Clone LD17549 Report

Search the DGRC for LD17549

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:175
Well:49
Vector:pBS SK-
Associated Gene/TranscriptBicC-RA
Protein status:LD17549.pep: gold
Preliminary Size:3269
Sequenced Size:3959

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4824 2002-01-01 Sim4 clustering to Release 2
CG4824 2003-01-01 Sim4 clustering to Release 3
BicC 2008-04-29 Release 5.5 accounting
BicC 2008-08-15 Release 5.9 accounting
BicC 2008-12-18 5.12 accounting

Clone Sequence Records

LD17549.complete Sequence

3959 bp (3959 high quality bases) assembled on 2005-08-09

GenBank Submission: BT023837

> LD17549.complete
TAAAATATTAAAAAATATTCAAATATAACTAACTAACGCGCAGTGCACGA
TTTTCTGACAACAATTCAGTTTCGCTTTTCATGAGACTCCATTGCATTTT
CCTTTGTGTTTTTCACACACGTGGTGTTTTTCTGTTACTCGCACTTCGAT
AGTGGTTATTTTTTTTGGTTACATTGAAAAAATACACCGACTGCCAGCCG
AATTCCCATTCGAACCTTAATTTGACCAATTGACGGAAAATTAATTGCGC
CCAAAATTAATTAGCAAGCGGATATACAATTTTTTTACGTGAAAAGAGCG
TGTTATTTGTCGAAAAGATTTTACAATTGATTGTGTTTAAGTAAATTAAC
CTGCGATATCTATGTGTATGTGCTACGATCCGAATTTCTGACATTACGAT
CACACCTTAAATGCCTTTCGTCGAGAGATTTCAACAAATACGTAATTTTG
TTATGAACGTCTGCCTCGTCGAGGCCATCCAATTCGTCCAGGACCTCTCG
CACGCCATCTGTCTGGACCTCCAGGGCCTATTTAATCTCAAGTAGAGATC
ACCGAGCGATCTCCCAGCGCTCATCCCATCAATTCAGATACACTTTACTT
CATTAAGTAGCAGCAATCATCTAACAAAGCTGACCAAACAACGGACCGGC
TTCCAGAATCCTTAACTGAGACGGACGTTTTGCTTGGTTTTTAAAACTAA
ACGACTTTTTGGTACCCACACCTGTTGACCTCTGACGAATTTCTCGATCC
ACTGACCGATCCACTGATCCAGTGATCATCATCATCATCCGAATTCCACA
ATGTTGTCCTGTGCCTCTTTCAATAAACTGATGTATCCGTCGGCCGCAGA
TGTTGCCAAACCGCCAATGGTGGGCTTGGAGGTGGAAGCTGGATCCATTG
GATCCCTGTCCAGTCTTCACGCCCTTCCATCGACCACCTCGGTGGGCAGT
GGAGCCCCCAGCGAGACGCAGAGCGAGATCTCCTCCGTGGATAGCGATTG
GAGTGACATACGCGCCATCGCCATGAAGTTGGGCGTTCAAAACCCAGACG
ATCTCCACACGGAACGTTTCAAGGTGGATCGACAGAAATTGGAACAGTTA
ATAAAAGCGGAGAGCTCCATTGAGGGAATGAATGGAGCTGAATATTTTTT
CCATGACATCATGAACACTACGGATACTTATGTGAGCTGGCCTTGCAGAC
TCAAAATTGGTGCCAAGAGCAAGAAGGATCCCCATGTGCGAATTGTGGGA
AAGGTGGATCAGGTTCAGCGGGCAAAGGAGCGCATCCTTAGCAGTCTTGA
CTCCAGGGGCACTCGAGTGATCATGAAAATGGACGTCAGCTACACGGATC
ACTCGTACATCATCGGACGAGGTGGCAACAACATCAAGCGCATAATGGAC
GACACGCATACCCATATCCACTTCCCCGACTCGAATCGCTCCAATCCCAC
GGAGAAATCCAACCAGGTGTCGCTGTGCGGCAGCCTAGAGGGCGTGGAGC
GAGCCCGGGCTCTCGTTCGGCTCTCCACACCGCTGCTCATCTCCTTCGAG
ATGCCCGTAATGGGACCCAACAAGCCGCAGCCCGACCACGAGACTCCCTA
CATCAAGATGATCGAGACCAAGTTCAATGTTCAGGTCATATTCTCCACGC
GTCCAAAATTGCATACCTCGCTGGTTTTGGTCAAGGGATCCGAGAAGGAA
TCGGCGCAGGTCCGAGATGCCACGCAGCTGCTGATCAACTTCGCCTGTGA
GAGTATTGCGAGCCAAATCCTGGTGAATGTCCAGATGGAGATCTCGCCGC
AGCATCACGAAATCGTCAAGGGCAAGAACAACGTGAATCTGCTGAGCATT
ATGGAGCGAACCCAGACCAAGATCATATTCCCCGATCTGAGCGACATGAA
CGTGAAGCCCCTGAAGAAGTCCCAGGTCACGATCAGCGGACGCATCGACG
ACGTCTACTTGGCGCGACAACAATTGCTTGGCAATTTGCCCGTAGCATTG
ATTTTTGACTTTCCGGACAACCACAACGATGCATCCGAAATAATGAGCCT
CAACACCAAGTACGGCGTCTACATCACGTTGCGCCAGAAACAGCGGCAGA
GCACCCTGGCCATTGTGGTCAAGGGAGTGGAGAAGTTTATAGACAAAATC
TACGAGGCCCGCCAGGAGATCCTGCGCCTGGCCACGCCATTCGTGAAGCC
CGAGATCCCCGACTACTACTTCATGCCAAAGGACAAAGACCTTAATCTCG
CCTACCGCACCCAGTTAACTGCTCTGCTGGCTGGGTATGTGGACAGCCCG
AAGACTCCATCGCTGCTGCCGCCCTCCTTGGCTGGCCAACTGACGCCCTA
TGCCAACAACAATCACCTGTTGTTGAACGCCAATGGCTTGGCCACGCCCA
CTGGGGTGTGTGCGCCCACCCAAAAATATATGCAGTTGCACAACAGCTTC
CAACAGGCTCAGAATCGTTCCATGGTGGCTGGTGGGCAGAGCAACAATGG
CAACTATCTGCAGGTTCCTGGAGCGGTGGCGCCGCCTCTCAAACCGCCGA
CTGTTTCGCCACGGAACAGCTGCAGTCAGAATACCAGTGGTTACCAGAGC
TTTAGCAGCAGCACCACCTCCCTGGAGCAGTCGTATCCGCCGTATGCCCA
ATTGCCGGGCACCGTGTCGTCCACTTCATCCTCCACCGCGGGAAGCCAAA
ATCGGGCGCATTATTCGCCAGATTCCACTTACGGCAGTGAGGGTGGTGGC
GTTGGCGGCGGAGGTGGTGGTGGGGCGCGTCTGGGACGACGCCTTAGCGA
TGGAGTGCTGCTGGGGCTGAGTAATTCCAACGGTGGAGGAGGTAACTCCG
GAGGAGCCCACCTCCTGCCCGGCAGTGCCGAGAGCTATCGGAGTTTGCAC
TATGACCTTGGAGGAAACAAGCACTCCGGCCACCGTGCCTTTGACTTCGA
CATGAAACGGGCCCTGGGCTACAAAGCCATGGAGCGCACCCCGGTGGCAG
GGGAGCTGCGAACACCCACGACCGCTTGGATGGGAATGGGCTTGAGCAGC
ACCTCGCCCGCCCCTGCCCCGCTGGAGAACGGGGAAAATGGGGCTGCTGG
TGGAGGAGCATCTAGTGGGTGGCGGCTGCCACCAGGACTGGGTTCCCCTT
ACGGACTGAGTGCCACCACCGGACTCCTGGACGCCACTCCAGTCAACCGA
CGGATGCAGCTAGCCAAGCACAAGGACATCCAGACTCTGCTCACCAGTTT
GGGTCTGGAGCACTACATCAAAATATTCGTTCTAAACGAAATCGACCTGG
AGGTGTTCACCACCCTGACCGAGGAAAACCTGATGGAGCTGGGTATCGCG
GCGTTTGGAGCTCGCAAGAAGCTGCTGACGGCCATTCACACGCTGCTGGC
CAACGAGGCGGCCTGCAGCACAATGCCCAGCAGCAGCTCCTCGCAGAACT
CCTCGTCGCCGCGATTCTCCGGAAGTGCGGCCCCAGGCGCAGAGCGCCGT
CCCTCCAACCAGTGGTGATCCGCTCCTGTCGTTCGACCCCATTGCCTCGA
ATTCTTTTTTTCTTTTTTTTTTGCATGCCCATTTATTTGGTAGTCGTAAG
ATCAAGAGAATCGGAACGGTAAAAAGTATAGGAAGAAGTCAGGAAGAAAA
TGGCAACTCCCTGGGCGAATAGCTTTCCCGCACAACACAGCCTTGACCTT
GACTTATACTCGCATTTGTACTCAAATTCCAAGTAGCATAGCTGCGCTCG
GGAAAGTGCACAGTTTTCCCAGTGTGCCAATAGGTCGTAGTTGCCTTTAT
TTTAAGCGATTAATTTATTTTGAAATTATTTATATAGGAAACCGTCTTAA
GCAAAAAAAAAAAATATTGTGAATTATTTATGAAATCTAACTAAACGAAA
TCACTTGTTGTAAGAAATGAATTTATGTAAACTAACTGAAAAAAAAAAAA
AAAAAAAAA

LD17549.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:31:49
Subject Length Description Subject Range Query Range Score Percent Strand
BicC-RA 4134 BicC-RA 99..4052 1..3953 19715 99.9 Plus
BicC-RB 3830 BicC-RB 192..3748 398..3953 17730 99.9 Plus
BicC.a 3635 BicC.a 33..3588 399..3953 17725 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:24:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 16045381..16046511 2140..3270 5655 100 Plus
chr2L 23010047 chr2L 16046740..16047408 3271..3938 3295 99.9 Plus
chr2L 23010047 chr2L 16042605..16043143 569..1107 2695 100 Plus
chr2L 23010047 chr2L 16040912..16041309 1..398 1975 99.7 Plus
chr2L 23010047 chr2L 16044808..16045190 1760..2142 1915 100 Plus
chr2L 23010047 chr2L 16043847..16044176 1307..1636 1650 100 Plus
chr2L 23010047 chr2L 16041856..16042027 398..569 860 100 Plus
chr2L 23010047 chr2L 16044618..16044748 1630..1760 655 100 Plus
chr2L 23010047 chr2L 16043702..16043783 1227..1308 410 100 Plus
chr2L 23010047 chr2L 16043570..16043639 1158..1227 350 100 Plus
chr2L 23010047 chr2L 16043203..16043254 1106..1157 260 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:05:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:24:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16046599..16047729 2140..3270 5655 100 Plus
2L 23513712 2L 16047958..16048641 3271..3953 3355 99.7 Plus
2L 23513712 2L 16043823..16044361 569..1107 2695 100 Plus
2L 23513712 2L 16042130..16042527 1..398 1990 100 Plus
2L 23513712 2L 16046026..16046408 1760..2142 1915 100 Plus
2L 23513712 2L 16045065..16045394 1307..1636 1650 100 Plus
2L 23513712 2L 16043074..16043245 398..569 860 100 Plus
2L 23513712 2L 16045836..16045966 1630..1760 655 100 Plus
2L 23513712 2L 16044920..16045001 1227..1308 410 100 Plus
2L 23513712 2L 16044788..16044857 1158..1227 350 100 Plus
2L 23513712 2L 16044421..16044472 1106..1157 260 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:22:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16046599..16047729 2140..3270 5655 100 Plus
2L 23513712 2L 16047958..16048641 3271..3953 3365 99.7 Plus
2L 23513712 2L 16043823..16044361 569..1107 2695 100 Plus
2L 23513712 2L 16042130..16042527 1..398 1990 100 Plus
2L 23513712 2L 16046026..16046408 1760..2142 1915 100 Plus
2L 23513712 2L 16045065..16045394 1307..1636 1650 100 Plus
2L 23513712 2L 16043074..16043245 398..569 860 100 Plus
2L 23513712 2L 16045836..16045966 1630..1760 655 100 Plus
2L 23513712 2L 16044920..16045001 1227..1308 410 100 Plus
2L 23513712 2L 16044788..16044857 1158..1227 350 100 Plus
2L 23513712 2L 16044421..16044472 1106..1157 260 100 Plus
Blast to na_te.dros performed on 2019-03-15 18:24:35 has no hits.

LD17549.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:25:38 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 16044623..16044748 1635..1760 100 -> Plus
chr2L 16043848..16044174 1308..1634 100 -> Plus
chr2L 16040945..16041309 34..398 100 -> Plus
chr2L 16041857..16042027 399..569 100 -> Plus
chr2L 16042606..16043143 570..1107 100 -> Plus
chr2L 16043205..16043254 1108..1157 100 -> Plus
chr2L 16043570..16043639 1158..1227 100 -> Plus
chr2L 16043703..16043782 1228..1307 100 -> Plus
chr2L 16044809..16045190 1761..2142 100 -> Plus
chr2L 16045384..16046511 2143..3270 96 -> Plus
chr2L 16046740..16047408 3271..3938 95   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:52:20 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
BicC-RA 1..2718 801..3518 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:55:08 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
BicC-RA 1..2718 801..3518 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:02:16 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
BicC-RB 1..2718 801..3518 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:35:48 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
BicC-RA 1..2718 801..3518 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:01:38 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
BicC-RB 1..2718 801..3518 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:31:13 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
BicC-RA 99..4037 1..3938 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:55:08 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
BicC-RA 99..4037 1..3938 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:02:16 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
BicC-RA 84..4022 1..3938 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:35:49 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
BicC-RA 99..4037 1..3938 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:01:38 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
BicC-RA 84..4022 1..3938 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:25:38 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16042130..16042527 1..398 100 -> Plus
2L 16043075..16043245 399..569 100 -> Plus
2L 16043824..16044361 570..1107 100 -> Plus
2L 16044423..16044472 1108..1157 100 -> Plus
2L 16044788..16044857 1158..1227 100 -> Plus
2L 16044921..16045000 1228..1307 100 -> Plus
2L 16045066..16045392 1308..1634 100 -> Plus
2L 16045841..16045966 1635..1760 100 -> Plus
2L 16046027..16046408 1761..2142 100 -> Plus
2L 16046602..16047729 2143..3270 100 -> Plus
2L 16047958..16048626 3271..3938 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:25:38 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16042130..16042527 1..398 100 -> Plus
2L 16043075..16043245 399..569 100 -> Plus
2L 16043824..16044361 570..1107 100 -> Plus
2L 16044423..16044472 1108..1157 100 -> Plus
2L 16044788..16044857 1158..1227 100 -> Plus
2L 16044921..16045000 1228..1307 100 -> Plus
2L 16045066..16045392 1308..1634 100 -> Plus
2L 16045841..16045966 1635..1760 100 -> Plus
2L 16046027..16046408 1761..2142 100 -> Plus
2L 16046602..16047729 2143..3270 100 -> Plus
2L 16047958..16048626 3271..3938 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:25:38 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16042130..16042527 1..398 100 -> Plus
2L 16043075..16043245 399..569 100 -> Plus
2L 16043824..16044361 570..1107 100 -> Plus
2L 16044423..16044472 1108..1157 100 -> Plus
2L 16044788..16044857 1158..1227 100 -> Plus
2L 16044921..16045000 1228..1307 100 -> Plus
2L 16045066..16045392 1308..1634 100 -> Plus
2L 16045841..16045966 1635..1760 100 -> Plus
2L 16046027..16046408 1761..2142 100 -> Plus
2L 16046602..16047729 2143..3270 100 -> Plus
2L 16047958..16048626 3271..3938 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:02:16 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16042130..16042527 1..398 100 -> Plus
arm_2L 16043075..16043245 399..569 100 -> Plus
arm_2L 16043824..16044361 570..1107 100 -> Plus
arm_2L 16044423..16044472 1108..1157 100 -> Plus
arm_2L 16044788..16044857 1158..1227 100 -> Plus
arm_2L 16044921..16045000 1228..1307 100 -> Plus
arm_2L 16045066..16045392 1308..1634 100 -> Plus
arm_2L 16045841..16045966 1635..1760 100 -> Plus
arm_2L 16046027..16046408 1761..2142 100 -> Plus
arm_2L 16046602..16047729 2143..3270 100 -> Plus
arm_2L 16047958..16048626 3271..3938 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:14:24 Download gff for LD17549.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16042130..16042527 1..398 100 -> Plus
2L 16043075..16043245 399..569 100 -> Plus
2L 16043824..16044361 570..1107 100 -> Plus
2L 16044423..16044472 1108..1157 100 -> Plus
2L 16044788..16044857 1158..1227 100 -> Plus
2L 16044921..16045000 1228..1307 100 -> Plus
2L 16045066..16045392 1308..1634 100 -> Plus
2L 16045841..16045966 1635..1760 100 -> Plus
2L 16046027..16046408 1761..2142 100 -> Plus
2L 16046602..16047729 2143..3270 100 -> Plus
2L 16047958..16048626 3271..3938 99   Plus

LD17549.pep Sequence

Translation from 800 to 3517

> LD17549.pep
MLSCASFNKLMYPSAADVAKPPMVGLEVEAGSIGSLSSLHALPSTTSVGS
GAPSETQSEISSVDSDWSDIRAIAMKLGVQNPDDLHTERFKVDRQKLEQL
IKAESSIEGMNGAEYFFHDIMNTTDTYVSWPCRLKIGAKSKKDPHVRIVG
KVDQVQRAKERILSSLDSRGTRVIMKMDVSYTDHSYIIGRGGNNIKRIMD
DTHTHIHFPDSNRSNPTEKSNQVSLCGSLEGVERARALVRLSTPLLISFE
MPVMGPNKPQPDHETPYIKMIETKFNVQVIFSTRPKLHTSLVLVKGSEKE
SAQVRDATQLLINFACESIASQILVNVQMEISPQHHEIVKGKNNVNLLSI
MERTQTKIIFPDLSDMNVKPLKKSQVTISGRIDDVYLARQQLLGNLPVAL
IFDFPDNHNDASEIMSLNTKYGVYITLRQKQRQSTLAIVVKGVEKFIDKI
YEARQEILRLATPFVKPEIPDYYFMPKDKDLNLAYRTQLTALLAGYVDSP
KTPSLLPPSLAGQLTPYANNNHLLLNANGLATPTGVCAPTQKYMQLHNSF
QQAQNRSMVAGGQSNNGNYLQVPGAVAPPLKPPTVSPRNSCSQNTSGYQS
FSSSTTSLEQSYPPYAQLPGTVSSTSSSTAGSQNRAHYSPDSTYGSEGGG
VGGGGGGGARLGRRLSDGVLLGLSNSNGGGGNSGGAHLLPGSAESYRSLH
YDLGGNKHSGHRAFDFDMKRALGYKAMERTPVAGELRTPTTAWMGMGLSS
TSPAPAPLENGENGAAGGGASSGWRLPPGLGSPYGLSATTGLLDATPVNR
RMQLAKHKDIQTLLTSLGLEHYIKIFVLNEIDLEVFTTLTEENLMELGIA
AFGARKKLLTAIHTLLANEAACSTMPSSSSSQNSSSPRFSGSAAPGAERR
PSNQW*

LD17549.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:20:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14935-PA 938 GF14935-PA 1..938 1..905 3847 85.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:20:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25188-PA 905 GG25188-PA 1..905 1..905 4723 97.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:20:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10394-PA 913 GH10394-PA 1..913 1..905 3417 76 Plus
Dgri\GH22440-PA 426 GH22440-PA 1..426 537..905 1065 62.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:24
Subject Length Description Subject Range Query Range Score Percent Strand
BicC-PA 905 CG4824-PA 1..905 1..905 4659 100 Plus
BicC-PB 905 CG4824-PB 1..905 1..905 4659 100 Plus
BicC-PD 785 CG4824-PD 1..785 121..905 4054 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:20:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17371-PA 949 GI17371-PA 1..949 1..905 3547 76.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:20:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15307-PA 1184 GL15307-PA 280..1184 33..905 3717 84.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18459-PA 952 GA18459-PA 1..952 1..905 3781 81 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:20:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18651-PA 905 GM18651-PA 1..905 1..905 4773 98.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:20:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24037-PA 905 GD24037-PA 1..905 1..905 4777 98.9 Plus
Dsim\GD15006-PA 92 GD15006-PA 1..87 251..337 468 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:20:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18051-PA 873 GJ18051-PA 1..871 1..823 3340 75.5 Plus
Dvir\GJ15905-PA 661 GJ15905-PA 32..455 66..499 1137 53 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:20:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24769-PA 936 GK24769-PA 1..936 1..905 3676 81.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:20:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21299-PA 905 GE21299-PA 1..905 1..905 4697 97.2 Plus

LD17549.hyp Sequence

Translation from 800 to 3517

> LD17549.hyp
MLSCASFNKLMYPSAADVAKPPMVGLEVEAGSIGSLSSLHALPSTTSVGS
GAPSETQSEISSVDSDWSDIRAIAMKLGVQNPDDLHTERFKVDRQKLEQL
IKAESSIEGMNGAEYFFHDIMNTTDTYVSWPCRLKIGAKSKKDPHVRIVG
KVDQVQRAKERILSSLDSRGTRVIMKMDVSYTDHSYIIGRGGNNIKRIMD
DTHTHIHFPDSNRSNPTEKSNQVSLCGSLEGVERARALVRLSTPLLISFE
MPVMGPNKPQPDHETPYIKMIETKFNVQVIFSTRPKLHTSLVLVKGSEKE
SAQVRDATQLLINFACESIASQILVNVQMEISPQHHEIVKGKNNVNLLSI
MERTQTKIIFPDLSDMNVKPLKKSQVTISGRIDDVYLARQQLLGNLPVAL
IFDFPDNHNDASEIMSLNTKYGVYITLRQKQRQSTLAIVVKGVEKFIDKI
YEARQEILRLATPFVKPEIPDYYFMPKDKDLNLAYRTQLTALLAGYVDSP
KTPSLLPPSLAGQLTPYANNNHLLLNANGLATPTGVCAPTQKYMQLHNSF
QQAQNRSMVAGGQSNNGNYLQVPGAVAPPLKPPTVSPRNSCSQNTSGYQS
FSSSTTSLEQSYPPYAQLPGTVSSTSSSTAGSQNRAHYSPDSTYGSEGGG
VGGGGGGGARLGRRLSDGVLLGLSNSNGGGGNSGGAHLLPGSAESYRSLH
YDLGGNKHSGHRAFDFDMKRALGYKAMERTPVAGELRTPTTAWMGMGLSS
TSPAPAPLENGENGAAGGGASSGWRLPPGLGSPYGLSATTGLLDATPVNR
RMQLAKHKDIQTLLTSLGLEHYIKIFVLNEIDLEVFTTLTEENLMELGIA
AFGARKKLLTAIHTLLANEAACSTMPSSSSSQNSSSPRFSGSAAPGAERR
PSNQW*

LD17549.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:55:46
Subject Length Description Subject Range Query Range Score Percent Strand
BicC-PA 905 CG4824-PA 1..905 1..905 4659 100 Plus
BicC-PB 905 CG4824-PB 1..905 1..905 4659 100 Plus
BicC-PD 785 CG4824-PD 1..785 121..905 4054 100 Plus