BDGP Sequence Production Resources |
Search the DGRC for LD17368
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 173 |
Well: | 68 |
Vector: | pBS SK- |
Associated Gene/Transcript | Osi6-RA |
Protein status: | LD17368.pep: gold |
Sequenced Size: | 1534 |
Gene | Date | Evidence |
---|---|---|
Osi6 | 2008-04-29 | Release 5.5 accounting |
Osi6 | 2008-04-29 | Picked prior to 5.5 |
Osi6 | 2008-08-15 | Release 5.9 accounting |
Osi6 | 2008-12-18 | 5.12 accounting |
1534 bp assembled on 2007-11-15
GenBank Submission: BT031257
> LD17368.complete ATTCGAATGAACACACCAGTGATTTCGGTGGTGCCAAAGGAATTCAGTCT CAGAAATCACCAATCCACCAACCCAGCCACCAGCATGAAGTTCTTCGTTG CCACCGCCTGCATCCTGCTCCTGGCAGCAGGTATCTCTGCCGATCCCGTC AAGGCCGCTGAGGAGCAGCCCGGCGCCTTTGCCCAGTGCCTCGAGTCCGA CTCCATCTCGTGCCTGCAGCTCACGCTCTTCCGCAAGGCCAAGTCCGTGT TCGATAACCCTCAGATCGAGCTTTTCGGTGGTGTTTCTCTGGTGAAGTCC AATGAAGGTCGTCAGGGCAAGTCCCTGGACAACTCCCTGGCTGTTGAGGC CGCTCCCACCGTGGAGGCCCGCACCGCCGAGATGGGCAACTACTTCATGG ACAACGCCAAGAGCTTCTTCGCTGAACGCTCCCTGAACTTCAACTTCGCT AACGCCGCTCGCAGCGTGGCCCGCGCCATTCCCGATGACATCAAGGCTGA TCTCCGCGAGCTGGTTGTTGAGTCCCGTACCCGCAAGAAGAAGCTGCTGA AGAAGTTCCTGCCCATCCTGCTGGGAGTTGGTGCTAAGATCGCCGTCCTT GGAGTCGGCTCCATCTTCGGACTACTGTTCCTGGCCAAGAAGGCACTGGT TGTGTCTGTTATCGCCTTCTTCCTGGCTCTGGCTGCTGGTGCTTCCAGCG GACTGGGACGCATCGGTGGATCCGGAGGCGGCGGCGGTCTGCTCGGCGGT CTGGGAGGTCTCTTCGGCGGCAAGAACGCCGGTGGATCGTCGGCTGCCAG CACCGGTGGATGGTCCTCGGGTGGTGGTGCCTCCAGCGCCGGATGGTCCT CTGGCGGCAGCTCGGGTTGGGACACCCATGGTGCCTACAGCTCGCCTGTG GCCCAGACCATCGCCTACCAGGGATACAAGCAGGCCCGCCGGTAAACAAT TGGTCAAGAGCCAAATTAACCGAAGGACGAAGGCCAAGGAGAGAGAGAGA AACAATCGCTAAAAATGATGACCTATATTTATATTTATTTATAAATTATT TATTTTAATTTATTACTTGAACGAGAAGTACGAGACGAACAAAGTGCCTT CCATTAGACAAAAAAACAATCACTTAATAACAAGACACACCCAAACACCA AACACCACCTTTCATCCAGAACCGCCAATAACCTCCACAAAGGAATCTTT ACTACTTTCCGCACTCCTCACTCTTCACGCTGTATCTCAATTTCATGGCT GCACCTTTGATAAATGGACTGCAAATCTTTGCGACTAGTCGATCCATCAG TCAAAGCCAGTCGCCTCGCCCATCTAACTGTATCTATCTCTCATCTGTTT CCATCTATCTCTGTTCTACGACTATCTCTATCTGTACCTCTACCTTAATC TATCTACCTATCTGTCTATCCATATCTGTCTGACTATCTGGACTTTCTCA CTTTACCGCCCGGGAAAGACCAACCGAATGCTGCTAAATCAAAGAATCAA ATAATAATTCAAACATAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 2060382..2060606 | 1..225 | 100 | -> | Plus |
chr3R | 2061235..2062525 | 226..1516 | 93 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi6-RA | 1..939 | 7..945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi6-RA | 1..939 | 7..945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi6-RA | 1..939 | 7..945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi6-RA | 1..939 | 7..945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi6-RA | 1..939 | 7..945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi6-RA | 22..1537 | 1..1516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi6-RA | 22..1537 | 1..1516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi6-RA | 23..1538 | 1..1516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi6-RA | 22..1537 | 1..1516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Osi6-RA | 23..1538 | 1..1516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6234730..6234954 | 1..225 | 100 | -> | Plus |
3R | 6235583..6236873 | 226..1516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6234730..6234954 | 1..225 | 100 | -> | Plus |
3R | 6235583..6236873 | 226..1516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6234730..6234954 | 1..225 | 100 | -> | Plus |
3R | 6235583..6236873 | 226..1516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 2060452..2060676 | 1..225 | 100 | -> | Plus |
arm_3R | 2061305..2062595 | 226..1516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5975561..5975785 | 1..225 | 100 | -> | Plus |
3R | 5976414..5977704 | 226..1516 | 100 | Plus |
Translation from 0 to 944
> LD17368.hyp IRMNTPVISVVPKEFSLRNHQSTNPATSMKFFVATACILLLAAGISADPV KAAEEQPGAFAQCLESDSISCLQLTLFRKAKSVFDNPQIELFGGVSLVKS NEGRQGKSLDNSLAVEAAPTVEARTAEMGNYFMDNAKSFFAERSLNFNFA NAARSVARAIPDDIKADLRELVVESRTRKKKLLKKFLPILLGVGAKIAVL GVGSIFGLLFLAKKALVVSVIAFFLALAAGASSGLGRIGGSGGGGGLLGG LGGLFGGKNAGGSSAASTGGWSSGGGASSAGWSSGGSSGWDTHGAYSSPV AQTIAYQGYKQARR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Osi6-PB | 312 | CG1151-PB | 1..312 | 3..314 | 1562 | 100 | Plus |
Osi6-PA | 312 | CG1151-PA | 1..312 | 3..314 | 1562 | 100 | Plus |
Osi14-PA | 268 | CG1155-PA | 1..254 | 29..308 | 206 | 29 | Plus |
Osi12-PA | 295 | CG1154-PA | 59..268 | 65..311 | 174 | 28.9 | Plus |
CG34327-PA | 220 | CG34327-PA | 64..122 | 228..295 | 163 | 54.4 | Plus |
Translation from 6 to 944
> LD17368.pep MNTPVISVVPKEFSLRNHQSTNPATSMKFFVATACILLLAAGISADPVKA AEEQPGAFAQCLESDSISCLQLTLFRKAKSVFDNPQIELFGGVSLVKSNE GRQGKSLDNSLAVEAAPTVEARTAEMGNYFMDNAKSFFAERSLNFNFANA ARSVARAIPDDIKADLRELVVESRTRKKKLLKKFLPILLGVGAKIAVLGV GSIFGLLFLAKKALVVSVIAFFLALAAGASSGLGRIGGSGGGGGLLGGLG GLFGGKNAGGSSAASTGGWSSGGGASSAGWSSGGSSGWDTHGAYSSPVAQ TIAYQGYKQARR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16378-PA | 288 | GF16378-PA | 1..288 | 27..312 | 1382 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13147-PA | 312 | GG13147-PA | 1..312 | 1..312 | 1577 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14022-PA | 294 | GH14022-PA | 1..294 | 27..312 | 896 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Osi6-PB | 312 | CG1151-PB | 1..312 | 1..312 | 1562 | 100 | Plus |
Osi6-PA | 312 | CG1151-PA | 1..312 | 1..312 | 1562 | 100 | Plus |
Osi14-PA | 268 | CG1155-PA | 1..254 | 27..306 | 206 | 29 | Plus |
Osi12-PA | 295 | CG1154-PA | 59..268 | 63..309 | 174 | 28.9 | Plus |
CG34327-PA | 220 | CG34327-PA | 64..122 | 226..293 | 163 | 54.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24394-PA | 287 | GI24394-PA | 1..287 | 27..312 | 932 | 85.5 | Plus |
Dmoj\GI24403-PA | 272 | GI24403-PA | 45..262 | 61..306 | 196 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24058-PA | 288 | GL24058-PA | 1..288 | 27..312 | 949 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26494-PA | 288 | GA26494-PA | 1..288 | 27..312 | 960 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10867-PA | 286 | GM10867-PA | 1..286 | 27..312 | 1451 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19848-PA | 312 | GD19848-PA | 1..312 | 1..312 | 1583 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14250-PA | 290 | GJ14250-PA | 1..290 | 27..312 | 912 | 88 | Plus |
Dvir\GJ14261-PA | 277 | GJ14261-PA | 1..233 | 27..263 | 164 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13036-PA | 298 | GK13036-PA | 1..194 | 27..219 | 851 | 92.8 | Plus |
Dwil\GK22310-PA | 273 | GK22310-PA | 1..167 | 27..219 | 692 | 77.8 | Plus |
Dwil\GK19328-PA | 228 | GK19328-PA | 1..146 | 74..219 | 620 | 93.2 | Plus |
Dwil\GK21309-PA | 103 | GK21309-PA | 1..103 | 27..128 | 475 | 86.4 | Plus |
Dwil\GK22848-PA | 164 | GK22848-PA | 5..164 | 154..312 | 290 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10189-PA | 312 | GE10189-PA | 1..312 | 1..312 | 1564 | 97.8 | Plus |