BDGP Sequence Production Resources |
Search the DGRC for LD18367
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 183 |
Well: | 67 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG18542-RA |
Protein status: | LD18367.pep: gold |
Preliminary Size: | 1512 |
Sequenced Size: | 1302 |
Gene | Date | Evidence |
---|---|---|
CG18542 | 2001-01-01 | Release 2 assignment |
CG18542 | 2001-10-10 | Blastp of sequenced clone |
CG18542 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32939 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32939 | 2008-04-29 | Release 5.5 accounting |
CG18542 | 2008-08-15 | Release 5.9 accounting |
CG18542 | 2008-12-18 | 5.12 accounting |
1302 bp (1302 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061243
> LD18367.complete ATTTTGCATCGCTTTGGACACACTGATTGATCGGTGTTTTTATTTTTTTT TGGTTCGGCTTATCTAATAATTTAATAACACATTAATGCAGCCATTTATT GTCATTCGCAACTACACGCAAGATGATGAGCTCAAGTGCCAGGAGCTGGT GCGGGACTACATCATGTCGTTCTCGAATAAGTCCTTTTTTGTCTATTGCT TTCGAGAGATCACCCTGCAGTTCATAGTCATCACGTGGGCCATATTCTTC ATATTTCTGGGAGTGCCCCTGCTTTTTTGTGCACTCACTGTGCCCGCTTG CATATTTTGCCTATTTACCGGCACCTACTTCTCGTTTTACTCCAAGGCAG TGGAGTTGATGAGGACCAAACCATCGCAGTCTTTGGTGGCCGAGTGCTAT GAACCCTTCATTTTCCGCTGCTCACCGAAGGAAGCTAGCTACCAGATATT TACCGAGAACTGTCCATACGAGGAAACATACACGAGGAAATTCCGGCGCA GGATTGTGGCCGCTATTAGTGTGAAGAATCACCACGCCGTATACAATGCT GCATGGATCTATCGCTTTGCCATCGATCCCCATTACCCGTGTCAGACGAT CATGGACCCCATGATAAAACTGGTGGTCAAGAACTGCATTATCGGCGGGT ACGCCTCACTGGAGTGCACTATCTCCGAGTGGCAGGAAAGTGAGCGCGAC TTTTATGATGATTTTGGGTTCGTTACGCGGCAGATCTACCACAAAAAGAT CATTGGCAGCAGTTTGGCAGTGATGAAAACCCAGCTGACCTATGGGTTAC GTACCGACGGAGCAGCTTTGCACAAGCAAAACTAGTGCGTTACCAATGGT GCAATATAGATGATAGATAAATGGATTCTGTGGAATCTTATTTAATATTT ACGTATTTATTCTGTGAACTTTACATTCCAGTCACATATTGCGTCCCGAA CTCAAATCACACCGAATTATGCCCTTGATGGCGTTTCTTTATCGATTCGA CAATGTTTAAAGCCAGTTTAGCCAATATATAGTAAGCTAATACTCCACAA ACATTCCTGCATGTCGACAGACTTTAGCCGTTGTCGGCTCGACAAAGAGT AAATTCCGTCTAGGATTAAGAAGAAACTTTATAATCTCCACACTCGAAGT TTTAATAATTGTAAACACGTTGACACTGCTTTTGTCCTGTTTTATTATCT CTGGTTTATTCTTTGACATATTCTATTTAAATAAATAAATAAAATATTTA GTAATAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18542-RA | 1280 | CG18542-RA | 22..1280 | 1..1259 | 6295 | 100 | Plus |
CG32939-RA | 1264 | CG32939-RA | 6..1264 | 1..1259 | 6295 | 100 | Plus |
unc-115-RD | 2784 | unc-115-RD | 2699..2784 | 1263..1178 | 430 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5512070..5512965 | 364..1259 | 4480 | 100 | Plus |
chr3R | 27901430 | chr3R | 5519390..5520285 | 364..1259 | 4480 | 100 | Plus |
chr3R | 27901430 | chr3R | 5511588..5511795 | 1..208 | 1040 | 100 | Plus |
chr3R | 27901430 | chr3R | 5518908..5519115 | 1..208 | 1040 | 100 | Plus |
chr3R | 27901430 | chr3R | 5511856..5512013 | 207..364 | 790 | 100 | Plus |
chr3R | 27901430 | chr3R | 5519176..5519333 | 207..364 | 790 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 9686246..9687145 | 364..1263 | 4500 | 100 | Plus |
3R | 32079331 | 3R | 9693566..9694465 | 364..1263 | 4500 | 100 | Plus |
3R | 32079331 | 3R | 9685764..9685971 | 1..208 | 1040 | 100 | Plus |
3R | 32079331 | 3R | 9693084..9693291 | 1..208 | 1040 | 100 | Plus |
3R | 32079331 | 3R | 9686032..9686189 | 207..364 | 790 | 100 | Plus |
3R | 32079331 | 3R | 9693352..9693509 | 207..364 | 790 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 9434397..9435296 | 364..1263 | 4500 | 100 | Plus |
3R | 31820162 | 3R | 9427077..9427976 | 364..1263 | 4500 | 100 | Plus |
3R | 31820162 | 3R | 9433915..9434122 | 1..208 | 1040 | 100 | Plus |
3R | 31820162 | 3R | 9426595..9426802 | 1..208 | 1040 | 100 | Plus |
3R | 31820162 | 3R | 9434183..9434340 | 207..364 | 790 | 100 | Plus |
3R | 31820162 | 3R | 9426863..9427020 | 207..364 | 790 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1042..1142 | 1259..1152 | 127 | 63.3 | Minus |
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 6299..6421 | 1234..1111 | 114 | 59.4 | Minus |
G7 | 1192 | G7 G7 1192bp | 1142..1178 | 1222..1258 | 112 | 84.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5511588..5511795 | 1..208 | 100 | -> | Plus |
chr3R | 5511858..5512013 | 209..364 | 100 | -> | Plus |
chr3R | 5512071..5512923 | 365..1217 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32939-RA | 1..750 | 86..835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32939-RA | 1..750 | 86..835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18542-RA | 1..750 | 86..835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32939-RA | 1..750 | 86..835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18542-RA | 1..750 | 86..835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18542-RA | 3..1261 | 1..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32939-RA | 6..1264 | 1..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18542-RA | 5..1263 | 1..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18542-RA | 3..1261 | 1..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18542-RA | 5..1263 | 1..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9685764..9685971 | 1..208 | 100 | -> | Plus |
3R | 9686034..9686189 | 209..364 | 100 | -> | Plus |
3R | 9686247..9687141 | 365..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9685764..9685971 | 1..208 | 100 | -> | Plus |
3R | 9686034..9686189 | 209..364 | 100 | -> | Plus |
3R | 9686247..9687141 | 365..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9685764..9685971 | 1..208 | 100 | -> | Plus |
3R | 9686034..9686189 | 209..364 | 100 | -> | Plus |
3R | 9686247..9687141 | 365..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5511486..5511693 | 1..208 | 100 | -> | Plus |
arm_3R | 5511756..5511911 | 209..364 | 100 | -> | Plus |
arm_3R | 5511969..5512863 | 365..1259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9426595..9426802 | 1..208 | 100 | -> | Plus |
3R | 9426865..9427020 | 209..364 | 100 | -> | Plus |
3R | 9427078..9427972 | 365..1259 | 100 | Plus |
Translation from 85 to 834
> LD18367.hyp MQPFIVIRNYTQDDELKCQELVRDYIMSFSNKSFFVYCFREITLQFIVIT WAIFFIFLGVPLLFCALTVPACIFCLFTGTYFSFYSKAVELMRTKPSQSL VAECYEPFIFRCSPKEASYQIFTENCPYEETYTRKFRRRIVAAISVKNHH AVYNAAWIYRFAIDPHYPCQTIMDPMIKLVVKNCIIGGYASLECTISEWQ ESERDFYDDFGFVTRQIYHKKIIGSSLAVMKTQLTYGLRTDGAALHKQN*
Translation from 85 to 834
> LD18367.pep MQPFIVIRNYTQDDELKCQELVRDYIMSFSNKSFFVYCFREITLQFIVIT WAIFFIFLGVPLLFCALTVPACIFCLFTGTYFSFYSKAVELMRTKPSQSL VAECYEPFIFRCSPKEASYQIFTENCPYEETYTRKFRRRIVAAISVKNHH AVYNAAWIYRFAIDPHYPCQTIMDPMIKLVVKNCIIGGYASLECTISEWQ ESERDFYDDFGFVTRQIYHKKIIGSSLAVMKTQLTYGLRTDGAALHKQN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11670-PA | 248 | GF11670-PA | 1..248 | 1..249 | 1172 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17037-PA | 248 | GG17037-PA | 1..248 | 1..249 | 1295 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18981-PA | 248 | GH18981-PA | 1..248 | 1..249 | 1091 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32939-PA | 249 | CG32939-PA | 1..249 | 1..249 | 1335 | 100 | Plus |
CG18542-PA | 249 | CG18542-PA | 1..249 | 1..249 | 1335 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10841-PA | 248 | GI10841-PA | 1..248 | 1..249 | 1111 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27167-PA | 248 | GL27167-PA | 1..248 | 1..249 | 1075 | 80.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17205-PA | 248 | GA17205-PA | 1..248 | 1..249 | 1074 | 80.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23828-PA | 249 | GM23828-PA | 1..249 | 1..249 | 1313 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18639-PA | 233 | GD18639-PA | 1..227 | 1..227 | 1198 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14447-PA | 248 | GJ14447-PA | 1..248 | 1..249 | 1039 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12187-PA | 248 | GK12187-PA | 1..248 | 1..249 | 1103 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25975-PA | 248 | GE25975-PA | 1..248 | 1..249 | 1300 | 97.6 | Plus |