BDGP Sequence Production Resources |
Search the DGRC for LD18443
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 184 |
Well: | 43 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG13933-RA |
Protein status: | LD18443.pep: gold |
Preliminary Size: | 3206 |
Sequenced Size: | 3156 |
Gene | Date | Evidence |
---|---|---|
CG13933 | 2001-01-01 | Release 2 assignment |
CG13933 | 2002-06-30 | Blastp of sequenced clone |
CG13933 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13933 | 2008-04-29 | Release 5.5 accounting |
CG13933 | 2008-08-15 | Release 5.9 accounting |
CG13933 | 2008-12-18 | 5.12 accounting |
3156 bp (3156 high quality bases) assembled on 2002-06-30
GenBank Submission: AY129444
> LD18443.complete TGAAACCCTATACTATAATATACTTTATTTAATCCCAAAGTTTTTTTTTG ATTGTGGTAAATTTGAAATGCCCGGATGCGCTGAATCTAGCCTGAAAACG CGCCACAGGGATGTGGGATTCTGTGACTGAAGCCATCGGAGCAGCCTTTC TCCTTCCAGCCGTCGTTCAGTGCTGATCTGGGCGGTTCTTCAGGGCTCGT ATTGATTTTTACGGTTTCGGAAGTGATACGCACTTCGCCGTCTAGCGATC TTCCCCGGAAACTGCGTCGCAGGAGATACTAGCATGACTGTGCAGTGTTA GACGGCCGTAAAGGGAGAAGCCAGAGCAATGGGCGGCTCCGTGAGCCAGG TGTTCCGATCCGGATCCGCACTCCTCTCGCATCGCGACGGAAAGCTGTCC AAGGCCACCGAAGAGACCATACAGACACTGTTTGACATCCTGCGCGCCAA TCCGAAGGTTTCCCTGCAGACCCTCGAGAGCCTGCTCATCCAGATCCCAA AGAACGAGAATATCCTGGCCATGCATGACGACTATGGATACAACATCCTG CAGCGCAGCGTCGGCCTCAACCACATCGATCTCACTAAGTGGCTGCTGCA TCGCCACCGCCCGGACGTTAACCGCTCGCCCTGCTCCCTGCCCCTGCACA TCGCCACCCTGCGTGGCTACGAGGAGTGCGTGGAGTTATTGCTTCGGCAT GGCGCACGTATCGACGTGGACACTCGGATGTGTTTTCCTGGCGCCCACAC GAGAAATTGCGAGGAGAGCGGCAAATGGCACAACAACGTGGACGATGTCA GCGAGCGGCTAAACACAAAGCTACAGAACGCGCTCTTCTATGCAATCGAC GGAGATCAGTACAATGTTCTAAGCTTGCTCACCCAAAAAATGGAGGAGCC GTGGATCCCCTTCCGCGTGAAAAAGCCCCTGCTCCACTTGGCCTGCGAAC GCGGCGCCTGGAATTGCGTCCAGCAACTAGTGGTCACCCGTTCGGAGGAA ATCAATCTTATTATGGACGAGTATTACCCGATTCACCATGCCGTGCTTCA TGATGGTCGCTTTCTTGAGCTACTCATTCATCAGGGTGCAATTACAACTG TACGCACCTGCACCCAACAAATGACCCTACTGCATGTGGTTATTTTTGCT GCTCGTAAGTCTGCTGAAGACACGTTGGCCACTCTTCGCATCCTGCTGGA ACGAGGATGCAAAGAGCTAATCAACGCACCAGACTCGTTGGGAAACACTC CACTGCACGCCCTGATAGTGCGCTATGCCCTTGAGGAAGCCCGGTACGGC TACGACAAGTGGAGCAAGTGGGATGTGTTGCACCTAGTGCGATTTCTCCT GCAGAACGGGGCCAAGCAATCGATTAACCAAGCGGGGAACAGTGCCATGG CCTGTGTGTTTCGACACCTGCGAGACTGGGAAGTCTGCTACGAACTGCTA AGCATGCTTATCAAGGAGAATGGAGACCCCAACATCGTGGGGAGAGATGG ATCTGTGCCCATTATGGTTCTGCTAGTGCCATTAATTAATAAGGATCACC TGCATCATTTCACGCACTCCATGAAGGTCTGCTATCTGAACTGCATCCGC ATGCTGCTGCAGCACGGAGCGAATCCCAATTGCTCCTACCGCGCCAACCT TAAACCACTGCACGTGCTCGTGTTTACGGTTAGCGAAAACTTTACGCTTA ATTGTGATGCTCAAAAGCGCACCAACTTCGACTTCATCAAGAACATCCTA CTGATGCTACTTCAGCACGGCCTGGACTGCAATAAGACATATCAGCACAT TCTGCAGGCGGTGATGGACATGGTGCATAATGTGCGCACCTGCCACGACA TGGAGTGCGTCTACGAGTTGACTCTGACGCTAATCCAGTACGGGGCTGAC CCCAACATAGTGCTCAGCGGAAAGACAACGCCCGGCACCGCCATCTTCTC CAACGAGCTGGCAACTTTTCGCAGTTCGTTTCGCACCAACTCGTGCTACC TGCTTTTCTACTACATCATCCTGATCACGAAGAAGGAGTTCATCTTGAAC GATCCGAACGCGACGTATACACGCGTCATTCACCTCTTCTACCTGACTAT GCACCACGAGCCGCTCTTTAATTGCCTCAAGTCCCTACACAACTTTTACG TGGCACAGGTGCCCAGTAAGAAGACGGAGCAGCTAATAGCCCTGATCTCG TCCCTCTACCGTCGGCCGCGCAGTCTAAAGCAGCTATCCCGCTGGGCCAT CTATGAGGCGATGAACCGCAAGCTGGCCCAAAACATCAACTGCCTGAACC TGCCGGGCCCGCTCAAAGACTACGTGCTGCAGTTCGAGAGGTAGCGAGTG GAGCGGCCGAAGGACCAATGAATCCCAACCGCAGCGAACTAGAGTCAATC ACTACTGTTGCCCCTAGGCTATGTAATGTTTAATACGCATATTCGCCTAC CCCAGTAGGTATGTAGGTACGCAATAATTACGAACTATCAGGCCTGTTCT GGGCCGGCCCATCGTAGCTTAACGATCAGTTCTGAAATGACTGAATTTAC TTTGATATCGAAAGCGAATAGTTATGTATACTTTTTGTTATAACACCTAA TTAGATCGCTAAATTCTCTTAATTTAGGGCCAAAGGAGATACGCTTGATC TGAAGCTGTTGCGTATGAGATATGAAAACGTTTTTAAAGTACCTAGACAC AACATGAAACACACACAAGAAGCCAATTTAAATAATGTCAAATCAAACAC GTGCAATTTCTTTGATACGAATATATTGAAACTATTGTGGGAGAGACACG CTCATCTATGTTTTGTAATTCTATACGTACAACTTTGTGAACTGTAATGC GCTTTACACTATACAAGCACATCCCGCCCCCGCACCCAACGGCCCCTCAC CCCGTTTCCAGTCCCTCATGCTGCGTAAGTTATAGTAGGACATAAACTTA AGGCTGTTTTTTGACAAACATTTCGGGTGTTTTAGAATTTTGTATATTCG AACGGAGGAGCGAGGCGTTATGTAATTATTATTGTAACTATTATTATTGT TGCTAAACTGTTGTTAATCTCTGTATCTATAATGTCATTTTCAATCGAAT TGATAACGCTATCGATCAATAAATAAACATAAACTTTAAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13933-RA | 3183 | CG13933-RA | 37..3175 | 1..3139 | 15680 | 99.9 | Plus |
CG13933.a | 3158 | CG13933.a | 25..3158 | 1..3137 | 15600 | 99.8 | Plus |
CG13933.d | 3100 | CG13933.d | 25..2948 | 1..2924 | 14605 | 99.9 | Plus |
CG13933.d | 3100 | CG13933.d | 2949..3100 | 2986..3137 | 760 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1771369..1772931 | 3137..1575 | 7815 | 100 | Minus |
chr3L | 24539361 | chr3L | 1773541..1774679 | 1139..1 | 5680 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 1773137..1773471 | 1473..1139 | 1675 | 100 | Minus |
chr3L | 24539361 | chr3L | 1772978..1773087 | 1581..1472 | 550 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 1771807..1773371 | 3139..1575 | 7825 | 100 | Minus |
3L | 28110227 | 3L | 1773981..1775119 | 1139..1 | 5680 | 99.9 | Minus |
3L | 28110227 | 3L | 1773577..1773911 | 1473..1139 | 1675 | 100 | Minus |
3L | 28110227 | 3L | 1773418..1773527 | 1581..1472 | 550 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 1771807..1773371 | 3139..1575 | 7825 | 100 | Minus |
3L | 28103327 | 3L | 1773981..1775119 | 1139..1 | 5680 | 99.9 | Minus |
3L | 28103327 | 3L | 1773577..1773911 | 1473..1139 | 1675 | 100 | Minus |
3L | 28103327 | 3L | 1773418..1773527 | 1581..1472 | 550 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 4..67 | 3083..3021 | 137 | 70.3 | Minus |
accord2 | 7650 | accord2 QBERT 7650bp | 4353..4390 | 3038..3076 | 129 | 84.6 | Plus |
Tabor | 7345 | Tabor TABOR 7345bp | 1569..1636 | 2998..2930 | 126 | 66.7 | Minus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 7011..7100 | 3112..3023 | 125 | 62.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1771369..1772929 | 1577..3137 | 100 | <- | Minus |
chr3L | 1772983..1773086 | 1473..1576 | 100 | <- | Minus |
chr3L | 1773138..1773470 | 1140..1472 | 100 | <- | Minus |
chr3L | 1773541..1774679 | 1..1139 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13933-RA | 1..2016 | 329..2344 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13933-RA | 1..2016 | 329..2344 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13933-RA | 1..2016 | 329..2344 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13933-RA | 1..2016 | 329..2344 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13933-RA | 1..2016 | 329..2344 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13933-RA | 25..3161 | 1..3137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13933-RA | 25..3161 | 1..3137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13933-RA | 29..3165 | 1..3137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13933-RA | 25..3161 | 1..3137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13933-RA | 29..3165 | 1..3137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1771809..1773369 | 1577..3137 | 100 | <- | Minus |
3L | 1773423..1773526 | 1473..1576 | 100 | <- | Minus |
3L | 1773578..1773910 | 1140..1472 | 100 | <- | Minus |
3L | 1773981..1775119 | 1..1139 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1771809..1773369 | 1577..3137 | 100 | <- | Minus |
3L | 1773423..1773526 | 1473..1576 | 100 | <- | Minus |
3L | 1773578..1773910 | 1140..1472 | 100 | <- | Minus |
3L | 1773981..1775119 | 1..1139 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1771809..1773369 | 1577..3137 | 100 | <- | Minus |
3L | 1773423..1773526 | 1473..1576 | 100 | <- | Minus |
3L | 1773578..1773910 | 1140..1472 | 100 | <- | Minus |
3L | 1773981..1775119 | 1..1139 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1771809..1773369 | 1577..3137 | 100 | <- | Minus |
arm_3L | 1773423..1773526 | 1473..1576 | 100 | <- | Minus |
arm_3L | 1773578..1773910 | 1140..1472 | 100 | <- | Minus |
arm_3L | 1773981..1775119 | 1..1139 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1773578..1773910 | 1140..1472 | 100 | <- | Minus |
3L | 1771809..1773369 | 1577..3137 | 100 | <- | Minus |
3L | 1773423..1773526 | 1473..1576 | 100 | <- | Minus |
3L | 1773981..1775119 | 1..1139 | 99 | Minus |
Translation from 328 to 2343
> LD18443.pep MGGSVSQVFRSGSALLSHRDGKLSKATEETIQTLFDILRANPKVSLQTLE SLLIQIPKNENILAMHDDYGYNILQRSVGLNHIDLTKWLLHRHRPDVNRS PCSLPLHIATLRGYEECVELLLRHGARIDVDTRMCFPGAHTRNCEESGKW HNNVDDVSERLNTKLQNALFYAIDGDQYNVLSLLTQKMEEPWIPFRVKKP LLHLACERGAWNCVQQLVVTRSEEINLIMDEYYPIHHAVLHDGRFLELLI HQGAITTVRTCTQQMTLLHVVIFAARKSAEDTLATLRILLERGCKELINA PDSLGNTPLHALIVRYALEEARYGYDKWSKWDVLHLVRFLLQNGAKQSIN QAGNSAMACVFRHLRDWEVCYELLSMLIKENGDPNIVGRDGSVPIMVLLV PLINKDHLHHFTHSMKVCYLNCIRMLLQHGANPNCSYRANLKPLHVLVFT VSENFTLNCDAQKRTNFDFIKNILLMLLQHGLDCNKTYQHILQAVMDMVH NVRTCHDMECVYELTLTLIQYGADPNIVLSGKTTPGTAIFSNELATFRSS FRTNSCYLLFYYIILITKKEFILNDPNATYTRVIHLFYLTMHHEPLFNCL KSLHNFYVAQVPSKKTEQLIALISSLYRRPRSLKQLSRWAIYEAMNRKLA QNINCLNLPGPLKDYVLQFER*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24964-PA | 671 | GF24964-PA | 1..671 | 1..671 | 3451 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14563-PA | 671 | GG14563-PA | 1..671 | 1..671 | 3595 | 99.4 | Plus |
Dere\GG16463-PA | 1551 | GG16463-PA | 377..686 | 81..482 | 156 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15721-PA | 675 | GH15721-PA | 1..675 | 1..671 | 3249 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13933-PA | 671 | CG13933-PA | 1..671 | 1..671 | 3552 | 100 | Plus |
CG13933-PB | 670 | CG13933-PB | 1..670 | 1..671 | 3534 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12775-PA | 712 | GI12775-PA | 1..712 | 1..671 | 3289 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16213-PA | 1696 | GL16213-PA | 1..528 | 1..527 | 2726 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12637-PA | 691 | GA12637-PA | 1..691 | 1..671 | 3339 | 91 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14171-PA | 671 | GM14171-PA | 1..671 | 1..671 | 3609 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13440-PA | 671 | GD13440-PA | 1..671 | 1..671 | 3599 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16073-PA | 696 | GJ16073-PA | 1..695 | 1..670 | 3305 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17558-PA | 720 | GK17558-PA | 1..720 | 1..671 | 3280 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20917-PA | 671 | GE20917-PA | 1..671 | 1..671 | 3608 | 99.9 | Plus |
Translation from 328 to 2343
> LD18443.hyp MGGSVSQVFRSGSALLSHRDGKLSKATEETIQTLFDILRANPKVSLQTLE SLLIQIPKNENILAMHDDYGYNILQRSVGLNHIDLTKWLLHRHRPDVNRS PCSLPLHIATLRGYEECVELLLRHGARIDVDTRMCFPGAHTRNCEESGKW HNNVDDVSERLNTKLQNALFYAIDGDQYNVLSLLTQKMEEPWIPFRVKKP LLHLACERGAWNCVQQLVVTRSEEINLIMDEYYPIHHAVLHDGRFLELLI HQGAITTVRTCTQQMTLLHVVIFAARKSAEDTLATLRILLERGCKELINA PDSLGNTPLHALIVRYALEEARYGYDKWSKWDVLHLVRFLLQNGAKQSIN QAGNSAMACVFRHLRDWEVCYELLSMLIKENGDPNIVGRDGSVPIMVLLV PLINKDHLHHFTHSMKVCYLNCIRMLLQHGANPNCSYRANLKPLHVLVFT VSENFTLNCDAQKRTNFDFIKNILLMLLQHGLDCNKTYQHILQAVMDMVH NVRTCHDMECVYELTLTLIQYGADPNIVLSGKTTPGTAIFSNELATFRSS FRTNSCYLLFYYIILITKKEFILNDPNATYTRVIHLFYLTMHHEPLFNCL KSLHNFYVAQVPSKKTEQLIALISSLYRRPRSLKQLSRWAIYEAMNRKLA QNINCLNLPGPLKDYVLQFER*