BDGP Sequence Production Resources |
Search the DGRC for LD17077
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 170 |
Well: | 77 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG3876-RA |
Protein status: | LD17077.pep: gold |
Preliminary Size: | 1478 |
Sequenced Size: | 1356 |
Gene | Date | Evidence |
---|---|---|
CG3876 | 2001-01-01 | Release 2 assignment |
CG3876 | 2002-06-10 | Blastp of sequenced clone |
CG3876 | 2008-04-29 | Release 5.5 accounting |
CG3876 | 2008-08-15 | Release 5.9 accounting |
CG3876 | 2008-12-18 | 5.12 accounting |
1356 bp (1356 high quality bases) assembled on 2002-06-10
GenBank Submission: AY121646
> LD17077.complete TCGCAATGTTTATAACGTAAGCAATCTGCGTGAAAAGCCATTAGTTAATT TGGGAGCGAGGAACTGAAAAATGAGGAGCGAGCGCCGCTGAAGAACCCAA CCCGACCAACACCCCACGTAGTCCACCCACTCCAAAGGTCAAATGCTGCC TACTTACGAGCGCTTCAGTGATCCCAAAAGCGTCCTCTTCCGGCTTCCCT TTGCGCGACTGGCACTGGTGGCTCTTAGTTTGCCCCTGGGAGGCTTCTTC TTCTGCGTGATTTGGTCTCTGACCTTTGACTTCGTTAGGAGCACCTACAC CCACTGCGATGTGACCAACTATCTGCCCTCCGTCTCGGCGGCCATTGGGA ACTATGAGCCCCAAAAAACCGTCTGGAGACTGGCCATATTTCTGCATTTA CCACTCCGTTTGGCAGTTGCCAAAATCTACTTGGAGCACTATCGGGAACA CATCCGCCGGAGCAGAAGATTGCTGGGCATCCTGGCCTGCTTCTTGAACG TCGTGGAGGATCTGGCCCTCTTCTGCTTGTCGTTTTGGACCTCTGCGGAT CATTACGAGACCCACAGAAACGCATTTGTGGTGTTCATTGCGTGTTCCGA GTGCTATATGCTGGTTTCCTACCTGCTGAACAGGAATATACAGAAGACCG TGCTCTTGCCGCACGAGGAGAAGTCGCTGAGGTACAAGAGAAATCTGTTC TTGGTGAATGTGATCGCCTTTGGCTTGGCAGGATACTGCTTCGTGAGGCA CAACTCGCATTGCGAGGCGGGAGTCTATACTTTCTTCGCGTTGTTCGAGT ACATCGTGGTGCTGACCAACATGGGGTTCCACATGACCTCCTACTGGGAC TTCTACGCCCTGAATGTGGTGTGTGATGCCAAGCACGGTCTCTACCTATC ACAATCGTAGACCAATGAACTAGATCAAACCCAGCCTGCGCCGCCATTTC AGCCAGCCAGTCGTCCTCGAGTATTGTGTACATACGCGGTATTAGCTTAA GCTCAATGTTTACTTAATTTTACCAAAAGGAAATTGCTTACGAGGGATTC CGAGAGGAGACGATTCAGTATGACAGGATCTGATGCATACACACGCTTTT AGCTTTAGGCTCTAACACGATTTTACACCTAAAGGATCTAGTTAAATTCG AACCGAGTTCCATCATTATGTAGTGCATTATTTATACACATACTCATTTA GGAACAAGGCTTCAATAAGGTTTTATTTTATACGTACTGAATTTGCTTTT ATTGGCTTCTAATGTTCTAATTCATTATTTTGTAAGTCTAAAATTGTATT TATTAGAATTCAGATAAATTAACTTTTTAATTGCTTCCAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 3889..3966 | 1303..1226 | 111 | 60.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 818575..819347 | 1..773 | 99 | Minus | |
chr2L | 817950..818514 | 774..1338 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3876-RA | 1..768 | 143..910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3876-RA | 1..768 | 143..910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3876-RA | 1..768 | 143..910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3876-RA | 1..768 | 143..910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3876-RA | 1..768 | 143..910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3876-RA | 17..1354 | 1..1338 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3876-RA | 17..1354 | 1..1338 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3876-RA | 33..1370 | 1..1338 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3876-RA | 17..1354 | 1..1338 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3876-RA | 33..1370 | 1..1338 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 818079..818643 | 774..1338 | 100 | <- | Minus |
2L | 818704..819476 | 1..773 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 818079..818643 | 774..1338 | 100 | <- | Minus |
2L | 818704..819476 | 1..773 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 818079..818643 | 774..1338 | 100 | <- | Minus |
2L | 818704..819476 | 1..773 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 818079..818643 | 774..1338 | 100 | <- | Minus |
arm_2L | 818704..819476 | 1..773 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 818079..818643 | 774..1338 | 100 | <- | Minus |
2L | 818704..819476 | 1..773 | 100 | Minus |
Translation from 142 to 909
> LD17077.pep MLPTYERFSDPKSVLFRLPFARLALVALSLPLGGFFFCVIWSLTFDFVRS TYTHCDVTNYLPSVSAAIGNYEPQKTVWRLAIFLHLPLRLAVAKIYLEHY REHIRRSRRLLGILACFLNVVEDLALFCLSFWTSADHYETHRNAFVVFIA CSECYMLVSYLLNRNIQKTVLLPHEEKSLRYKRNLFLVNVIAFGLAGYCF VRHNSHCEAGVYTFFALFEYIVVLTNMGFHMTSYWDFYALNVVCDAKHGL YLSQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14823-PA | 255 | GF14823-PA | 1..254 | 1..254 | 1276 | 93.3 | Plus |
Dana\GF16001-PA | 355 | GF16001-PA | 94..329 | 9..237 | 316 | 31.9 | Plus |
Dana\GF14824-PA | 261 | GF14824-PA | 55..260 | 46..254 | 193 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24627-PA | 255 | GG24627-PA | 1..255 | 1..255 | 1333 | 98 | Plus |
Dere\GG18072-PA | 325 | GG18072-PA | 75..299 | 20..237 | 314 | 33.5 | Plus |
Dere\GG24628-PA | 255 | GG24628-PA | 53..254 | 52..254 | 148 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10495-PA | 255 | GH10495-PA | 1..254 | 1..254 | 1147 | 82.3 | Plus |
Dgri\GH12034-PA | 345 | GH12034-PA | 95..319 | 20..237 | 310 | 32.6 | Plus |
Dgri\GH10496-PA | 217 | GH10496-PA | 23..212 | 16..207 | 189 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PGAP2-PA | 255 | CG3876-PA | 1..255 | 1..255 | 1360 | 100 | Plus |
CG7990-PA | 325 | CG7990-PA | 75..299 | 20..237 | 336 | 33.5 | Plus |
CG15880-PA | 263 | CG15880-PA | 25..262 | 16..254 | 214 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18012-PA | 255 | GI18012-PA | 1..254 | 1..254 | 1083 | 76.8 | Plus |
Dmoj\GI14309-PA | 312 | GI14309-PA | 51..286 | 9..237 | 310 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18632-PA | 255 | GL18632-PA | 1..254 | 1..254 | 1197 | 91.7 | Plus |
Dper\GL13016-PA | 349 | GL13016-PA | 99..323 | 20..237 | 296 | 30.8 | Plus |
Dper\GL18633-PA | 258 | GL18633-PA | 7..257 | 2..254 | 161 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17744-PA | 255 | GA17744-PA | 1..254 | 1..254 | 1197 | 91.7 | Plus |
Dpse\GA25860-PA | 347 | GA25860-PA | 97..321 | 20..237 | 293 | 30.4 | Plus |
Dpse\GA14001-PA | 258 | GA14001-PA | 7..257 | 2..254 | 160 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16642-PA | 255 | GM16642-PA | 1..255 | 1..255 | 1330 | 98.4 | Plus |
Dsec\GM22761-PA | 350 | GM22761-PA | 100..324 | 20..237 | 316 | 33.5 | Plus |
Dsec\GM16644-PA | 262 | GM16644-PA | 32..261 | 23..254 | 186 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22939-PA | 255 | GD22939-PA | 1..255 | 1..255 | 1340 | 99.2 | Plus |
Dsim\GD15597-PA | 325 | GD15597-PA | 75..299 | 20..237 | 316 | 33.5 | Plus |
Dsim\GD22940-PA | 261 | GD22940-PA | 31..260 | 23..254 | 185 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19643-PA | 255 | GJ19643-PA | 1..255 | 1..255 | 1117 | 79.2 | Plus |
Dvir\GJ19365-PA | 341 | GJ19365-PA | 81..315 | 10..237 | 306 | 32.4 | Plus |
Dvir\GJ19646-PA | 253 | GJ19646-PA | 20..253 | 16..255 | 208 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24413-PA | 256 | GK24413-PA | 1..255 | 1..254 | 1084 | 82 | Plus |
Dwil\GK25756-PA | 377 | GK25756-PA | 116..351 | 9..237 | 316 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15909-PA | 255 | GE15909-PA | 1..255 | 1..255 | 1326 | 97.6 | Plus |
Dyak\GE15469-PA | 348 | GE15469-PA | 98..322 | 20..237 | 318 | 33.5 | Plus |
Dyak\GE15920-PA | 263 | GE15920-PA | 25..262 | 16..254 | 188 | 27.9 | Plus |
Translation from 142 to 909
> LD17077.hyp MLPTYERFSDPKSVLFRLPFARLALVALSLPLGGFFFCVIWSLTFDFVRS TYTHCDVTNYLPSVSAAIGNYEPQKTVWRLAIFLHLPLRLAVAKIYLEHY REHIRRSRRLLGILACFLNVVEDLALFCLSFWTSADHYETHRNAFVVFIA CSECYMLVSYLLNRNIQKTVLLPHEEKSLRYKRNLFLVNVIAFGLAGYCF VRHNSHCEAGVYTFFALFEYIVVLTNMGFHMTSYWDFYALNVVCDAKHGL YLSQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3876-PA | 255 | CG3876-PA | 1..255 | 1..255 | 1360 | 100 | Plus |
CG7990-PA | 325 | CG7990-PA | 75..299 | 20..237 | 336 | 33.5 | Plus |
CG15880-PA | 263 | CG15880-PA | 25..262 | 16..254 | 214 | 28.8 | Plus |