BDGP Sequence Production Resources |
Search the DGRC for LD18233
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 182 |
Well: | 33 |
Vector: | pBS SK- |
Associated Gene/Transcript | Pbp95-RA |
Protein status: | LD18233.pep: gold |
Preliminary Size: | 2969 |
Sequenced Size: | 2635 |
Gene | Date | Evidence |
---|---|---|
CG2702 | 2001-01-01 | Release 2 assignment |
CG2702 | 2001-10-10 | Blastp of sequenced clone |
CG2702 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2702 | 2008-04-29 | Release 5.5 accounting |
Pbp95 | 2008-08-15 | Release 5.9 accounting |
Pbp95 | 2008-12-18 | 5.12 accounting |
2635 bp (2635 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061240
> LD18233.complete AAACAACCTGAGCAATGGACGATGCCGATGATCTGCGCATAAACCAGCAG CAGCTTATGGACGAGATTTCGGCCCTCTTGCAGAACACAGCGAAGCCGAG CGCCGCCAACGCACTGCAGCTGAATCAGGAGCTCCAGCGCCGGCTCATGC AAGTCCGGACCAAAATTCTGGCCATGTTACAAGTAGTAAGGGCCCGCTTC TCTCGGAACGAGGACATCCTGGTGCGCCGGCTGCGACCTCGTTCCCATTT CGGCCCGAATTCCCTCAATCTTAGCGGGGCGATCCTGCGGAAGGGCACGT TTCGCTTCAAGGGCAACCTGTTTTTCCGAGACATCGATGGTCGAAGCTGT CCTAACAACGAGGATTACGAGGCGCGGTGCCACACGGAGATGTTTCCCAC CGACTTTGACATGCACTCCAGACATGTATGGACATTGCTAGACAAAAAGA ATGTGATAATGGGTATAAAACAACAGTTACTGGAGCATAGGGCCCACAGT ACGAATGCGCTGCCCAGCGGAAGCCTGAAGCGCAAGCCAATCGAGCGACA CTTAAGTACACTGGTAAGTCTGCTGGCAACTGCGGATAGTAGCTTCAGCA TCGACTGGAACCAGATCAGCACCCTGGACTTGGAATATCGGCACTCACCA TATAGCTGTGAGGCAATGTGGAGGGTCTACTTAACACCAGATCTCAGGCG AGACGATTGGTCACCCGAGGAGGACGAAACTTTACTGGCGGTGGCCACTG CGAACAGGATGCAGAACTGGGAGTTGATAGCCGCGTCGCTAGACCGACGT TCCGACTATCAGTGCTTCGTACGCTTTCATACCGCCCTACGTTTTCTGCT GGAGCCAAAGAACAGCCACCGCTGGAGCGAAGAGGACAACGATAAACTAA GGGCGATCGTTGATAGGAATACGGCAAACAGTGTAATAAACTGGAAAAAA GTCGTGGAATACTTCCCGGACAAGTCCAAATCAACGCTGATTGGTCGTTA CTACTACGTGTTGCATCCTAGCATCAGTCACGAACCCTTCACTACCAAGG AGGACATGATGCTGTTCGCCGCCGTTGAAGAGTACAATGGAAAGTTTCAC TGTTTTCCGCGTTCTCTTTTCCCAAACCGGTCGTTAACCCAACTCCGAAC TCGCTACCACAATGTACTGGCACAACGCAACAAGACCGACTCCTGGTCCG TTCAGGACGACACACGGCTGATGAGCTTCGTAACGCAATACGGGGCTTCC CAGTGGCTTAACTGTGCCACGTTCTTGGGCAATCACACGCGGACCAGCTG TCGAACCCGCTTCCTAGTCATCAAGAAATTCCTTGAACAAAATCCCAATG CAAAAGTGGAAGACCTGCCACGCCGCCGATCGAAGAAGGTGTCCTTGGTT AACTCTGATAACTGGGCGCAGCGTTTGCAAGAGTGGCAAGAGGACCCAGA GTCATTAGTTAATGATAACCCCCCGAAAGGAACTCGGGTGCGCGGTCCCA AATCGAAAAAGGCTAGGATCGAGCGACAGGCAGAGAGTTTCTCAAGACTT TCGAAAGTTGATATAGAGTTCTGCAACTTCTTTAAGTTTAGTTATAATCT GACGCTGAGCACTCCAAAAACTTTTCCAGTTCCAAAAGACGTTTATAACC TTGCCTACGTGATCAGAGCTCTTGCATATAAGCCACCAATTCGACCCTCG CTCTTACAAAACATATTTATGCCAAATGATGTGCTTAAGTGCTACAACAG CATGATCCGAAACCTTCCGGACGAGGAAGGTGATATGAAGAGCCCACTTT TGCCACCCAACTGGTCAACTATGATGGGGTTTCGAGCCTTATGCATTCTT TCCGGAGATTGTCGCAAGGATACGGAAACACGTAGCTTCGAATACAATGA ATCTTTACCACCCATCCAGCTTTTCCGCAAGCGGTTGCAAGCTCTTTTCT ATCGTACCACTCTTCTCAGCCGCTTGGAATCACAACTCTTTACGGACTTA CCATCAGCATTAGTTTCTTTACCACGCCCCAAACACGATTATGCAAAAAT GGGTACACATGTTGAATTAATCGATCCAGAGCCGGCACCACAGAATGATC TAAAATCCGAGCCGCTTAGCGAGAATGAAGTGATTAATACAGTCAAGCAG GAATTGGAAATGGAATATACAGTTCCATAGGAACTAATAAGTAAATATGT AATATTGATTAATTTAAGCTTTAAAAGTTTATATTTTTTACTTCATATCG CGTTATATAATAGTTCATTACAATGGCTAACAAATAATTTATAAACTTGT AGGTACTTTTAACGTATTTCACATACAGCAAAATCAAATGCCGGACCGAT GTGCATTAGGGTGGCTCATTTTTCTGATTGTAGTTTAAAAATATTGCTTA GGTTTGAAAAAAGGTATATTTATAGCAAAACGCCCTGCAAAACGAAACAA TTTAATACACAAGCAGTCAAAAAAACTAATGTATATTTTAGTTGCCGTTT TACAATCCTTTCAAAACTTTTATCCCGGATATTTAGTTATTAGAGCAAAA TTGTCTAAACCTTATTTTCAATATAAAAAGAACCGATCCATCCTATTGTT CATGCGGTAACAATGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pbp95-RA | 2739 | Pbp95-RA | 92..2708 | 1..2617 | 13085 | 100 | Plus |
CG2747-RD | 7009 | CG2747-RD | 6608..7009 | 2617..2216 | 2010 | 100 | Minus |
CG2747-RB | 7042 | CG2747-RB | 6641..7042 | 2617..2216 | 2010 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 3841070..3842654 | 1032..2616 | 7925 | 100 | Plus |
chr3R | 27901430 | chr3R | 3840452..3841010 | 474..1032 | 2795 | 100 | Plus |
chr3R | 27901430 | chr3R | 3839868..3840343 | 1..476 | 2380 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 7755857..7757442 | 1032..2617 | 7930 | 100 | Plus |
3R | 31820162 | 3R | 7755239..7755797 | 474..1032 | 2795 | 100 | Plus |
3R | 31820162 | 3R | 7754655..7755130 | 1..476 | 2380 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tc1 | 1666 | Tc1 TC1 1666bp | 65..191 | 2221..2333 | 125 | 65.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 3839868..3840343 | 1..476 | 100 | -> | Plus |
chr3R | 3840455..3841010 | 477..1032 | 100 | -> | Plus |
chr3R | 3841071..3842654 | 1033..2616 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbp95-RA | 1..2166 | 15..2180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbp95-RA | 1..2166 | 15..2180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbp95-RA | 1..2166 | 15..2180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbp95-RA | 1..2166 | 15..2180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbp95-RA | 1..2166 | 15..2180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbp95-RA | 1..2614 | 1..2614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbp95-RA | 1..2616 | 1..2616 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbp95-RA | 34..2649 | 1..2616 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbp95-RA | 1..2614 | 1..2614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pbp95-RA | 34..2649 | 1..2616 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8013824..8014299 | 1..476 | 100 | -> | Plus |
3R | 8014411..8014966 | 477..1032 | 100 | -> | Plus |
3R | 8015027..8016610 | 1033..2616 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8013824..8014299 | 1..476 | 100 | -> | Plus |
3R | 8014411..8014966 | 477..1032 | 100 | -> | Plus |
3R | 8015027..8016610 | 1033..2616 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8013824..8014299 | 1..476 | 100 | -> | Plus |
3R | 8014411..8014966 | 477..1032 | 100 | -> | Plus |
3R | 8015027..8016610 | 1033..2616 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 3839546..3840021 | 1..476 | 100 | -> | Plus |
arm_3R | 3840133..3840688 | 477..1032 | 100 | -> | Plus |
arm_3R | 3840749..3842332 | 1033..2616 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7754655..7755130 | 1..476 | 100 | -> | Plus |
3R | 7755242..7755797 | 477..1032 | 100 | -> | Plus |
3R | 7755858..7757441 | 1033..2616 | 100 | Plus |
Translation from 14 to 2179
> LD18233.pep MDDADDLRINQQQLMDEISALLQNTAKPSAANALQLNQELQRRLMQVRTK ILAMLQVVRARFSRNEDILVRRLRPRSHFGPNSLNLSGAILRKGTFRFKG NLFFRDIDGRSCPNNEDYEARCHTEMFPTDFDMHSRHVWTLLDKKNVIMG IKQQLLEHRAHSTNALPSGSLKRKPIERHLSTLVSLLATADSSFSIDWNQ ISTLDLEYRHSPYSCEAMWRVYLTPDLRRDDWSPEEDETLLAVATANRMQ NWELIAASLDRRSDYQCFVRFHTALRFLLEPKNSHRWSEEDNDKLRAIVD RNTANSVINWKKVVEYFPDKSKSTLIGRYYYVLHPSISHEPFTTKEDMML FAAVEEYNGKFHCFPRSLFPNRSLTQLRTRYHNVLAQRNKTDSWSVQDDT RLMSFVTQYGASQWLNCATFLGNHTRTSCRTRFLVIKKFLEQNPNAKVED LPRRRSKKVSLVNSDNWAQRLQEWQEDPESLVNDNPPKGTRVRGPKSKKA RIERQAESFSRLSKVDIEFCNFFKFSYNLTLSTPKTFPVPKDVYNLAYVI RALAYKPPIRPSLLQNIFMPNDVLKCYNSMIRNLPDEEGDMKSPLLPPNW STMMGFRALCILSGDCRKDTETRSFEYNESLPPIQLFRKRLQALFYRTTL LSRLESQLFTDLPSALVSLPRPKHDYAKMGTHVELIDPEPAPQNDLKSEP LSENEVINTVKQELEMEYTVP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18154-PA | 712 | GF18154-PA | 1..712 | 1..721 | 2516 | 65 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14352-PA | 722 | GG14352-PA | 1..722 | 1..721 | 3514 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17334-PA | 733 | GH17334-PA | 1..671 | 1..672 | 2034 | 54.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pbp95-PA | 721 | CG2702-PA | 1..721 | 1..721 | 3796 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10259-PA | 760 | GI10259-PA | 1..690 | 1..677 | 2134 | 58.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21479-PA | 515 | GL21479-PA | 1..512 | 1..570 | 1064 | 43.2 | Plus |
Dper\GL21480-PA | 164 | GL21480-PA | 28..159 | 597..713 | 284 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15437-PA | 741 | GA15437-PA | 1..736 | 1..713 | 2092 | 58.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10994-PA | 722 | GM10994-PA | 1..721 | 1..720 | 3629 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19964-PA | 722 | GD19964-PA | 1..721 | 1..720 | 3617 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11065-PA | 749 | GJ11065-PA | 1..687 | 1..677 | 2174 | 59.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13472-PA | 777 | GK13472-PA | 1..692 | 1..672 | 2133 | 59.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24961-PA | 718 | GE24961-PA | 1..718 | 1..721 | 3434 | 88.4 | Plus |
Translation from 14 to 2179
> LD18233.hyp MDDADDLRINQQQLMDEISALLQNTAKPSAANALQLNQELQRRLMQVRTK ILAMLQVVRARFSRNEDILVRRLRPRSHFGPNSLNLSGAILRKGTFRFKG NLFFRDIDGRSCPNNEDYEARCHTEMFPTDFDMHSRHVWTLLDKKNVIMG IKQQLLEHRAHSTNALPSGSLKRKPIERHLSTLVSLLATADSSFSIDWNQ ISTLDLEYRHSPYSCEAMWRVYLTPDLRRDDWSPEEDETLLAVATANRMQ NWELIAASLDRRSDYQCFVRFHTALRFLLEPKNSHRWSEEDNDKLRAIVD RNTANSVINWKKVVEYFPDKSKSTLIGRYYYVLHPSISHEPFTTKEDMML FAAVEEYNGKFHCFPRSLFPNRSLTQLRTRYHNVLAQRNKTDSWSVQDDT RLMSFVTQYGASQWLNCATFLGNHTRTSCRTRFLVIKKFLEQNPNAKVED LPRRRSKKVSLVNSDNWAQRLQEWQEDPESLVNDNPPKGTRVRGPKSKKA RIERQAESFSRLSKVDIEFCNFFKFSYNLTLSTPKTFPVPKDVYNLAYVI RALAYKPPIRPSLLQNIFMPNDVLKCYNSMIRNLPDEEGDMKSPLLPPNW STMMGFRALCILSGDCRKDTETRSFEYNESLPPIQLFRKRLQALFYRTTL LSRLESQLFTDLPSALVSLPRPKHDYAKMGTHVELIDPEPAPQNDLKSEP LSENEVINTVKQELEMEYTVP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pbp95-PA | 721 | CG2702-PA | 1..721 | 1..721 | 3796 | 100 | Plus |