LD17911.complete Sequence
858 bp (858 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061236
> LD17911.complete
GCAAAAATCAGGAATTCGACTTCGAGATGCTGAAGCGCGATCTGCAGAAA
ATCACACTCAAGCTGTCCGATCTCAAGGACTATGAGGTTGCCCGCCAAAA
GAACAAGTTAAAGGGCGCCCCGCGACCTAGGCTTTCTCAGGACGCCCTCC
CCGGAGACGACGCCTCCACTTCGGGAACAACGGCAAGTTGCAGTTCCAAC
ACGGAAACGGCCACGGAAACCGCATCGGGATCCGGATCAGGGTCTGGATC
GGGCTCGGGTTCTGGGTCCGGGTCGTACATTACGGGAATGGGCTACCGTT
CGGAGACACCCTCCTCCGCATCGTACACCACGTCGACGACCCCGACTCCG
GCCACTCAGGAGGAGATACTGAGACCCTCGTCCGCCGTCACGGCCACCAC
AACCACTGGCACCACTAATTCCGGCTCCACGGATGACGTGAGCGTGGCGG
CCGTAGTGGATGACACGGATACCATTGACGAAATCAGCGATGACAACTGG
GTGGACCTGAATGCGGACACCAACGATACCGTTGATACCCAGCCGGAGGA
GCAGGACCAACTGCAAGAGGTGGAGGAGGAGGATGGGGCTAGGGGAGGAG
TGTAATCCTGACCGCTTATCGCGTTATGAAAACATAGCGCAGCTGCACTC
AAAGCCCACCCCCCCCCCCCCCATTTCACATTCCATTTATCATAACAATT
TGTATACGTAAACAAGTATAATAACCCATTGCATGCTCCACTTACCTAGC
TGCTAATAATAATAGTTTGCAAGGTTATATGTCGCTTATGTCATCTTCAA
ATCGAAACATATGCATTTTATAGATTTGGTTAACTACGGTAAAAAAAAAA
AAAAAAAA
LD17911.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:10:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3457-RA | 894 | CG3457-RA | 50..892 | 1..843 | 4215 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:52:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 2081803..2082642 | 1..840 | 4200 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:05:21 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:52:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2187871..2188713 | 1..843 | 4215 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:34:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 2195969..2196811 | 1..843 | 4215 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-15 15:52:29 has no hits.
LD17911.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:54:21 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 2081803..2082642 | 1..840 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:52:31 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3457-RA | 1..579 | 27..605 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:48:19 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3457-RA | 1..579 | 27..605 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:44:32 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3457-RA | 1..579 | 27..605 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:17:01 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3457-RA | 1..579 | 27..605 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:19:40 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3457-RA | 1..579 | 27..605 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:32:18 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3457-RA | 50..889 | 1..840 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:48:19 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3457-RA | 50..889 | 1..840 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:44:32 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3457-RA | 52..891 | 1..840 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:17:01 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3457-RA | 50..889 | 1..840 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:19:40 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3457-RA | 52..891 | 1..840 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:54:21 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2187871..2188710 | 1..840 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:54:21 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2187871..2188710 | 1..840 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:54:21 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2187871..2188710 | 1..840 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:44:32 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2081904..2082743 | 1..840 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:53:59 Download gff for
LD17911.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2195969..2196808 | 1..840 | 100 | | Plus |
LD17911.hyp Sequence
Translation from 2 to 604
> LD17911.hyp
KNQEFDFEMLKRDLQKITLKLSDLKDYEVARQKNKLKGAPRPRLSQDALP
GDDASTSGTTASCSSNTETATETASGSGSGSGSGSGSGSGSYITGMGYRS
ETPSSASYTTSTTPTPATQEEILRPSSAVTATTTTGTTNSGSTDDVSVAA
VVDDTDTIDEISDDNWVDLNADTNDTVDTQPEEQDQLQEVEEEDGARGGV
*
LD17911.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:20:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3457-PB | 192 | CG3457-PB | 1..192 | 9..200 | 970 | 100 | Plus |
CG3457-PA | 192 | CG3457-PA | 1..192 | 9..200 | 970 | 100 | Plus |
LD17911.pep Sequence
Translation from 26 to 604
> LD17911.pep
MLKRDLQKITLKLSDLKDYEVARQKNKLKGAPRPRLSQDALPGDDASTSG
TTASCSSNTETATETASGSGSGSGSGSGSGSGSYITGMGYRSETPSSASY
TTSTTPTPATQEEILRPSSAVTATTTTGTTNSGSTDDVSVAAVVDDTDTI
DEISDDNWVDLNADTNDTVDTQPEEQDQLQEVEEEDGARGGV*
LD17911.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:06:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF22202-PA | 201 | GF22202-PA | 1..166 | 1..171 | 427 | 71.6 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:06:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG12919-PA | 198 | GG12919-PA | 1..197 | 1..191 | 605 | 87.8 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:06:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH12441-PA | 130 | GH12441-PA | 1..128 | 1..191 | 194 | 36.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:20:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3457-PB | 192 | CG3457-PB | 1..192 | 1..192 | 970 | 100 | Plus |
CG3457-PA | 192 | CG3457-PA | 1..192 | 1..192 | 970 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:06:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL13328-PA | 150 | GL13328-PA | 1..149 | 1..191 | 280 | 50 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:06:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA17463-PA | 150 | GA17463-PA | 1..149 | 1..191 | 284 | 50.5 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:06:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19210-PA | 192 | GM19210-PA | 1..192 | 1..192 | 946 | 98.4 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:06:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ16966-PA | 128 | GJ16966-PA | 1..126 | 1..191 | 226 | 39.2 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:06:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK16060-PA | 184 | GK16060-PA | 1..181 | 1..191 | 174 | 36 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:06:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16247-PA | 201 | GE16247-PA | 1..185 | 1..179 | 586 | 89.2 | Plus |