![]() | BDGP Sequence Production Resources |
Search the DGRC for LD18835
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 188 |
Well: | 35 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG7080-RA |
Protein status: | LD18835.pep: gold |
Preliminary Size: | 1353 |
Sequenced Size: | 1182 |
Gene | Date | Evidence |
---|---|---|
CG7080 | 2001-01-01 | Release 2 assignment |
CG7080 | 2001-10-10 | Blastp of sequenced clone |
CG7080 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7080 | 2008-04-29 | Release 5.5 accounting |
CG7080 | 2008-08-15 | Release 5.9 accounting |
CG7080 | 2008-12-18 | 5.12 accounting |
1182 bp (1182 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061253
> LD18835.complete CCGGCGAAGAGTTCACAACGCGTCGAGTGTCCAACAAAAAAAGCGAGCAA GATGCCCTCCATATGGCTGTTAGTCTCGACGCTGGCTTTGGTTAGCTGCC AGGACTATCATTACCACCGTCCACAGACTCCTTTCGTTGCGGAATCTTAC CATCAGCACCAGCAGCCTCAAGCCACCAAGTTTGTGGTGCAGACTTTGGG TCGCACCTACGGTTTGGAAACCCAAAGGGCACCAGCCATCTATGAGGATT ATCAGACGCATATTGTGCAGCTCTTCCAGCAGCGACAGGTGCCGCAGTAT CATCAGGCTCCCCGCCAACAATTGCACACTTCTAGCTACCAGAATCCCCT GCTGGTCAGCGCCAACTACCAGGCCGGCACCGTGTCCTTGGCGCCTCCAG CTCCCGCTGCTCCTGCCCAGCCACTGACCAGCTATGGGCCACCTCACCTG CAGCACCAGTCACAGCCTCTGCAACCTCCACCGCAGACTCCCCAATACTT CCCCCAACAGCAGCAGCCACCTGCAAGCTATTTGCCACCTCAGCAGCCTG CCCAGAAATTGTTCTTCGGCAATCCGTTTCCCTATGCCCCTGTGACGACC GGCTCGGGGCAACAGGTGCTGGATGCAGGACATGGATCAGGTGTGGCGCC CAATGAAGTGCAGGCTCAGCTTTTGCAAGCCACCGGAGCTGCGCCACCAC AAACTCGAGTGGGTAACCAGGTGGCTCAGTCGCAGAGCTCCTCTTTGGAT GCCTATGACTACAAGCAGAGCACTCCCGGAGAAAACCGAGAGTACCAAAG GTTCGTCACCAGCTGCCCGGGAGGTGGAGCCTGCCAGCAGAAGGAGTTCA ATCCAGGCGAGGTGGATGAGAGCCACCAGCGGGTTCTGCAGACAGTGCGA GCCAGTACCCAACCTCGAGTGGAGGGCTGCTACAAGAGCCAGGTGATCTA TGTGCCAGCGGGAGCTGCTGTCAATAGTCAGGGTCAGTTGCGACCAAAGA ATCGACGCACTTTCGAGCGCAAGGAGCAGGTCCTCTCCAGATACCCCTAC AACTAAATGTCCTCTCTAATCTTACTCACCGAATTTCACATCGAATTAGT TGATATGCTTAGTTGTCAGTTTGTTGTTTGTTGTAAATAAATCGATCATT GTTTAAATTTTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7080.b | 1424 | CG7080.b | 17..1180 | 1..1164 | 5820 | 100 | Plus |
CG7080-RA | 1464 | CG7080-RA | 57..1220 | 1..1164 | 5820 | 100 | Plus |
CG7080.a | 1170 | CG7080.a | 85..1167 | 82..1164 | 5415 | 100 | Plus |
CG7080.a | 1170 | CG7080.a | 17..84 | 1..68 | 340 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2260..2461 | 358..557 | 130 | 57 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2727..2835 | 416..520 | 130 | 63.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6761..6911 | 398..547 | 130 | 58.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6743..6851 | 445..547 | 115 | 61.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18152909..18152990 | 1..81 | 98 | -> | Plus |
chr3R | 18153060..18154143 | 82..1161 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7080-RA | 1..1005 | 52..1056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7080-RA | 1..1005 | 52..1056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7080-RA | 1..1005 | 52..1056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7080-RA | 1..1005 | 52..1056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7080-RA | 1..1005 | 52..1056 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7080-RA | 1..1161 | 1..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7080-RA | 17..1177 | 1..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7080-RA | 17..1177 | 1..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7080-RA | 1..1161 | 1..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7080-RA | 18..1178 | 1..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22329317..22329397 | 1..81 | 100 | -> | Plus |
3R | 22329467..22330546 | 82..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22329317..22329397 | 1..81 | 100 | -> | Plus |
3R | 22329467..22330546 | 82..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22329317..22329397 | 1..81 | 100 | -> | Plus |
3R | 22329467..22330546 | 82..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18155039..18155119 | 1..81 | 100 | -> | Plus |
arm_3R | 18155189..18156268 | 82..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22070298..22071377 | 82..1161 | 100 | Plus | |
3R | 22070148..22070228 | 1..81 | 100 | -> | Plus |
Translation from 0 to 1055
> LD18835.hyp PAKSSQRVECPTKKASKMPSIWLLVSTLALVSCQDYHYHRPQTPFVAESY HQHQQPQATKFVVQTLGRTYGLETQRAPAIYEDYQTHIVQLFQQRQVPQY HQAPRQQLHTSSYQNPLLVSANYQAGTVSLAPPAPAAPAQPLTSYGPPHL QHQSQPLQPPPQTPQYFPQQQQPPASYLPPQQPAQKLFFGNPFPYAPVTT GSGQQVLDAGHGSGVAPNEVQAQLLQATGAAPPQTRVGNQVAQSQSSSLD AYDYKQSTPGENREYQRFVTSCPGGGACQQKEFNPGEVDESHQRVLQTVR ASTQPRVEGCYKSQVIYVPAGAAVNSQGQLRPKNRRTFERKEQVLSRYPY N*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7080-PA | 334 | CG7080-PA | 1..334 | 18..351 | 1785 | 100 | Plus |
Translation from 51 to 1055
> LD18835.pep MPSIWLLVSTLALVSCQDYHYHRPQTPFVAESYHQHQQPQATKFVVQTLG RTYGLETQRAPAIYEDYQTHIVQLFQQRQVPQYHQAPRQQLHTSSYQNPL LVSANYQAGTVSLAPPAPAAPAQPLTSYGPPHLQHQSQPLQPPPQTPQYF PQQQQPPASYLPPQQPAQKLFFGNPFPYAPVTTGSGQQVLDAGHGSGVAP NEVQAQLLQATGAAPPQTRVGNQVAQSQSSSLDAYDYKQSTPGENREYQR FVTSCPGGGACQQKEFNPGEVDESHQRVLQTVRASTQPRVEGCYKSQVIY VPAGAAVNSQGQLRPKNRRTFERKEQVLSRYPYN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18076-PA | 361 | GF18076-PA | 1..361 | 1..334 | 848 | 59.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11117-PA | 330 | GG11117-PA | 1..330 | 1..334 | 1173 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21108-PA | 346 | GH21108-PA | 1..346 | 4..334 | 441 | 41.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7080-PA | 334 | CG7080-PA | 1..334 | 1..334 | 1785 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10472-PA | 334 | GI10472-PA | 1..334 | 1..334 | 372 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23212-PA | 387 | GL23212-PA | 18..387 | 14..334 | 646 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20086-PA | 386 | GA20086-PA | 18..386 | 14..334 | 644 | 45.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26412-PA | 334 | GM26412-PA | 1..334 | 1..334 | 1516 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20932-PA | 334 | GD20932-PA | 1..334 | 1..334 | 1520 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23154-PA | 337 | GJ23154-PA | 17..337 | 17..334 | 520 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14249-PA | 379 | GK14249-PA | 142..379 | 92..334 | 569 | 54.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10280-PA | 346 | GE10280-PA | 1..346 | 1..334 | 1325 | 87.9 | Plus |