BDGP Sequence Production Resources |
Search the DGRC for LD18389
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 183 |
Well: | 89 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG6171-RA |
Protein status: | LD18389.pep: gold |
Preliminary Size: | 1135 |
Sequenced Size: | 967 |
Gene | Date | Evidence |
---|---|---|
CG6171 | 2003-02-27 | Blastp of sequenced clone |
CG6171 | 2008-04-29 | Release 5.5 accounting |
CG6171 | 2008-08-15 | Release 5.9 accounting |
CG6171 | 2008-12-18 | 5.12 accounting |
967 bp (967 high quality bases) assembled on 2003-02-27
GenBank Submission: BT004895
> LD18389.complete TAAAAATGTTTTGAAAATTTAACTTAATTTACTTAAAATGAGTGCCACAG ATGCATCTACAGCCGATAGTGGCGCTAAACGAAAATCTTCTGAAGATATC ACACACAATTGCAACGCAAATTTTGGCGCAGAAAACGGCCTAAGAAAGCG CGTAAAATCGGAGGAGCCTGTGGCGTCCATTAAAGATGAAACAAATCCTG AAGTTCCTATGAAAATAAAAGCTGAGCCAGTGGAGAATGCAGATGAGCCC ACAAGCACTACTCCTGCGATCAAGATTAAAGCCGAACCAGCGGACAATGG AAACTCACCTGCAGCTGCGATGGTAAAAACCGAGCCCACTAATAGCAATG CACAGGACGCCGCCGACGAGTCTACCGTATCTTCAAGCAGTATTAGGACT TCTTGTCGCTTCGGCATACGATGCTACAGGCGAAATCCAGCTCATCGTAG TGCAGAAGCTCATCCGGGGGATCAGGATTACCGGCGACCAAACTTTCCAG CGCCACCCCTCGGAACTCCAGCTTGTCCTTTCGGTAACGCATGCTATCGC CGTAACCCAGTTCACTTCCAGGATTACTCCCATCCTGCGGATTGTAAGTA GAAGGCTTGGCATACTTCGGCTTCAAATTGGCTAAAGCCCATTGTAGTCA ATTCCGCGCAGAACATTCGAAATCGTCTGCGTCAACGGCGAGCCCAACGG CAGAACGACGATGACTCGGGGACGGATGAGGAGGATGAACCCTTTGGTGG CGACAATGACAGGGATGCGGACTACCGTCCAGGCGCAGACATAAACGAAG ATGAGGATGATGAGCTGGAGTTTGATAGCCAACCAATAAGTGGGGATGAC TATGATTAGACTATAAATTCAAATTCGCTGTTAACTTAGATGATACGTTC CATTTGCCGAATAATAGGCTTTATATATATATATTATATTCTGTTGATGA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6171-RA | 1079 | CG6171-RA | 127..1079 | 1..953 | 4765 | 100 | Plus |
CG6171-RB | 1025 | CG6171-RB | 127..719 | 1..593 | 2965 | 100 | Plus |
CG34404.c | 3143 | CG34404.c | 2683..3112 | 1..430 | 2150 | 100 | Plus |
CG6171-RB | 1025 | CG6171-RB | 720..1025 | 648..953 | 1530 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11187431..11187950 | 430..949 | 100 | <- | Minus |
chr3R | 11188012..11188440 | 1..429 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6171-RA | 1..564 | 38..601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6171-RA | 1..564 | 38..601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6171-RA | 1..564 | 38..601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6171-RA | 1..564 | 38..601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6171-RA | 1..564 | 38..601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6171-RA | 127..1075 | 1..949 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6171-RA | 127..1075 | 1..949 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6171-RA | 53..1001 | 1..949 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6171-RA | 127..1075 | 1..949 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6171-RA | 53..1001 | 1..949 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15362796..15363315 | 430..949 | 100 | <- | Minus |
3R | 15363377..15363805 | 1..429 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15362796..15363315 | 430..949 | 100 | <- | Minus |
3R | 15363377..15363805 | 1..429 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15362796..15363315 | 430..949 | 100 | <- | Minus |
3R | 15363377..15363805 | 1..429 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11188518..11189037 | 430..949 | 100 | <- | Minus |
arm_3R | 11189099..11189527 | 1..429 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15103627..15104146 | 430..949 | 100 | <- | Minus |
3R | 15104208..15104636 | 1..429 | 100 | Minus |
Translation from 37 to 600
> LD18389.hyp MSATDASTADSGAKRKSSEDITHNCNANFGAENGLRKRVKSEEPVASIKD ETNPEVPMKIKAEPVENADEPTSTTPAIKIKAEPADNGNSPAAAMVKTEP TNSNAQDAADESTVSSSSIRTSCRFGIRCYRRNPAHRSAEAHPGDQDYRR PNFPAPPLGTPACPFGNACYRRNPVHFQDYSHPADCK*
Translation from 37 to 600
> LD18389.pep MSATDASTADSGAKRKSSEDITHNCNANFGAENGLRKRVKSEEPVASIKD ETNPEVPMKIKAEPVENADEPTSTTPAIKIKAEPADNGNSPAAAMVKTEP TNSNAQDAADESTVSSSSIRTSCRFGIRCYRRNPAHRSAEAHPGDQDYRR PNFPAPPLGTPACPFGNACYRRNPVHFQDYSHPADCK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16707-PA | 296 | GF16707-PA | 7..220 | 2..185 | 410 | 46.8 | Plus |
Dana\GF24665-PA | 176 | GF24665-PA | 36..100 | 119..185 | 296 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20607-PA | 207 | GG20607-PA | 15..207 | 2..187 | 712 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19483-PA | 306 | GH19483-PA | 98..228 | 56..185 | 402 | 58.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6171-PA | 187 | CG6171-PA | 1..187 | 1..187 | 1000 | 100 | Plus |
CG6171-PB | 255 | CG6171-PB | 1..185 | 1..185 | 986 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22254-PA | 324 | GI22254-PA | 153..247 | 90..185 | 409 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13753-PA | 303 | GL13753-PA | 98..224 | 58..183 | 429 | 64.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19407-PB | 234 | GA19407-PB | 98..228 | 58..187 | 454 | 65.6 | Plus |
Dpse\GA19407-PA | 303 | GA19407-PA | 98..224 | 58..183 | 440 | 66.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25777-PA | 204 | GM25777-PA | 15..204 | 2..187 | 792 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20355-PA | 204 | GD20355-PA | 21..204 | 8..187 | 754 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24045-PA | 305 | GJ24045-PA | 63..226 | 38..185 | 417 | 54.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11307-PA | 300 | GK11307-PA | 26..207 | 10..186 | 422 | 53.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26382-PA | 275 | GE26382-PA | 16..205 | 3..185 | 659 | 73.7 | Plus |