLKHENIEWDDDVFFVCEQKGARQRKLP RIKDELQSSLDSDEGSDLERCTHCRLLALAALHNPPQLDKQELGCLLKYS WDQHHSWISMDVAKYMAKHWNERDKALVKRLLFKTKILGLGDIERNIAAA KYTYLTEFLMDLLDLQHNMAVFFGQKSVEYNATKWLMRDVTHDIREIRRC PDCYRYSNEASLSDLWFAKPCLQRHELVFAKQVGSPPWPAKVMSVSKRQP IKYDVRFFGGTHSRALISERDITPIESDIQSHIKPRNSRALSAAIKELQC HMMLSHYSASLFGFHADPTVAENLIKVALSHCTESTETSASGKRGRPPTP ATPGAAKNRRLNNTTSNTSSPVPIRGIPDSVAYDSLTAEILQAHNDLLNC RRELSATQRKLAEVKRKQWCYHCLDEAVFNCCFTASYCSVECQRRDKRRH QASCKVTH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8569-PA | 608 | CG8569-PA | 1..608 | 1..608 | 3243 | 100 | Plus |
CG1815-PB | 1121 | CG1815-PB | 459..618 | 302..468 | 192 | 31 | Plus |
CG1815-PC | 1664 | CG1815-PC | 459..618 | 302..468 | 192 | 31 | Plus |