BDGP Sequence Production Resources |
Search the DGRC for LD18758
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 187 |
Well: | 58 |
Vector: | pBS SK- |
Associated Gene/Transcript | RYBP-RA |
Protein status: | LD18758.pep: gold |
Preliminary Size: | 2183 |
Sequenced Size: | 2074 |
Gene | Date | Evidence |
---|---|---|
CG12190 | 2001-01-01 | Release 2 assignment |
CG12190 | 2001-11-29 | Blastp of sequenced clone |
CG12190 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12190 | 2008-04-29 | Release 5.5 accounting |
CG12190 | 2008-08-15 | Release 5.9 accounting |
CG12190 | 2008-12-18 | 5.12 accounting |
2074 bp (2074 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069460
> LD18758.complete TTGCCGCAGCCAAAAAGACAATTGCAGAAAGTTTTTTTCACAACAAAAAG CCACCGAAAACGCTCCAATTAAGCAACAAATGCGTGCCAAAAGCGCAGCG AATCTCCACTGAGGCCACCGTGTGTGCGTGAGCGTGGCAAAGGTGCGAGC AGAGCAACCAAACATCACAGGAACACGGCCAGCAGCAGCAGCGGATCAGC AGAGGGGCGGGCAGAGGCAGAGGCGGTGGCAGAGGGAAAAGTCGGGCATT TTCATTGGATTCGTTTTGGTCCGATTCGATTGGATTGCGGTTACTCCAGC GGCGCCCAGGCGTTCCTCCTCTCCTCCTGTATTATGGACAAGAAATCCTC GCCGGTGCGACGACAAAAGCGGCAGGCGAAGGTGATCGAGGAGAACTTCT GGGACTGCAGCGTCTGCACATATAGAAACTCGGCGGAGGCCTTCAAGTGT CGCATGTGCGACGTGCGGAAAGGAACCTCCACGCGAAAGCCACGCCTGAA CTCAGCGCTAGTCGCCCAGCAGGCCGCCACTTTGCCAGGAGCCAGTGTCA ACATGCCCAACGGGAAGTCCGCCTCCGGATCACGGCATGGCAGTGGGCAC GACCGGCAGAGGCACAAGCGGTATCCGGCACGGTTGAAAAACGTGGACCG ATCGACGGCACAGACGCGAGAGGTGACGGTCAACTCGGTGACCGTGTTCA TCACAGAGTACAAGGCCAAGCCGGTGAGCAGCCGACGCGAATCCAGTGAG CAGAGCTTCAGCGAGAGCAACGACAGCCGGAGTTAGAGGAGGGATACAAG GCCTCCTCGCCCCCAGCTCCCCAATATTCTACGCCACGGTTCCCGCTCCC CTGTTACAAGTTGTAAATTCTAAGTGTTAGGCCCCTGGCGATAACAATTG TAAATCGAAATCCATTTAAGTTACCAAGTATTAGGCCACGTTTAAAGCCC CGAAAGCCAAGCCCCCACTAGTTCATGACTTCCAGCCCAGGCCAAGATGG CAAAGCAAAGCGAAGCGACGGCGAGTCGATTGCATTTACACGACGCTCTC CAAATCCCATTTTAAAATGCGCTAGACCCTGTAAATAGCGATGCATGAGT TCCCTGAATATCTCTGTCTCGTATCGTAATTTTAGTTGTAATTTAATTCT GCTACTCTAATTCCTAATTTATTGATGCAAAGGTAACTATGTATAACCGC CGTGTACATGTTCAACAAAGATATCATTTGTTTTGTAAGTGTCGAATTAA AATATGGTTTAACTAAGTGCAAGTTAATCTCAATGTTCCACTAGCAGCGC CCATCCCCCATGGTTTGTGTAACTATTATAAACTGCCCTTTTTTTTTTGA CTAGAAAATGCTGCTTGACAACGAAGTGTAGCGAGAAGAGAGCCACGTAG CTTGGTTGTAGACAATTTGCTAATTTTAATTTGTTTGTATACAAGACTGA TTAAGCGTTACCAACCAGATATAGAGAGGTCCGCACACGCACCCAGCCCG AATCCGATTTTCCTTTTGGTTTACACCCGAGATAGCCTCACAGCCAGCAA ACAATAGACGAATACTCGAACTCGCAAAAAGAGAATTTTGTACTTAGCAG AGCTTAAACGCTCTTCCACCATAGCAATAATTACTTAGCAAACAATGAAA AACATGAATTTTGATATGAACGATTGTATTTAATATTGGATAACAGATAT AATGGTTTATAAAGTGCTTGATATTTGTATTTTGAGATAGATTATTTAGC CACACATGAACACTAACACACACCCACTCGAAACTGCCGACTGTAGTCAA GAAACAACTTCCAATAGACAAACTTCAATTTGGATTATCGTAAACATGTA CAATTAATATGAACAGTTTGTATTCCAAATGCTTGGCCAGTTGAGCATTA ATCAACAGCAACGACAAAGACAAAGACAAAACTTAAGCAAACGCAATTAA AGCCGCACTCACACGACAACACGGATAGTTAAAACTTGAATTCCAATTGT AAAGCGTAAACTTTTAAAGCATTATAAAATACATTAAATAAATTTCGAAA ATGCTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RYBP-RA | 2234 | RYBP-RA | 115..2170 | 1..2056 | 10280 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 7139..7238 | 1731..1630 | 117 | 62.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 18557311..18557782 | 1..472 | 100 | -> | Plus |
chr2R | 18558167..18559749 | 473..2055 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12190-RA | 1..453 | 334..786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RYBP-RA | 1..453 | 334..786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RYBP-RA | 1..453 | 334..786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12190-RA | 1..453 | 334..786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RYBP-RA | 1..453 | 334..786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12190-RA | 23..2077 | 1..2055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RYBP-RA | 23..2077 | 1..2055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RYBP-RA | 28..2082 | 1..2055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12190-RA | 23..2077 | 1..2055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RYBP-RA | 10..2064 | 1..2055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22670774..22671245 | 1..472 | 100 | -> | Plus |
2R | 22671630..22673212 | 473..2055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22670774..22671245 | 1..472 | 100 | -> | Plus |
2R | 22671630..22673212 | 473..2055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22670774..22671245 | 1..472 | 100 | -> | Plus |
2R | 22671630..22673212 | 473..2055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 18558279..18558750 | 1..472 | 100 | -> | Plus |
arm_2R | 18559135..18560717 | 473..2055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22671973..22672444 | 1..472 | 100 | -> | Plus |
2R | 22672829..22674411 | 473..2055 | 100 | Plus |
Translation from 333 to 785
> LD18758.hyp MDKKSSPVRRQKRQAKVIEENFWDCSVCTYRNSAEAFKCRMCDVRKGTST RKPRLNSALVAQQAATLPGASVNMPNGKSASGSRHGSGHDRQRHKRYPAR LKNVDRSTAQTREVTVNSVTVFITEYKAKPVSSRRESSEQSFSESNDSRS *
Translation from 333 to 785
> LD18758.pep MDKKSSPVRRQKRQAKVIEENFWDCSVCTYRNSAEAFKCRMCDVRKGTST RKPRLNSALVAQQAATLPGASVNMPNGKSASGSRHGSGHDRQRHKRYPAR LKNVDRSTAQTREVTVNSVTVFITEYKAKPVSSRRESSEQSFSESNDSRS *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11639-PA | 150 | GF11639-PA | 1..150 | 1..150 | 784 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22783-PA | 150 | GG22783-PA | 1..150 | 1..150 | 788 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19772-PA | 151 | GH19772-PA | 1..151 | 1..150 | 756 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RYBP-PB | 150 | CG12190-PB | 1..150 | 1..150 | 771 | 100 | Plus |
RYBP-PA | 150 | CG12190-PA | 1..150 | 1..150 | 771 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20311-PA | 150 | GI20311-PA | 1..150 | 1..150 | 772 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11369-PA | 150 | GL11369-PA | 1..150 | 1..150 | 774 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11466-PA | 150 | GA11466-PA | 1..150 | 1..150 | 774 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15940-PA | 150 | GM15940-PA | 1..150 | 1..150 | 788 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11693-PA | 150 | GD11693-PA | 1..150 | 1..150 | 788 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22038-PA | 150 | GJ22038-PA | 1..150 | 1..150 | 772 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21447-PA | 151 | GK21447-PA | 1..151 | 1..150 | 757 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14012-PA | 150 | GE14012-PA | 1..150 | 1..150 | 788 | 99.3 | Plus |