BDGP Sequence Production Resources |
Search the DGRC for LD18761
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 187 |
Well: | 61 |
Vector: | pBS SK- |
Associated Gene/Transcript | Nup107-RA |
Protein status: | LD18761.pep: gold |
Preliminary Size: | 2682 |
Sequenced Size: | 2699 |
Gene | Date | Evidence |
---|---|---|
CG6743 | 2000-02-14 | Blastp of sequenced clone |
CG6743 | 2001-01-01 | Release 2 assignment |
CG6743 | 2003-01-01 | Sim4 clustering to Release 3 |
Nup107 | 2008-04-29 | Release 5.5 accounting |
Nup107 | 2008-08-15 | Release 5.9 accounting |
Nup107 | 2008-12-18 | 5.12 accounting |
2699 bp (2699 high quality bases) assembled on 2000-02-14
GenBank Submission: AF160938
> LD18761.complete TTTTTAGCGAATAGCGCGTGAATTTCTGTTTTGATTAAATTAATTGAATT GATGTGCCGTAGCTGATAGCCAAGAAACGCATAGTGCAGCCATGGCCGAC AGCCCGTTCCCGAGGAGCAGCCGCAGTGGCCTGCTACGCACGACGCTGAA CAGCTCGATGCCGCCGCAAAATCTCTCCCACTCGCTGCTCATCCTCGAGA AGAGCAACGCGGAGCAGAATGAGCTCTCGCTGATGGAGGACACCGGCGAT GATCTGGATCGGGGCAAGAGCCGCATGGACGTGCTCTTCCCGCAGTTCTT CGACGTGCTGCAGGCTCAGGGTAACGGGCAGGAGGCATTCGAGGTGATCC AATCGCTGACGCAAGTCTGTCGCGGCGTGGTGGAGCAGCTGGAGCTGGAG ATCGATCACGGCATGGGTGGGGAACAGGGCGCGCGGCAACGCGAGTCTAT GCTCACCTGGCTGCGACAGGAGATAAACACGTGGCGCCTGCTGCACGCCC TCTTCTACGACCGCATCCTGCTGCAGACGGACAGGCAGGCGGATGATGAG ATGCAAGATGGCCCCACGCTCGGCGGCAGCGAGAAGGAGGTCATACAGCA GTTGTACGCCCTCAATGCGACGCTGCGTGAGTACCAGCTGGTGGTGGACT GGCTGGAGGCGTGCTACGACCGGGGGGAGCAACAAAACCCACTCCACGCC CACGATCGTATGATGGCGTGGGAGAACACGCTCTTCCAACTGGAGAACCT GCAGGGCGCCGCCTTTGGCAAGGGCCATAAGATCGTAACGCGTCTGGATC CAGATGCTCCCGTACGCGAGAAACGACCGTTGCACGCCCTCGACGAGGAG GACAACCTGCGCCTGTCCCGCGCCATTTTCGAATTGATACGAGCGGGACG CGTCGACGATGGCCTCAAGTTGTGCAAGCACTTCGGACAGACGTGGCGGG CGGCGATCCTTGAGGGCTGGCGTCTCCACGAGGATCCCAACTTCGAGCAG AATGTCTCGGTGCTGCACGAAAAGCTGCCCATCGAGGGCAATCCCAGGAG GGATATCTGGAAGCGCTGCGCGTGGATGCTGGCCGATTCCAAGAACTATG ACGAGTACAGCCGCGCGACGGCGGGTGTCTTCTCCGGCCACTTGGGCTCG CTGAAAACCCTTTTGCACAGCAACTGGCACGATTTGCTCTGGGCCCATCT GAAGGTGCAGATCGACATCCGTGTGGAATCGGAGATACGCGGCTGCTGCC TCAAAAACTACCAACCGATGCCCGATGATTACTGGAACGGCAGGATGACG ATGGAGCAGATCTTCGAGGAACTGAACGTTGCCAAGGATGCGTCGGTGCG GGATTTCGCCCAAAGTCAACTGGGCATTATCCAGCGTCATTTAATCCTGG ATACTTGCGGCGAGCTGATCCAACACATGGTGCGCTGGGTGGAGAAGGAT ACCTCCCAACAATCGCCCCATCAATTGCGCTTTATGGCCCACATAGTGCT CTTCCTGCGTCAAATCGGCCGTGTGGAGCAGGAGCGACAGGCGGAGAAGA TCGTAGCCGCATATGTGGAGGCATTGATTGCCAGGGGCGAACCGCAGCTA ATAGCCTACTATACTGCATCGCTTTCGAATCCGCTGCAGGTTCAGCTCTA CTCGCGGTTTCTGGAGCAAGTGGAGCAGAAGCGTCCGCGGGAGCTAGCTG TGGATGCCGCCCTGCAGGCGGGCTTGGATGTGGAACAGATCACACGCGTC ACCGTGCAGAATATTCGCCTCGCACATCAGCCACTCGGGGAATTCGGTGA GCCGCAGTCCGGCGAGATCTCTGCAATCGATCAGCGCAAGATCTCAGCAT TGGAGTGGCTAATCCATTTGCCGGAGCAGCGCGGTGAGTTGCTGTGGCAG GCCAACGCCATGATACGCACCTATCTGGCCAGCAGCAAGGTGGAGTGCAT GCGCCAGACCTTCCGCATGGTGCCGGCCGACATAGTGCAGCAACTAGTCA GCTTGTACGGCTCGGTGGACAACATACCACCGCGTGAGGAGTGCTGCCTG AAGGAGTATCTCTGCTACAAGGCGTATCTGTCTGGCGTCGACAGTTTCGT CGAATGGAACCGCCTGCAGCAGAACAGGCCCAAGAAGCCACAGACTTCAC ACGCAGCTTCCTCGCAGGACAACTTCACGGAGCGCATGGCGAGTGAGCGC AAGGAGCAGGCTCACCGATCGGAAGTCGTGCGCTGGGAGCACAAGGTTAA GGAGCAGGCCAAGCAAACCATCGAACTCCTGTACAATGTGCTCATGTTCC CGGACAAGGGTTGGCTGGTGGATCCGTTCATCGCCAAGCTGCCCGAGAAC GCCGTGCAGCTGAGCTGGGATCATCGCCTACTGCAGATGGAGAAATTGCG CTCCATCTGCATTCCTGAGATCGCCCTGTTTCTGAACGAAGTGATGTTCA AGTCGGGAGACTTTGCGGGTTGCGTGCGCCTGGCAGATGAAATATCCAGC GAGAATCGGCAGTTGTACAAAGTCTATACGAAGCACAAGCTGGCAGAGCT TCTGGCCAAGATCGCGGACGCCTCCCTGGAGCTGCTCAACTCGAAACTGG ATCCATGGGGCTATCCTATAACAACTTAGCAATCCTAGTACATTTGTGTG TTTTGCGATTACATTCTAACTTTAAACGTTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nup107-RA | 2728 | Nup107-RA | 47..2726 | 1..2680 | 13400 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10732057..10732472 | 2265..2680 | 99 | <- | Minus |
chr2L | 10732537..10734800 | 1..2264 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup107-RA | 1..2538 | 92..2629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup107-RA | 1..2538 | 92..2629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup107-RA | 1..2538 | 92..2629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup107-RA | 1..2538 | 92..2629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup107-RA | 1..2538 | 92..2629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup107-RA | 18..2696 | 1..2679 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup107-RA | 42..2721 | 1..2680 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup107-RA | 36..2715 | 1..2680 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup107-RA | 18..2696 | 1..2679 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nup107-RA | 36..2715 | 1..2680 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10733293..10733708 | 2265..2680 | 100 | <- | Minus |
2L | 10733773..10736036 | 1..2264 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10733293..10733708 | 2265..2680 | 100 | <- | Minus |
2L | 10733773..10736036 | 1..2264 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10733293..10733708 | 2265..2680 | 100 | <- | Minus |
2L | 10733773..10736036 | 1..2264 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10733293..10733708 | 2265..2680 | 100 | <- | Minus |
arm_2L | 10733773..10736036 | 1..2264 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10733293..10733708 | 2265..2680 | 100 | <- | Minus |
2L | 10733773..10736036 | 1..2264 | 100 | Minus |
Translation from 91 to 2628
> LD18761.pep MADSPFPRSSRSGLLRTTLNSSMPPQNLSHSLLILEKSNAEQNELSLMED TGDDLDRGKSRMDVLFPQFFDVLQAQGNGQEAFEVIQSLTQVCRGVVEQL ELEIDHGMGGEQGARQRESMLTWLRQEINTWRLLHALFYDRILLQTDRQA DDEMQDGPTLGGSEKEVIQQLYALNATLREYQLVVDWLEACYDRGEQQNP LHAHDRMMAWENTLFQLENLQGAAFGKGHKIVTRLDPDAPVREKRPLHAL DEEDNLRLSRAIFELIRAGRVDDGLKLCKHFGQTWRAAILEGWRLHEDPN FEQNVSVLHEKLPIEGNPRRDIWKRCAWMLADSKNYDEYSRATAGVFSGH LGSLKTLLHSNWHDLLWAHLKVQIDIRVESEIRGCCLKNYQPMPDDYWNG RMTMEQIFEELNVAKDASVRDFAQSQLGIIQRHLILDTCGELIQHMVRWV EKDTSQQSPHQLRFMAHIVLFLRQIGRVEQERQAEKIVAAYVEALIARGE PQLIAYYTASLSNPLQVQLYSRFLEQVEQKRPRELAVDAALQAGLDVEQI TRVTVQNIRLAHQPLGEFGEPQSGEISAIDQRKISALEWLIHLPEQRGEL LWQANAMIRTYLASSKVECMRQTFRMVPADIVQQLVSLYGSVDNIPPREE CCLKEYLCYKAYLSGVDSFVEWNRLQQNRPKKPQTSHAASSQDNFTERMA SERKEQAHRSEVVRWEHKVKEQAKQTIELLYNVLMFPDKGWLVDPFIAKL PENAVQLSWDHRLLQMEKLRSICIPEIALFLNEVMFKSGDFAGCVRLADE ISSENRQLYKVYTKHKLAELLAKIADASLELLNSKLDPWGYPITT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14071-PA | 847 | GF14071-PA | 1..847 | 1..845 | 3585 | 77.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10363-PA | 845 | GG10363-PA | 1..844 | 1..844 | 4175 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11309-PA | 890 | GH11309-PA | 2..890 | 3..845 | 2963 | 62.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nup107-PA | 845 | CG6743-PA | 1..845 | 1..845 | 4416 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17818-PA | 878 | GI17818-PA | 2..878 | 3..845 | 3101 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26389-PA | 839 | GL26389-PA | 1..839 | 1..845 | 3294 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19826-PA | 839 | GA19826-PA | 1..839 | 1..845 | 3297 | 72.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11485-PA | 845 | GM11485-PA | 1..845 | 1..845 | 4294 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Nup170-PA | 845 | GD22231-PA | 1..845 | 1..845 | 4330 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17646-PA | 879 | GJ17646-PA | 9..879 | 11..845 | 3142 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24746-PA | 853 | GK24746-PA | 5..853 | 11..845 | 2907 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13395-PA | 845 | GE13395-PA | 1..844 | 1..844 | 4176 | 91.6 | Plus |
Translation from 91 to 2628
> LD18761.hyp MADSPFPRSSRSGLLRTTLNSSMPPQNLSHSLLILEKSNAEQNELSLMED TGDDLDRGKSRMDVLFPQFFDVLQAQGNGQEAFEVIQSLTQVCRGVVEQL ELEIDHGMGGEQGARQRESMLTWLRQEINTWRLLHALFYDRILLQTDRQA DDEMQDGPTLGGSEKEVIQQLYALNATLREYQLVVDWLEACYDRGEQQNP LHAHDRMMAWENTLFQLENLQGAAFGKGHKIVTRLDPDAPVREKRPLHAL DEEDNLRLSRAIFELIRAGRVDDGLKLCKHFGQTWRAAILEGWRLHEDPN FEQNVSVLHEKLPIEGNPRRDIWKRCAWMLADSKNYDEYSRATAGVFSGH LGSLKTLLHSNWHDLLWAHLKVQIDIRVESEIRGCCLKNYQPMPDDYWNG RMTMEQIFEELNVAKDASVRDFAQSQLGIIQRHLILDTCGELIQHMVRWV EKDTSQQSPHQLRFMAHIVLFLRQIGRVEQERQAEKIVAAYVEALIARGE PQLIAYYTASLSNPLQVQLYSRFLEQVEQKRPRELAVDAALQAGLDVEQI TRVTVQNIRLAHQPLGEFGEPQSGEISAIDQRKISALEWLIHLPEQRGEL LWQANAMIRTYLASSKVECMRQTFRMVPADIVQQLVSLYGSVDNIPPREE CCLKEYLCYKAYLSGVDSFVEWNRLQQNRPKKPQTSHAASSQDNFTERMA SERKEQAHRSEVVRWEHKVKEQAKQTIELLYNVLMFPDKGWLVDPFIAKL PENAVQLSWDHRLLQMEKLRSICIPEIALFLNEVMFKSGDFAGCVRLADE ISSENRQLYKVYTKHKLAELLAKIADASLELLNSKLDPWGYPITT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nup107-PA | 845 | CG6743-PA | 1..845 | 1..845 | 4416 | 100 | Plus |