BDGP Sequence Production Resources |
Search the DGRC for LD18607
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 186 |
Well: | 7 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG8460-RA |
Protein status: | LD18607.pep: gold |
Preliminary Size: | 1472 |
Sequenced Size: | 1325 |
Gene | Date | Evidence |
---|---|---|
CG8460 | 2001-01-01 | Release 2 assignment |
CG8460 | 2001-10-10 | Blastp of sequenced clone |
CG8460 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8460 | 2008-04-29 | Release 5.5 accounting |
CG8460 | 2008-08-15 | Release 5.9 accounting |
CG8460 | 2008-12-18 | 5.12 accounting |
1325 bp (1325 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061246
> LD18607.complete TGCGATTTATGCTGTGGTCCTGATTGTCCTTCTGTCGAAATGCGTGCGCC TGATGCGCTCCTGCTCCGCGTCGCTCTCCTGCTTCTACTGCTGACCACCG TCCGCGGAACCCTCGCCCCGGACAGCCACAAATCGAAGAGCAAGACCAAG GAGAGTGCTCTGCGTGGCGGTCCGCAAGACCAAGATGTTTTCGATCTGGG CTTGGTTAGTCCCGAGCCCCTGGCCAAGGATATCGTGAGCAATCATCGCG GGTACTTCAAGGAGACGGGATTGCGACGCTTCAATGGCACCACCTTGGGC TATGTGACTCCATGGAACTCGCATGGCTATGATGTGGCTAAGATATTTGC CAAGAAGTTCGACATTATCTCGCCGGTTTGGCTGCAGATTGTTAAGCAGG GAGATCGTTATGCCGTAGCCGGAACCCATGACATCGATGCGGGTTGGCTA ACCGATGTCCGGAGAAAGGGTAAACAGGTGCACAATCAGCGAACGGTTAA AGTGTTTCCCCGTTTTATATTCGATCACTTCACTGATCGGGACATTAAGC TCTTGCTTAGCGACGCCCAGGAGAGGACGAAAGTCAACGACGTGCTGATC AAGTGCTGCAAGGATAATGGCTTCGATGGACTCGTCCTGGAGGTGTGGTC CCAGCTAGCTGGACGCATAGATGACAAAATTCTGTACACACTGGTTTTGC AAATGGCCAAAGAACTACAAAAGCAACAGCTGCGACTCATTTTGGTCATT CCTCCATTCCGCAAGGAAACAGGCCACCTTTTTGGAGAAAAGCACATGGA CAAGCTGTTCAAGCACATATACGCCTTCTCTCTGATGACTTACGACTTCT CCAGCGTGCAGCGTCCCGGAGCAAATGCACCATTATATTTCGTCCGTAAG GCTGTGGAGACAATAGCTCCAGAAGGTTGCGCTGATATGACGGCTAAGAG GGCTAAAATTCTGTTGGGACTGAATATGTACGGGAATGATTACACGCCCG ATGGAGGTGGACCCATCACCTTCTCCCAGTACTTGGATCTAGTCAGGCAT GTGAAGAAGCACCTAACTTACGATGAGCGGGATGTGGAAAATTTCTTTGA AATCAAAAACGATGACGGTCGCCACATTGTCTTTTATCCCACTCTCTATT CCATAAACGAGCGAATAAAGCTCGCCCAGGAACTGGGCACTGGCATTTCA ATCTGGGAACTTGGCCAAGGCCTAAACTATTTTTACGATCTCTTCTAGTT AGCCTGTAAGCAGCATGCAATGCACAATACCTATTCCAAATAAAGGAAAT TATATATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8460-RA | 1463 | CG8460-RA | 132..1440 | 1..1309 | 6545 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 8197144..8197544 | 706..1106 | 2005 | 100 | Plus |
chr2L | 23010047 | chr2L | 8196250..8196561 | 1..312 | 1545 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 8196873..8197078 | 501..706 | 1030 | 100 | Plus |
chr2L | 23010047 | chr2L | 8197605..8197809 | 1103..1307 | 995 | 99 | Plus |
chr2L | 23010047 | chr2L | 8196628..8196817 | 313..502 | 920 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8198148..8198548 | 706..1106 | 2005 | 100 | Plus |
2L | 23513712 | 2L | 8197254..8197565 | 1..312 | 1560 | 100 | Plus |
2L | 23513712 | 2L | 8197877..8198082 | 501..706 | 1030 | 100 | Plus |
2L | 23513712 | 2L | 8198609..8198815 | 1103..1309 | 1020 | 99.5 | Plus |
2L | 23513712 | 2L | 8197632..8197821 | 313..502 | 950 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8198148..8198548 | 706..1106 | 2005 | 100 | Plus |
2L | 23513712 | 2L | 8197254..8197565 | 1..312 | 1560 | 100 | Plus |
2L | 23513712 | 2L | 8197877..8198082 | 501..706 | 1030 | 100 | Plus |
2L | 23513712 | 2L | 8198609..8198815 | 1103..1309 | 1020 | 99.5 | Plus |
2L | 23513712 | 2L | 8197632..8197821 | 313..502 | 950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8196250..8196561 | 1..312 | 99 | -> | Plus |
chr2L | 8196628..8196817 | 313..502 | 98 | -> | Plus |
chr2L | 8196875..8197078 | 503..706 | 100 | -> | Plus |
chr2L | 8197145..8197544 | 707..1106 | 100 | -> | Plus |
chr2L | 8197609..8197809 | 1107..1307 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8460-RA | 1..1209 | 40..1248 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8460-RA | 1..1209 | 40..1248 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8460-RA | 1..1209 | 40..1248 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8460-RA | 1..1209 | 40..1248 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8460-RA | 1..1209 | 40..1248 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8460-RA | 59..1365 | 1..1307 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8460-RA | 59..1365 | 1..1307 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8460-RA | 62..1368 | 1..1307 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8460-RA | 59..1365 | 1..1307 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8460-RA | 62..1368 | 1..1307 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8197879..8198082 | 503..706 | 100 | -> | Plus |
2L | 8197632..8197821 | 313..502 | 100 | -> | Plus |
2L | 8197254..8197565 | 1..312 | 100 | -> | Plus |
2L | 8198149..8198548 | 707..1106 | 100 | -> | Plus |
2L | 8198613..8198813 | 1107..1307 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8197879..8198082 | 503..706 | 100 | -> | Plus |
2L | 8197632..8197821 | 313..502 | 100 | -> | Plus |
2L | 8197254..8197565 | 1..312 | 100 | -> | Plus |
2L | 8198149..8198548 | 707..1106 | 100 | -> | Plus |
2L | 8198613..8198813 | 1107..1307 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8197879..8198082 | 503..706 | 100 | -> | Plus |
2L | 8197632..8197821 | 313..502 | 100 | -> | Plus |
2L | 8197254..8197565 | 1..312 | 100 | -> | Plus |
2L | 8198149..8198548 | 707..1106 | 100 | -> | Plus |
2L | 8198613..8198813 | 1107..1307 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8197254..8197565 | 1..312 | 100 | -> | Plus |
arm_2L | 8197632..8197821 | 313..502 | 100 | -> | Plus |
arm_2L | 8197879..8198082 | 503..706 | 100 | -> | Plus |
arm_2L | 8198149..8198548 | 707..1106 | 100 | -> | Plus |
arm_2L | 8198613..8198813 | 1107..1307 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8197254..8197565 | 1..312 | 100 | -> | Plus |
2L | 8197632..8197821 | 313..502 | 100 | -> | Plus |
2L | 8197879..8198082 | 503..706 | 100 | -> | Plus |
2L | 8198149..8198548 | 707..1106 | 100 | -> | Plus |
2L | 8198613..8198813 | 1107..1307 | 100 | Plus |
Translation from 0 to 1247
> LD18607.hyp CDLCCGPDCPSVEMRAPDALLLRVALLLLLLTTVRGTLAPDSHKSKSKTK ESALRGGPQDQDVFDLGLVSPEPLAKDIVSNHRGYFKETGLRRFNGTTLG YVTPWNSHGYDVAKIFAKKFDIISPVWLQIVKQGDRYAVAGTHDIDAGWL TDVRRKGKQVHNQRTVKVFPRFIFDHFTDRDIKLLLSDAQERTKVNDVLI KCCKDNGFDGLVLEVWSQLAGRIDDKILYTLVLQMAKELQKQQLRLILVI PPFRKETGHLFGEKHMDKLFKHIYAFSLMTYDFSSVQRPGANAPLYFVRK AVETIAPEGCADMTAKRAKILLGLNMYGNDYTPDGGGPITFSQYLDLVRH VKKHLTYDERDVENFFEIKNDDGRHIVFYPTLYSINERIKLAQELGTGIS IWELGQGLNYFYDLF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8460-PA | 402 | CG8460-PA | 1..402 | 14..415 | 2112 | 100 | Plus |
Translation from 39 to 1247
> LD18607.pep MRAPDALLLRVALLLLLLTTVRGTLAPDSHKSKSKTKESALRGGPQDQDV FDLGLVSPEPLAKDIVSNHRGYFKETGLRRFNGTTLGYVTPWNSHGYDVA KIFAKKFDIISPVWLQIVKQGDRYAVAGTHDIDAGWLTDVRRKGKQVHNQ RTVKVFPRFIFDHFTDRDIKLLLSDAQERTKVNDVLIKCCKDNGFDGLVL EVWSQLAGRIDDKILYTLVLQMAKELQKQQLRLILVIPPFRKETGHLFGE KHMDKLFKHIYAFSLMTYDFSSVQRPGANAPLYFVRKAVETIAPEGCADM TAKRAKILLGLNMYGNDYTPDGGGPITFSQYLDLVRHVKKHLTYDERDVE NFFEIKNDDGRHIVFYPTLYSINERIKLAQELGTGISIWELGQGLNYFYD LF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14623-PA | 402 | GF14623-PA | 1..402 | 1..402 | 1871 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10520-PA | 402 | GG10520-PA | 1..402 | 1..402 | 2023 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11509-PA | 401 | GH11509-PA | 9..401 | 11..402 | 1538 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8460-PA | 402 | CG8460-PA | 1..402 | 1..402 | 2112 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\moj30-PA | 400 | GI17005-PA | 1..400 | 1..402 | 1634 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18725-PA | 403 | GL18725-PA | 1..403 | 1..402 | 1803 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21094-PB | 403 | GA21094-PB | 1..403 | 1..402 | 1803 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16819-PA | 402 | GM16819-PA | 1..402 | 1..402 | 2112 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23511-PA | 402 | GD23511-PA | 1..402 | 1..402 | 2130 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24303-PA | 402 | GJ24303-PA | 1..402 | 1..402 | 1652 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15155-PA | 399 | GK15155-PA | 3..399 | 6..402 | 1680 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18741-PA | 402 | GE18741-PA | 1..402 | 1..402 | 2093 | 97.3 | Plus |