BDGP Sequence Production Resources |
Search the DGRC for LD17773
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 177 |
Well: | 73 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG3919-RB |
Protein status: | LD17773.pep: gold |
Preliminary Size: | 1547 |
Sequenced Size: | 1376 |
Gene | Date | Evidence |
---|---|---|
CG3919 | 2001-01-01 | Release 2 assignment |
CG3919 | 2001-11-29 | Blastp of sequenced clone |
CG3919 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3919 | 2008-04-29 | Release 5.5 accounting |
CG3919 | 2008-08-15 | Release 5.9 accounting |
CG3919 | 2008-12-18 | 5.12 accounting |
1376 bp (1376 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069455
> LD17773.complete TTCGAATCAGTCTAGTGCTCATGTGCTTTAAAATCAAGAACAATTGCTAT TTGAAATTGCAACATTCATTTACAACTGCATCACTTGTTGGCAGCAGCAC GAAATCGCAGTGTTCAAAGTTGCTAAACACTTGTAATAGCAGCAACTCCG GCGTCCACGCCAACAACTGCCGCGTGCACGGAAGCAACGAGCGGCTTGAG CCCGAACTTAATAAGCCAAAACTCGTGATAAAAGCACTGACATCGATTAA TTGGAGCATTTTTAAACCTAATTCACTTTTTATATATGAAATGAATACAC GCCGTCGGTCCATAGCTCCACCACCGAACGTTTACGCCATCAATGCCAAA ATATGTCATTTGGTGAAACTACATCCTTGTCTTTACGATCGTCACGATGA CAACTACTTGCGGAAATCGACTGTGAAAAATGCGTGGAAGGAAATATCCA ATGAGATGCGAAATTCGGTTAAAAGCTGCAAGGAACGTTGGCGCAACATT CGCTCCAGCTATGCCCGCTCAATAAAGTTGCATCACGGTGCGAATACGTA CTATCTTAACAGCGAGCTGAAGTTCCTGCAAAAGCACATCACTCCCGGAG TGCCCGTTCCGCTCAGAGGTCGTAGGTCAAGACCCAAGGGACAGGAGGAG CACGACGAAGGGGATCCCGAAACTCCCGTAGAGGCAATCCTCGAGATGGT GCACTCCCCGAGCTTTCTGAATTCGGAGCATGCGCAGAGCCGTCACAGCA CCGACCCTGCATCGGCGACGGACGTTGAGGCAACACAATTTAATAATGAA CCATCATCAATCATGGATTTCGAGGACACGGTCCCGGCAGAAATGCGCAC AGAGAGCGACAGCAGTGAGAAGGAGGCCAAGACATCAACCCGCTGTATTG AAGCATTGCCAATCATGGATTTCGATGACGCATTCCTGCAGGGACTGCGT CCCGAAATCAAGCACATGAACTTCCACCAGAAGCTGTACTTCAAGCGACG TGTGTACGACCTGCTTGGCGAGATATTCCATTCCGAGCAGTCAGCCTCAT CAACCCACCCAGCGCAGCCGCATCCCAGGGAGAATGTCAATGGAACGCTA TCCACTACCTCGAGTCTCTCCTCGGCGAATCCACTACAGCACATGGGACT TATGCTGCAGCTGCCAAAGCTGGTGTCCAAGGCATCCAAAGATTTGTAGC TTGCGAACTGCTCATTGAACAGCTTTAATACACTGATATCAAATTTATGT ACAGTACATAGGACAAATAACATTTTAAGTTGTTTTTAGAAATGTTCCCA TAATGTATAAACAGAAAAATGTGAAGTTGAAACTAAATAAATAAATTTTT CTAAATTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3919-RB | 1795 | CG3919-RB | 434..1795 | 1..1362 | 6810 | 100 | Plus |
CG3919.d | 1754 | CG3919.d | 345..1225 | 1..881 | 4405 | 100 | Plus |
CG3919.a | 1563 | CG3919.a | 154..1034 | 1..881 | 4405 | 100 | Plus |
CG3919.d | 1754 | CG3919.d | 1269..1754 | 877..1362 | 2415 | 99.7 | Plus |
CG3919.a | 1563 | CG3919.a | 1078..1563 | 877..1362 | 2415 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 14402327..14402805 | 880..1358 | 2380 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 14401568..14401884 | 464..780 | 1510 | 98.4 | Plus |
chr3L | 24539361 | chr3L | 14400700..14400974 | 2..276 | 1360 | 99.6 | Plus |
chr3L | 24539361 | chr3L | 14401154..14401345 | 277..468 | 945 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 14402106..14402209 | 778..881 | 520 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 14412254..14412736 | 880..1362 | 2415 | 100 | Plus |
3L | 28110227 | 3L | 14411495..14411811 | 464..780 | 1570 | 99.7 | Plus |
3L | 28110227 | 3L | 14410626..14410901 | 1..276 | 1380 | 100 | Plus |
3L | 28110227 | 3L | 14411081..14411272 | 277..468 | 960 | 100 | Plus |
3L | 28110227 | 3L | 14412033..14412136 | 778..881 | 520 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 14405354..14405836 | 880..1362 | 2415 | 100 | Plus |
3L | 28103327 | 3L | 14404595..14404911 | 464..780 | 1570 | 99.6 | Plus |
3L | 28103327 | 3L | 14403726..14404001 | 1..276 | 1380 | 100 | Plus |
3L | 28103327 | 3L | 14404181..14404372 | 277..468 | 960 | 100 | Plus |
3L | 28103327 | 3L | 14405133..14405236 | 778..881 | 520 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rover | 7318 | rover ROVER 7318bp | 6810..6909 | 11..103 | 132 | 65.3 | Plus |
Dkoe\Gandalf | 979 | Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). | 757..909 | 1340..1188 | 116 | 54.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 14400699..14400974 | 1..276 | 99 | -> | Plus |
chr3L | 14401154..14401345 | 277..468 | 99 | -> | Plus |
chr3L | 14401573..14401883 | 469..779 | 98 | -> | Plus |
chr3L | 14402108..14402209 | 780..881 | 100 | -> | Plus |
chr3L | 14402329..14402775 | 882..1328 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3919-RB | 1..909 | 291..1199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3919-RB | 1..909 | 291..1199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3919-RB | 1..909 | 291..1199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3919-RB | 1..909 | 291..1199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3919-RB | 1..909 | 291..1199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3919-RB | 1..1358 | 1..1358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3919-RB | 1..1358 | 1..1358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3919-RB | 1..1358 | 1..1358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3919-RB | 1..1358 | 1..1358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3919-RB | 1..1358 | 1..1358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14410626..14410901 | 1..276 | 100 | -> | Plus |
3L | 14411081..14411272 | 277..468 | 100 | -> | Plus |
3L | 14411500..14411810 | 469..779 | 100 | -> | Plus |
3L | 14412035..14412136 | 780..881 | 100 | -> | Plus |
3L | 14412256..14412732 | 882..1358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14410626..14410901 | 1..276 | 100 | -> | Plus |
3L | 14411081..14411272 | 277..468 | 100 | -> | Plus |
3L | 14411500..14411810 | 469..779 | 100 | -> | Plus |
3L | 14412035..14412136 | 780..881 | 100 | -> | Plus |
3L | 14412256..14412732 | 882..1358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14410626..14410901 | 1..276 | 100 | -> | Plus |
3L | 14411081..14411272 | 277..468 | 100 | -> | Plus |
3L | 14411500..14411810 | 469..779 | 100 | -> | Plus |
3L | 14412035..14412136 | 780..881 | 100 | -> | Plus |
3L | 14412256..14412732 | 882..1358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 14403726..14404001 | 1..276 | 100 | -> | Plus |
arm_3L | 14404181..14404372 | 277..468 | 100 | -> | Plus |
arm_3L | 14404600..14404910 | 469..779 | 100 | -> | Plus |
arm_3L | 14405135..14405236 | 780..881 | 100 | -> | Plus |
arm_3L | 14405356..14405832 | 882..1358 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14403726..14404001 | 1..276 | 100 | -> | Plus |
3L | 14404181..14404372 | 277..468 | 100 | -> | Plus |
3L | 14404600..14404910 | 469..779 | 100 | -> | Plus |
3L | 14405135..14405236 | 780..881 | 100 | -> | Plus |
3L | 14405356..14405832 | 882..1358 | 100 | Plus |
Translation from 2 to 1198
> LD17773.hyp RISLVLMCFKIKNNCYLKLQHSFTTASLVGSSTKSQCSKLLNTCNSSNSG VHANNCRVHGSNERLEPELNKPKLVIKALTSINWSIFKPNSLFIYEMNTR RRSIAPPPNVYAINAKICHLVKLHPCLYDRHDDNYLRKSTVKNAWKEISN EMRNSVKSCKERWRNIRSSYARSIKLHHGANTYYLNSELKFLQKHITPGV PVPLRGRRSRPKGQEEHDEGDPETPVEAILEMVHSPSFLNSEHAQSRHST DPASATDVEATQFNNEPSSIMDFEDTVPAEMRTESDSSEKEAKTSTRCIE ALPIMDFDDAFLQGLRPEIKHMNFHQKLYFKRRVYDLLGEIFHSEQSASS THPAQPHPRENVNGTLSTTSSLSSANPLQHMGLMLQLPKLVSKASKDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3919-PB | 302 | CG3919-PB | 1..302 | 97..398 | 1591 | 100 | Plus |
CG3919-PC | 318 | CG3919-PC | 1..318 | 97..398 | 1564 | 95 | Plus |
CG4404-PA | 308 | CG4404-PA | 15..98 | 114..192 | 178 | 38.1 | Plus |
CG3838-PB | 435 | CG3838-PB | 58..140 | 114..192 | 165 | 41 | Plus |
CG3838-PA | 435 | CG3838-PA | 58..140 | 114..192 | 165 | 41 | Plus |
Translation from 20 to 1198
> LD17773.pep MCFKIKNNCYLKLQHSFTTASLVGSSTKSQCSKLLNTCNSSNSGVHANNC RVHGSNERLEPELNKPKLVIKALTSINWSIFKPNSLFIYEMNTRRRSIAP PPNVYAINAKICHLVKLHPCLYDRHDDNYLRKSTVKNAWKEISNEMRNSV KSCKERWRNIRSSYARSIKLHHGANTYYLNSELKFLQKHITPGVPVPLRG RRSRPKGQEEHDEGDPETPVEAILEMVHSPSFLNSEHAQSRHSTDPASAT DVEATQFNNEPSSIMDFEDTVPAEMRTESDSSEKEAKTSTRCIEALPIMD FDDAFLQGLRPEIKHMNFHQKLYFKRRVYDLLGEIFHSEQSASSTHPAQP HPRENVNGTLSTTSSLSSANPLQHMGLMLQLPKLVSKASKDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24603-PA | 302 | GF24603-PA | 1..298 | 91..391 | 880 | 57.1 | Plus |
Dana\GF20883-PA | 333 | GF20883-PA | 8..93 | 106..186 | 182 | 38.4 | Plus |
Dana\GF15373-PA | 460 | GF15373-PA | 137..242 | 107..205 | 178 | 38.7 | Plus |
Dana\GF22772-PA | 437 | GF22772-PA | 60..143 | 107..186 | 162 | 40.5 | Plus |
Dana\GF25200-PA | 960 | GF25200-PA | 5..96 | 108..190 | 156 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15683-PA | 238 | GG15683-PA | 1..197 | 91..287 | 866 | 83.4 | Plus |
Dere\GG19531-PA | 313 | GG19531-PA | 8..148 | 106..222 | 201 | 32.6 | Plus |
Dere\GG21572-PA | 459 | GG21572-PA | 137..242 | 107..205 | 169 | 37.7 | Plus |
Dere\GG10039-PA | 452 | GG10039-PA | 71..154 | 107..186 | 167 | 40.5 | Plus |
Dere\GG13727-PA | 1013 | GG13727-PA | 3..97 | 103..190 | 159 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17100-PA | 369 | GH17100-PA | 46..369 | 102..392 | 547 | 41.4 | Plus |
Dgri\GH10040-PA | 369 | GH10040-PA | 46..369 | 102..392 | 547 | 41.4 | Plus |
Dgri\GH17618-PA | 356 | GH17618-PA | 8..93 | 106..186 | 187 | 39.5 | Plus |
Dgri\GH14459-PA | 1131 | GH14459-PA | 4..97 | 105..190 | 167 | 33 | Plus |
Dgri\GH10671-PA | 438 | GH10671-PA | 68..151 | 107..186 | 163 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3919-PB | 302 | CG3919-PB | 1..302 | 91..392 | 1591 | 100 | Plus |
CG3919-PC | 318 | CG3919-PC | 1..318 | 91..392 | 1564 | 95 | Plus |
CG4404-PA | 308 | CG4404-PA | 15..98 | 108..186 | 178 | 38.1 | Plus |
brwl-PB | 435 | CG3838-PB | 58..140 | 108..186 | 165 | 41 | Plus |
brwl-PA | 435 | CG3838-PA | 58..140 | 108..186 | 165 | 41 | Plus |
CG10949-PB | 459 | CG10949-PB | 137..242 | 107..205 | 163 | 35.8 | Plus |
CG10949-PA | 459 | CG10949-PA | 137..242 | 107..205 | 163 | 35.8 | Plus |
stwl-PC | 1037 | CG3836-PC | 7..228 | 107..302 | 158 | 23 | Plus |
stwl-PA | 1037 | CG3836-PA | 7..228 | 107..302 | 158 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11704-PA | 367 | GI11704-PA | 32..133 | 102..200 | 347 | 59.8 | Plus |
Dmoj\GI11704-PA | 367 | GI11704-PA | 241..367 | 249..392 | 256 | 44.2 | Plus |
Dmoj\GI16274-PA | 406 | GI16274-PA | 8..93 | 106..186 | 182 | 39.5 | Plus |
Dmoj\GI13601-PA | 1007 | GI13601-PA | 2..99 | 103..193 | 162 | 31.6 | Plus |
Dmoj\GI11040-PA | 462 | GI11040-PA | 78..161 | 107..186 | 159 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21014-PA | 286 | GL21014-PA | 23..257 | 96..367 | 460 | 40.7 | Plus |
Dper\GL22959-PA | 362 | GL22959-PA | 8..93 | 106..186 | 185 | 39.5 | Plus |
Dper\GL18916-PA | 444 | GL18916-PA | 58..141 | 107..186 | 165 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17773-PA | 286 | GA17773-PA | 23..257 | 96..367 | 457 | 40.4 | Plus |
Dpse\GA18161-PA | 341 | GA18161-PA | 8..93 | 106..186 | 185 | 39.5 | Plus |
Dpse\GA17722-PA | 445 | GA17722-PA | 58..141 | 107..186 | 164 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25465-PA | 306 | GM25465-PA | 5..306 | 87..392 | 1344 | 82.4 | Plus |
Dsec\GM11525-PA | 299 | GM11525-PA | 8..93 | 106..186 | 185 | 36 | Plus |
Dsec\GM23328-PA | 459 | GM23328-PA | 137..242 | 107..205 | 170 | 37.7 | Plus |
Dsec\GM17547-PA | 441 | GM17547-PA | 64..147 | 107..186 | 167 | 40.5 | Plus |
Dsec\GM24548-PA | 636 | GM24548-PA | 7..97 | 107..190 | 154 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24528-PA | 224 | GD24528-PA | 8..93 | 106..186 | 188 | 36 | Plus |
Dsim\GD21703-PA | 459 | GD21703-PA | 137..242 | 107..205 | 170 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11378-PA | 358 | GJ11378-PA | 20..358 | 86..392 | 582 | 42.2 | Plus |
Dvir\GJ13939-PA | 1077 | GJ13939-PA | 2..97 | 103..191 | 173 | 34.4 | Plus |
Dvir\GJ18309-PA | 449 | GJ18309-PA | 68..151 | 107..186 | 164 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12702-PA | 371 | GK12702-PA | 11..118 | 102..204 | 364 | 61.1 | Plus |
Dwil\GK12702-PA | 371 | GK12702-PA | 244..370 | 284..391 | 263 | 46.5 | Plus |
Dwil\GK16390-PA | 377 | GK16390-PA | 8..93 | 106..186 | 200 | 40.7 | Plus |
Dwil\GK23864-PA | 441 | GK23864-PA | 71..154 | 107..186 | 169 | 40.5 | Plus |
Dwil\GK10331-PA | 1064 | GK10331-PA | 5..95 | 107..190 | 166 | 35.2 | Plus |
Dwil\GK18122-PA | 430 | GK18122-PA | 145..250 | 107..205 | 159 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22013-PA | 321 | GE22013-PA | 1..321 | 91..392 | 1237 | 78.9 | Plus |
Dyak\GE16190-PA | 334 | GE16190-PA | 8..93 | 106..186 | 190 | 38.4 | Plus |
Dyak\GE12593-PA | 459 | GE12593-PA | 112..242 | 82..205 | 171 | 32.8 | Plus |
Dyak\GE18854-PA | 445 | GE18854-PA | 69..152 | 107..186 | 167 | 40.5 | Plus |
Dyak\GE20022-PA | 1023 | GE20022-PA | 3..97 | 103..190 | 159 | 33.7 | Plus |