BDGP Sequence Production Resources |
Search the DGRC for LD17982
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 179 |
Well: | 82 |
Vector: | pBS SK- |
Associated Gene/Transcript | Atac2-RA |
Protein status: | LD17982.pep: gold |
Preliminary Size: | 2416 |
Sequenced Size: | 2445 |
Gene | Date | Evidence |
---|---|---|
CG10414 | 2001-01-01 | Release 2 assignment |
CG10414 | 2002-05-23 | Blastp of sequenced clone |
CG10414 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10414 | 2008-04-29 | Release 5.5 accounting |
CG10414 | 2008-08-15 | Release 5.9 accounting |
CG10414 | 2008-12-18 | 5.12 accounting |
2445 bp (2445 high quality bases) assembled on 2002-05-23
GenBank Submission: AY118521
> LD17982.complete CACAAACAACACATTATTTTGTTGATTGTTTTTAACTTGCAATTTGTGCT GTTTTACTGAGTAAATGAATCGGCCCAGTAACTGGGATGATCCCCAGGGA CCATGCCGCTACTGTGAATCGCCGGTGGAGGACGACAACTACCTGGAGTG CCAGGAATGCAGGCGGATGGTTCACATCAAATGCCTGCCGCATGCTTGCA CGCCCGGAGATCTTTTAGGCGACGTTTTCTTCGAGTTCACGTGCGTCAAG TGTGTGCTGGATAAAGCTAAGGAATCGGTCATACCCTCAGATCTAGAACC CATTAAGGAAGTGATCGTGCGCCAAAGGATACCTTGGCTGCTGGTGCTCA CCCTAACGCTCTACAATCTGTCCATCAAACAAAAGGGCTTGGGACACCAT GGATTCTTCCATTGGCGCACGCACATCATCAGTTTTGTGGACAAGAACTG GAACTATATATTCGGTCCCAATGTGCGGCGTCGCAAGCAATGGACTGGTT CCGTATCCGGCGCACTGTCCCACAACAGTCCGGAGTACTTTCAGTCTGGT CTGGATGTCTTTCAGGAGAACGGCTGGTGGAAACTGGCCAAGCCCTTTCA AACCCCAAGAAGCGTTCTCAAAGAATATGAGAAAAAGCAACAGTTGCGGC TACAAATGCGTATTGAAAAGCGGTTGCCTGCAGCGGACGAGACCAGCTGT AGCAGCGAGATCTCAGTGGCGGATCATGCCCAGGATAACCCACCGCTTAT TAAAGCAGAAGCTGAGAAACCCAGTTCAACAGAGGGCTGTGCGCGAACAA TTCCCTACATGGGCCGTTTGCCAAAGATACAAACACAACCTTCACCCTTG TCACAGGAAACGCTTCCAGGGCCACCAATTCTTCAAGAAAATATAGCGCC ACCAAGTCAGAAGGAGGAAGAACCACAGAATCAGCCTATGAGCATGGTCC AAGCAGGCCTGATGGATTTTCTGGCTGAAAGTTTGGAAAGCGATGATTTT ACCATGTTTGGTAACCTACCAGGCATAATGCCCCCACCCCTGATTGGAGC GGGTAAAAATGATTTCTTCATGACCGAGCCGTTGCTTCACGCACCTTTGA ATAATGAAGGTCTTTTCGACATGGATACAAATTTTGCCATACCAAATACC GCTGATGAGACCAAACCCATATCAACAGAAGAACCTGCAGCCGAAAGCAG CGAGGAACAAAAAGAAGGCGAGGTAGAAGATGAAAAGCCAGAAGAGGACG AATCACCCGACTATCAGCCACGCATCGTACAGGTTACAAATTACCAGGCG CAAGAGGCAAACGAAAGCATCAAAGAGGAACCACTAGAAGAGATAATGCA AGATGATGACGTCACGACAAATAGCAAATCCTCTATCCTAGAGCCTTGCA AACCGAGTGGATTTGTCAGACAACCACGGCGAAATTGGCCCTGGTTGCAG GAGGCGCAGGATCCCGATGACATGGCCATTCCTAGCGAAAATCTCAAACT AATAAATGCATACGAAGAACAGAAGTTGTACCAGCGACTCGATAGAATAT TCGCACTGGAGCATCAGTGCCACATATCCATACCTGCCTATGTGCGGCGC CTATATCGAAAACTTTCTCTTCGAAAATGGAAAAGGGACCACAATCGACA CATATTTAACTTGGACGAGCACATAGATCCCCTGGGAAGAGCACGCCTAA AGATGCTGGGTCATCAGAAGGCCGAAATTCTTGACAGATATCAGTTGTTA GCCCATTCACGACAAGATGCAAGGAGCTCCTTTCACGCCCGCCTGGCGGG ATGCACTCAATACGAGCTCTTTGAATCGCCCTACTCTCAAAGAGTTCTTC ATCCATTTATCTTTCGGAGCGAAACGATGGCTCCTCCATGGCTGAAGCTT ATGTGCGAGCTGCAGCATAGAGTAAACGGATCTCATCCCACAAGATCTAC CATCGACTTCTGTTTTGTGAGACCGCAGCATATTCCGGCCGTAAACGCAT TACTCCAAAGTACTTTTTGGCCAAACATTGATGTAAGCGAGTGTTTGAGC TACCCGGACTACAGTGTAGTGGCGTTGTACAAGAAACTGGTCATCGGTTG CGGATTCCTAGTGCCCGACGTAGGTTACAACGAGGCCTACATCTCATTCA TGGCGGTGCGGCCGTGCTGGCAACGCAGTGGCATCGCCAGCTTCATGTTA TATCACCTTATCCAGACATGTATGTCCAAGGACATAACGTTGCACGTTTC CGCCACCAACGCGGCCGTCATGTTGTACCAGAAATTCGGATTTAAGATGG AGGAAATCATCTTGGACTTTTATGACAAGTATCTGCCTCTGGACTCGAAA CAGAGCAGAAATGCCTTCTTTTTGAGATTACAAAGATGAGACTTTTTTCA AATAAATGGTTTATGAATCTAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10414-RA | 2445 | CG10414-RA | 22..2444 | 1..2423 | 12115 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 18608739..18609970 | 2033..802 | 5980 | 99 | Minus |
chr2L | 23010047 | chr2L | 18610478..18610952 | 475..1 | 2375 | 100 | Minus |
chr2L | 23010047 | chr2L | 18608286..18608673 | 2420..2033 | 1910 | 99.5 | Minus |
chr2L | 23010047 | chr2L | 18610037..18610211 | 801..627 | 875 | 100 | Minus |
chr2L | 23010047 | chr2L | 18610267..18610418 | 626..475 | 760 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18610029..18611260 | 2033..802 | 6160 | 100 | Minus |
2L | 23513712 | 2L | 18611768..18612242 | 475..1 | 2375 | 100 | Minus |
2L | 23513712 | 2L | 18609573..18609963 | 2423..2033 | 1955 | 100 | Minus |
2L | 23513712 | 2L | 18611327..18611501 | 801..627 | 875 | 100 | Minus |
2L | 23513712 | 2L | 18611557..18611708 | 626..475 | 760 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18610029..18611260 | 2033..802 | 6160 | 100 | Minus |
2L | 23513712 | 2L | 18611768..18612242 | 475..1 | 2375 | 100 | Minus |
2L | 23513712 | 2L | 18609573..18609963 | 2423..2033 | 1955 | 100 | Minus |
2L | 23513712 | 2L | 18611327..18611501 | 801..627 | 875 | 100 | Minus |
2L | 23513712 | 2L | 18611557..18611708 | 626..475 | 760 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 18608286..18608672 | 2034..2420 | 99 | <- | Minus |
chr2L | 18608739..18609970 | 802..2033 | 99 | <- | Minus |
chr2L | 18610037..18610211 | 627..801 | 100 | <- | Minus |
chr2L | 18610267..18610418 | 475..626 | 100 | <- | Minus |
chr2L | 18610479..18610952 | 1..474 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10414-RA | 1..2325 | 65..2389 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10414-RA | 1..2325 | 65..2389 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atac2-RA | 1..2325 | 65..2389 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10414-RA | 1..2325 | 65..2389 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atac2-RA | 1..2325 | 65..2389 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10414-RA | 1..2420 | 1..2420 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10414-RA | 1..2420 | 1..2420 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atac2-RA | 8..2427 | 1..2420 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10414-RA | 1..2420 | 1..2420 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Atac2-RA | 8..2427 | 1..2420 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18609576..18609962 | 2034..2420 | 100 | <- | Minus |
2L | 18610029..18611260 | 802..2033 | 100 | <- | Minus |
2L | 18611327..18611501 | 627..801 | 100 | <- | Minus |
2L | 18611557..18611708 | 475..626 | 100 | <- | Minus |
2L | 18611769..18612242 | 1..474 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18609576..18609962 | 2034..2420 | 100 | <- | Minus |
2L | 18610029..18611260 | 802..2033 | 100 | <- | Minus |
2L | 18611327..18611501 | 627..801 | 100 | <- | Minus |
2L | 18611557..18611708 | 475..626 | 100 | <- | Minus |
2L | 18611769..18612242 | 1..474 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18609576..18609962 | 2034..2420 | 100 | <- | Minus |
2L | 18610029..18611260 | 802..2033 | 100 | <- | Minus |
2L | 18611327..18611501 | 627..801 | 100 | <- | Minus |
2L | 18611557..18611708 | 475..626 | 100 | <- | Minus |
2L | 18611769..18612242 | 1..474 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 18609576..18609962 | 2034..2420 | 100 | <- | Minus |
arm_2L | 18610029..18611260 | 802..2033 | 100 | <- | Minus |
arm_2L | 18611327..18611501 | 627..801 | 100 | <- | Minus |
arm_2L | 18611557..18611708 | 475..626 | 100 | <- | Minus |
arm_2L | 18611769..18612242 | 1..474 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18609576..18609962 | 2034..2420 | 100 | <- | Minus |
2L | 18610029..18611260 | 802..2033 | 100 | <- | Minus |
2L | 18611327..18611501 | 627..801 | 100 | <- | Minus |
2L | 18611557..18611708 | 475..626 | 100 | <- | Minus |
2L | 18611769..18612242 | 1..474 | 100 | Minus |
Translation from 64 to 2388
> LD17982.pep MNRPSNWDDPQGPCRYCESPVEDDNYLECQECRRMVHIKCLPHACTPGDL LGDVFFEFTCVKCVLDKAKESVIPSDLEPIKEVIVRQRIPWLLVLTLTLY NLSIKQKGLGHHGFFHWRTHIISFVDKNWNYIFGPNVRRRKQWTGSVSGA LSHNSPEYFQSGLDVFQENGWWKLAKPFQTPRSVLKEYEKKQQLRLQMRI EKRLPAADETSCSSEISVADHAQDNPPLIKAEAEKPSSTEGCARTIPYMG RLPKIQTQPSPLSQETLPGPPILQENIAPPSQKEEEPQNQPMSMVQAGLM DFLAESLESDDFTMFGNLPGIMPPPLIGAGKNDFFMTEPLLHAPLNNEGL FDMDTNFAIPNTADETKPISTEEPAAESSEEQKEGEVEDEKPEEDESPDY QPRIVQVTNYQAQEANESIKEEPLEEIMQDDDVTTNSKSSILEPCKPSGF VRQPRRNWPWLQEAQDPDDMAIPSENLKLINAYEEQKLYQRLDRIFALEH QCHISIPAYVRRLYRKLSLRKWKRDHNRHIFNLDEHIDPLGRARLKMLGH QKAEILDRYQLLAHSRQDARSSFHARLAGCTQYELFESPYSQRVLHPFIF RSETMAPPWLKLMCELQHRVNGSHPTRSTIDFCFVRPQHIPAVNALLQST FWPNIDVSECLSYPDYSVVALYKKLVIGCGFLVPDVGYNEAYISFMAVRP CWQRSGIASFMLYHLIQTCMSKDITLHVSATNAAVMLYQKFGFKMEEIIL DFYDKYLPLDSKQSRNAFFLRLQR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14837-PA | 763 | GF14837-PA | 3..763 | 11..774 | 2877 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21701-PA | 774 | GG21701-PA | 1..774 | 1..774 | 3734 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10527-PA | 275 | GH10527-PA | 13..259 | 14..262 | 867 | 64.3 | Plus |
Dgri\GH10528-PA | 162 | GH10528-PA | 1..162 | 613..774 | 808 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Atac2-PA | 774 | CG10414-PA | 1..774 | 1..774 | 4156 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17195-PA | 780 | GI17195-PA | 1..780 | 1..774 | 2493 | 63.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18740-PA | 758 | GL18740-PA | 14..758 | 14..774 | 2430 | 62 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10303-PA | 797 | GA10303-PA | 14..797 | 14..774 | 2640 | 65.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17081-PA | 774 | GM17081-PA | 1..774 | 1..774 | 3918 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21826-PA | 774 | GD21826-PA | 1..774 | 1..774 | 3930 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19801-PA | 776 | GJ19801-PA | 4..776 | 5..774 | 2440 | 62.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24653-PA | 749 | GK24653-PA | 3..749 | 14..774 | 2656 | 66.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12724-PA | 775 | GE12724-PA | 1..775 | 1..774 | 3784 | 89.9 | Plus |
Translation from 64 to 2388
> LD17982.hyp MNRPSNWDDPQGPCRYCESPVEDDNYLECQECRRMVHIKCLPHACTPGDL LGDVFFEFTCVKCVLDKAKESVIPSDLEPIKEVIVRQRIPWLLVLTLTLY NLSIKQKGLGHHGFFHWRTHIISFVDKNWNYIFGPNVRRRKQWTGSVSGA LSHNSPEYFQSGLDVFQENGWWKLAKPFQTPRSVLKEYEKKQQLRLQMRI EKRLPAADETSCSSEISVADHAQDNPPLIKAEAEKPSSTEGCARTIPYMG RLPKIQTQPSPLSQETLPGPPILQENIAPPSQKEEEPQNQPMSMVQAGLM DFLAESLESDDFTMFGNLPGIMPPPLIGAGKNDFFMTEPLLHAPLNNEGL FDMDTNFAIPNTADETKPISTEEPAAESSEEQKEGEVEDEKPEEDESPDY QPRIVQVTNYQAQEANESIKEEPLEEIMQDDDVTTNSKSSILEPCKPSGF VRQPRRNWPWLQEAQDPDDMAIPSENLKLINAYEEQKLYQRLDRIFALEH QCHISIPAYVRRLYRKLSLRKWKRDHNRHIFNLDEHIDPLGRARLKMLGH QKAEILDRYQLLAHSRQDARSSFHARLAGCTQYELFESPYSQRVLHPFIF RSETMAPPWLKLMCELQHRVNGSHPTRSTIDFCFVRPQHIPAVNALLQST FWPNIDVSECLSYPDYSVVALYKKLVIGCGFLVPDVGYNEAYISFMAVRP CWQRSGIASFMLYHLIQTCMSKDITLHVSATNAAVMLYQKFGFKMEEIIL DFYDKYLPLDSKQSRNAFFLRLQR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Atac2-PA | 774 | CG10414-PA | 1..774 | 1..774 | 4156 | 100 | Plus |