BDGP Sequence Production Resources |
Search the DGRC for LD17340
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 173 |
Well: | 40 |
Vector: | pBS SK- |
Associated Gene/Transcript | frj-RA |
Protein status: | LD17340.pep: gold |
Preliminary Size: | 2282 |
Sequenced Size: | 2089 |
Gene | Date | Evidence |
---|---|---|
CG9526 | 2001-01-01 | Release 2 assignment |
CG9526 | 2002-12-11 | Blastp of sequenced clone |
CG9526 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9526 | 2008-04-29 | Release 5.5 accounting |
CG9526 | 2008-08-15 | Release 5.9 accounting |
CG9526 | 2008-12-18 | 5.12 accounting |
2089 bp (2089 high quality bases) assembled on 2002-12-11
GenBank Submission: BT003271
> LD17340.complete GGACTTAAATTGTATCTTTGTTAAATTTATTAGATATAAACAATAAATAA TATCGCGAAAATACCGTTAAGCGATAGGTGACCGTCATAGGAGTGGCAAC ACTGGCTGCACTGCCTCTGCGGAGCGGATAAAACAAATCAAAAATCAATA GCCGGGGGATCGAGTACCCACTGCAGGATGAGCATCGACGACGTCATCTA TGTGATCTGCCTGCTGGGCTGCATCGGAGCCGGCAGCTATGTGAAGAAGA TCGCGGACGAGGGCCAGCGCAAGCTGGTGTCCACTGGGCTAGGCGTTCTT GTGGTTGTCATTGTCTCGGGGCTCCACAGTCTGCACTGCTTTGTTTCCCT GGCACTGGGCACGGCCGCCGTGCTTCTCGTGCACCCGAGCAAGGGTCACC TGGTCACGTTTGCGGTCATGTTTGGCTACCTGGTGTTCTTCCGCATTTTC GACTTCTACTTCGGCATTCCCGGCCACACGAACATGATACAAATGATACT AACACTAAAGGTTTCGGGCATTGCCTTCGAGAAGACTGCCGCCTGGAAGC GACTGCAAGCGCACGACGAGCAAAAGAAGAACGACCAGCGGGATGTGCAC CAGGAGAGTCCAATCGAGATCACCGACTACGATGTGGAATTGCAGAGCCT GAGTGCCGCTGAGATCCTGCACTACAGCTTCAACTACATCGGAGTTCTTA CAGGTCCCTATTATCGGTATCGCACATACAGGGACTACTTTGAGATGCCT TTCAAGACCTACGCTCCAACTGTTGAAGCCACCCTGGAGAAGCTGAAGTA CGCCGTCTTCTACTGCGCATTATACCTGGCAACCAACTACATGTGGCCAC TGGATTATGCGTTGAGTGATGAGTTCTTCAACGATCGCTCCTTTGTGTAC CGTTTGCTGTACGTGTGGCCCACGTTCTTCACATTCCGCGCTCGCATCTA CACCGGACTCACCCTCAGCGAATGTGTCTGCACAATGGCCGGCTTCGGAG CCTATCCGGATGAATCCGATCCCAACAATGGCGAGGGCCCTCGGAAACGC TATCAGCACCTAAAGCGCGACGCCGATAAGCACACCTACAACTTTACAAC GATCGTGAACACCAGGGTTCTGGAGGTGGAAAGATGCTGGACCTTCCGCG AGGGCATGAAGCACTGGAATGTGTGCGTCCAGTATTGGTTGGCTGTCAAT GTGTACAAACTCTTCCCCAGCAAAAAGTACAGGACTGGCGCCACTTTGCT GTGCTCTGCCTACTGGCACGGATTCCGGCCGGGACACTACTTCTGCATCA TGGGCGCTCCCTTCTACGTCTCCCTGGAGGACATGTGGGATAAGCTGGTG CGCAAGAGTGCCACCGGCACCAGCCGCAGGGTAATCGATGTCATCTTCTG GATCTTTAAGTGGTTCGCCTTCAGCTACTTGGGCGAGGCCTTCCTGCTCT CCTCCTTTGGCAACATCTGGCGGTTCTATAGCTCTGTCTATCATATTGGC TACATCAGTTGGGCGGCCATGACTGCGTTAGGCTTTTACCTCACCAGCCA GAGAAAAGCGGCCGAACGTAGAAAGAAGCGCGCGGCAGAGAAAGCAGCTG GTGGCGACGGAATCGCCGCCGCAATAGAGAAGGAGAAGGCGCAGTAGAGT GTCCAGTTTGTTGCTACCAAATGGGTAGTTTCCATTCAAAACACAACTTC CTTTAAGTTTTCCAATAGATATTCTATTAGGGGGAAACCGAAAATTTCTT CCTTGAAATTGTATATTATGATGATCAAACGAATTTCTTCTTAGAGATGT TCTTCTCTACATAAGTCACCATTTTAATTATGTACAAAGTGGTCTTGTTA CGCCTTCTACCCGCTTCCATCCGCACTTCTTCTGGGGAAGGTGATGATAT TGATATGGATAAAATCTAAAATTAGATGCTAAAAAGTTACTAAAGAAATT TTATTATAGATATACATATATTTTAACCAAAGCCTGTGAAATTGGAGTCA AAAGTTATAGAAATATAAAATCCCAATATGATCATTCAATTGAAAACTAT AATATAAAAGGAAATACACTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6457141..6457980 | 1231..2070 | 4170 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 6455266..6455654 | 1..389 | 1945 | 100 | Plus |
chr2L | 23010047 | chr2L | 6456512..6456889 | 856..1233 | 1890 | 100 | Plus |
chr2L | 23010047 | chr2L | 6455891..6456087 | 509..705 | 970 | 99.5 | Plus |
chr2L | 23010047 | chr2L | 6456307..6456461 | 701..855 | 775 | 100 | Plus |
chr2L | 23010047 | chr2L | 6455714..6455838 | 388..512 | 625 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6458169..6459011 | 1231..2073 | 4215 | 100 | Plus |
2L | 23513712 | 2L | 6456294..6456682 | 1..389 | 1945 | 100 | Plus |
2L | 23513712 | 2L | 6457540..6457917 | 856..1233 | 1890 | 100 | Plus |
2L | 23513712 | 2L | 6456919..6457115 | 509..705 | 985 | 100 | Plus |
2L | 23513712 | 2L | 6457335..6457489 | 701..855 | 775 | 100 | Plus |
2L | 23513712 | 2L | 6456742..6456866 | 388..512 | 625 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6458169..6459011 | 1231..2073 | 4215 | 100 | Plus |
2L | 23513712 | 2L | 6456294..6456682 | 1..389 | 1945 | 100 | Plus |
2L | 23513712 | 2L | 6457540..6457917 | 856..1233 | 1890 | 100 | Plus |
2L | 23513712 | 2L | 6456919..6457115 | 509..705 | 985 | 100 | Plus |
2L | 23513712 | 2L | 6457335..6457489 | 701..855 | 775 | 100 | Plus |
2L | 23513712 | 2L | 6456742..6456866 | 388..512 | 625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6455266..6455654 | 1..389 | 100 | -> | Plus |
chr2L | 6455716..6455836 | 390..510 | 100 | -> | Plus |
chr2L | 6455893..6456085 | 511..703 | 99 | -> | Plus |
chr2L | 6456310..6456461 | 704..855 | 100 | -> | Plus |
chr2L | 6456512..6456888 | 856..1232 | 100 | -> | Plus |
chr2L | 6457143..6457980 | 1233..2070 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9526-RA | 1..1470 | 178..1647 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
frj-RA | 1..1470 | 178..1647 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
frj-RB | 1..1470 | 178..1647 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9526-RA | 1..1470 | 178..1647 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
frj-RB | 1..1470 | 178..1647 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9526-RA | 1..2070 | 1..2070 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
frj-RA | 1..2070 | 1..2070 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
frj-RA | 28..2097 | 1..2070 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9526-RA | 1..2070 | 1..2070 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
frj-RA | 28..2097 | 1..2070 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6457338..6457489 | 704..855 | 100 | -> | Plus |
2L | 6456744..6456864 | 390..510 | 100 | -> | Plus |
2L | 6456921..6457113 | 511..703 | 100 | -> | Plus |
2L | 6456294..6456682 | 1..389 | 100 | -> | Plus |
2L | 6457540..6457916 | 856..1232 | 100 | -> | Plus |
2L | 6458171..6459008 | 1233..2070 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6457338..6457489 | 704..855 | 100 | -> | Plus |
2L | 6456744..6456864 | 390..510 | 100 | -> | Plus |
2L | 6456921..6457113 | 511..703 | 100 | -> | Plus |
2L | 6456294..6456682 | 1..389 | 100 | -> | Plus |
2L | 6457540..6457916 | 856..1232 | 100 | -> | Plus |
2L | 6458171..6459008 | 1233..2070 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6457338..6457489 | 704..855 | 100 | -> | Plus |
2L | 6456744..6456864 | 390..510 | 100 | -> | Plus |
2L | 6456921..6457113 | 511..703 | 100 | -> | Plus |
2L | 6456294..6456682 | 1..389 | 100 | -> | Plus |
2L | 6457540..6457916 | 856..1232 | 100 | -> | Plus |
2L | 6458171..6459008 | 1233..2070 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6457338..6457489 | 704..855 | 100 | -> | Plus |
arm_2L | 6457540..6457916 | 856..1232 | 100 | -> | Plus |
arm_2L | 6456294..6456682 | 1..389 | 100 | -> | Plus |
arm_2L | 6456744..6456864 | 390..510 | 100 | -> | Plus |
arm_2L | 6456921..6457113 | 511..703 | 100 | -> | Plus |
arm_2L | 6458171..6459008 | 1233..2070 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6457540..6457916 | 856..1232 | 100 | -> | Plus |
2L | 6456294..6456682 | 1..389 | 100 | -> | Plus |
2L | 6456744..6456864 | 390..510 | 100 | -> | Plus |
2L | 6456921..6457113 | 511..703 | 100 | -> | Plus |
2L | 6457338..6457489 | 704..855 | 100 | -> | Plus |
2L | 6458171..6459008 | 1233..2070 | 100 | Plus |
Translation from 177 to 1646
> LD17340.pep MSIDDVIYVICLLGCIGAGSYVKKIADEGQRKLVSTGLGVLVVVIVSGLH SLHCFVSLALGTAAVLLVHPSKGHLVTFAVMFGYLVFFRIFDFYFGIPGH TNMIQMILTLKVSGIAFEKTAAWKRLQAHDEQKKNDQRDVHQESPIEITD YDVELQSLSAAEILHYSFNYIGVLTGPYYRYRTYRDYFEMPFKTYAPTVE ATLEKLKYAVFYCALYLATNYMWPLDYALSDEFFNDRSFVYRLLYVWPTF FTFRARIYTGLTLSECVCTMAGFGAYPDESDPNNGEGPRKRYQHLKRDAD KHTYNFTTIVNTRVLEVERCWTFREGMKHWNVCVQYWLAVNVYKLFPSKK YRTGATLLCSAYWHGFRPGHYFCIMGAPFYVSLEDMWDKLVRKSATGTSR RVIDVIFWIFKWFAFSYLGEAFLLSSFGNIWRFYSSVYHIGYISWAAMTA LGFYLTSQRKAAERRKKRAAEKAAGGDGIAAAIEKEKAQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21527-PA | 489 | GF21527-PA | 1..489 | 1..489 | 2308 | 89.6 | Plus |
Dana\GF12916-PA | 745 | GF12916-PA | 141..504 | 106..488 | 201 | 22.8 | Plus |
Dana\GF10775-PA | 499 | GF10775-PA | 130..476 | 102..466 | 157 | 22 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10412-PA | 485 | GG10412-PA | 1..485 | 1..489 | 2345 | 90 | Plus |
Dere\GG25239-PA | 1171 | GG25239-PA | 592..918 | 106..444 | 173 | 23.4 | Plus |
Dere\GG13418-PA | 497 | GG13418-PA | 51..476 | 25..467 | 164 | 21.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10461-PA | 489 | GH10461-PA | 1..489 | 1..489 | 2015 | 76 | Plus |
Dgri\GH21285-PA | 747 | GH21285-PA | 141..490 | 106..475 | 202 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
frj-PA | 489 | CG9526-PA | 1..489 | 1..489 | 2622 | 100 | Plus |
frj-PB | 489 | CG9526-PB | 1..489 | 1..489 | 2622 | 100 | Plus |
oys-PE | 722 | CG18445-PE | 28..511 | 1..488 | 218 | 20.5 | Plus |
oys-PB | 722 | CG18445-PB | 28..511 | 1..488 | 218 | 20.5 | Plus |
oys-PA | 722 | CG18445-PA | 28..511 | 1..488 | 218 | 20.5 | Plus |
oys-PD | 702 | CG18445-PD | 121..491 | 106..488 | 212 | 22.2 | Plus |
nes-PC | 497 | CG9655-PC | 47..476 | 21..467 | 188 | 21.2 | Plus |
nes-PB | 497 | CG9655-PB | 47..476 | 21..467 | 188 | 21.2 | Plus |
nes-PA | 497 | CG9655-PA | 47..476 | 21..467 | 188 | 21.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17715-PA | 489 | GI17715-PA | 1..489 | 1..489 | 1920 | 72.8 | Plus |
Dmoj\GI19773-PA | 1376 | GI19773-PA | 784..1137 | 106..477 | 198 | 22.8 | Plus |
Dmoj\GI13549-PA | 474 | GI13549-PA | 70..388 | 57..404 | 151 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25669-PA | 435 | GL25669-PA | 1..423 | 1..422 | 1940 | 87.5 | Plus |
Dper\GL10561-PA | 728 | GL10561-PA | 141..494 | 106..476 | 202 | 22.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21856-PA | 485 | GA21856-PA | 1..485 | 1..489 | 2187 | 85.7 | Plus |
Dpse\GA25383-PA | 170 | GA25383-PA | 1..170 | 315..489 | 800 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18630-PA | 489 | GM18630-PA | 1..489 | 1..489 | 2598 | 98.4 | Plus |
Dsec\GM20559-PA | 691 | GM20559-PA | 111..481 | 106..488 | 201 | 22.2 | Plus |
Dsec\GM14886-PA | 496 | GM14886-PA | 47..491 | 21..489 | 163 | 20.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23410-PA | 489 | GD23410-PA | 1..489 | 1..489 | 2603 | 98.4 | Plus |
Dsim\GD26012-PA | 1026 | GD26012-PA | 141..511 | 106..488 | 200 | 22.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11517-PA | 489 | GJ11517-PA | 1..489 | 1..489 | 2011 | 78.3 | Plus |
Dvir\GJ17620-PA | 744 | GJ17620-PA | 28..485 | 1..470 | 195 | 21.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18722-PA | 488 | GK18722-PA | 1..488 | 1..489 | 2173 | 82.2 | Plus |
Dwil\GK21363-PA | 715 | GK21363-PA | 28..467 | 1..444 | 188 | 21.5 | Plus |
Dwil\GK19695-PA | 514 | GK19695-PA | 136..503 | 103..487 | 181 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13879-PA | 489 | GE13879-PA | 1..489 | 1..489 | 2441 | 95.3 | Plus |
Dyak\GE21852-PA | 721 | GE21852-PA | 141..511 | 106..488 | 200 | 22.2 | Plus |
Dyak\GE22919-PA | 497 | GE22919-PA | 47..476 | 21..467 | 159 | 20.6 | Plus |
Dyak\GE22515-PA | 497 | GE22515-PA | 47..476 | 21..467 | 159 | 20.6 | Plus |
Translation from 177 to 1646
> LD17340.hyp MSIDDVIYVICLLGCIGAGSYVKKIADEGQRKLVSTGLGVLVVVIVSGLH SLHCFVSLALGTAAVLLVHPSKGHLVTFAVMFGYLVFFRIFDFYFGIPGH TNMIQMILTLKVSGIAFEKTAAWKRLQAHDEQKKNDQRDVHQESPIEITD YDVELQSLSAAEILHYSFNYIGVLTGPYYRYRTYRDYFEMPFKTYAPTVE ATLEKLKYAVFYCALYLATNYMWPLDYALSDEFFNDRSFVYRLLYVWPTF FTFRARIYTGLTLSECVCTMAGFGAYPDESDPNNGEGPRKRYQHLKRDAD KHTYNFTTIVNTRVLEVERCWTFREGMKHWNVCVQYWLAVNVYKLFPSKK YRTGATLLCSAYWHGFRPGHYFCIMGAPFYVSLEDMWDKLVRKSATGTSR RVIDVIFWIFKWFAFSYLGEAFLLSSFGNIWRFYSSVYHIGYISWAAMTA LGFYLTSQRKAAERRKKRAAEKAAGGDGIAAAIEKEKAQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
frj-PA | 489 | CG9526-PA | 1..489 | 1..489 | 2622 | 100 | Plus |
frj-PB | 489 | CG9526-PB | 1..489 | 1..489 | 2622 | 100 | Plus |
oys-PE | 722 | CG18445-PE | 28..511 | 1..488 | 218 | 20.5 | Plus |
oys-PB | 722 | CG18445-PB | 28..511 | 1..488 | 218 | 20.5 | Plus |
oys-PA | 722 | CG18445-PA | 28..511 | 1..488 | 218 | 20.5 | Plus |