LD19025.complete Sequence
1157 bp (1157 high quality bases) assembled on 2004-03-31
GenBank Submission: BT012485
> LD19025.complete
AAGTTTCAAGATATGGTTTTAAAGCAATGGTTGGTCATGGATGATGCACT
TTTCCAAGCATGTGGGTTTTGTCTAGTTGCGGCATCTGATGACCAGTCGG
TGTTTATCACTTGGGACAAGTATTATTTGCTAAACATACGCTTTAAGATG
CCAGAGGACAGCTGCAGGATAAAAATGACTGCTGTGCGAATTCCTGTGCC
TAAAAGTGGAGGAGGCTATATTAGGAGTGTGCATGCTTTGAGGTACCGGT
AGAAAGTTGTGGAAATACATTCCGAGCAATTTTCAGTGGAAGAATAGTAC
CTGCGAAATACAGGTTGAACAATAAGCAATTTATGGAAAGGAAACCAAGT
ATACCAAAAATCAGGCAGGTCAGCAGTCTTGGAAGTCAATTCACTTTTCC
CAATATAGCGGATCTATTTTGCAATGCCGTCTCCATTCACAATGACTATT
GTAAATTGCATTTTATAAACGAAAAGTTGCAATTCCATTTAAATGGAATG
TTGGAAAGTAAAGATGCTTCAGCGATTTACTATTTTAAGCAACATATTAT
TCTAAACTCGGATCAACTGGAATCTGCATCCAAAAATTATGACATGACCT
TTCATACAATAATGAGCGACGTTGACCGATTTCGGTACCGACAATGTAAC
GACATCTTGGCCCCTGGAACAAATTTTTCCGTTTTAAAGTCAAAATATAA
TATCATTAGAAATGACATTCATTAAGAATTTTGCGTACATCGAAACTATT
CAATAACCTTTTACGCTCACTTTTCTTATTTATACCCTATAGTTAGATAA
ACTAAATCTAAATCTAATAAACTAAATCTAATCTAATCGTTCCAAGGCTT
GTACGTATGATATTTTAGACACCAGACCCATATCCAAAAGTTGTCATTGT
GTAATCCTCTTCTCTGCATTATTAAGAAAATTATTGAATTGTGTCTATCA
CAAGCGCAAAGATCATCCCATCAGAACTATGCTATGTGATTTTTGAAGTA
ATAGCGCAAACATTGTTGTTGTCTGGACTTTAGATGATAAATCAATCGCT
CAGCTACAAGATAAACATTTTGTACAAGAAAAATATAATGAGTATATATG
CTTAGTTATAAAACAAATAAAATATTCTTAAGATGTTAAAAAAAAAAAAA
AAAAAAA
LD19025.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:02:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17490.a | 1819 | CG17490.a | 222..1358 | 1..1137 | 5685 | 100 | Plus |
CG17490-RA | 1518 | CG17490-RA | 222..1358 | 1..1137 | 5685 | 100 | Plus |
CG17490-RC | 1381 | CG17490-RC | 112..486 | 242..616 | 1875 | 100 | Plus |
CG17490-RC | 1381 | CG17490-RC | 84..114 | 1..31 | 155 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:58:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 22431618..22432141 | 614..1137 | 2620 | 100 | Plus |
chr2L | 23010047 | chr2L | 22431188..22431565 | 237..614 | 1875 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 22429568..22429813 | 1..246 | 1230 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:06:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:58:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22540377..22540900 | 614..1137 | 2620 | 100 | Plus |
2L | 23513712 | 2L | 22539947..22540324 | 237..614 | 1875 | 99.7 | Plus |
2L | 23513712 | 2L | 22538327..22538572 | 1..246 | 1230 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:51:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22540377..22540900 | 614..1137 | 2620 | 100 | Plus |
2L | 23513712 | 2L | 22539947..22540324 | 237..614 | 1875 | 99.7 | Plus |
2L | 23513712 | 2L | 22538327..22538572 | 1..246 | 1230 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 11:58:37 has no hits.
LD19025.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:59:17 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 22429568..22429809 | 1..242 | 100 | -> | Plus |
chr2L | 22431194..22431565 | 243..614 | 100 | -> | Plus |
chr2L | 22431619..22432141 | 615..1137 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:53:33 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17490-RB | 37..278 | 1..242 | 100 | -> | Plus |
CG17490-RB | 1663..2145 | 243..725 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:38:24 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17490-RE | 16..257 | 1..242 | 100 | -> | Plus |
CG17490-RE | 1642..2124 | 243..725 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 12:52:33 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17490-RE | 16..257 | 1..242 | 100 | -> | Plus |
CG17490-RE | 1642..2124 | 243..725 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:22:10 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17490-RB | 37..278 | 1..242 | 100 | -> | Plus |
CG17490-RB | 1663..2145 | 243..725 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:32:27 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17490-RE | 16..257 | 1..242 | 100 | -> | Plus |
CG17490-RE | 1642..2124 | 243..725 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:46:24 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17490-RA | 1..1134 | 1..1134 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:38:23 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17490-RA | 1..1134 | 1..1134 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:52:33 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17490-RA | 98..1234 | 1..1137 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:22:11 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17490-RA | 1..1134 | 1..1134 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:32:27 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17490-RA | 98..1234 | 1..1137 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:59:17 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22538327..22538568 | 1..242 | 100 | -> | Plus |
2L | 22539953..22540324 | 243..614 | 100 | -> | Plus |
2L | 22540378..22540900 | 615..1137 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:59:17 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22538327..22538568 | 1..242 | 100 | -> | Plus |
2L | 22539953..22540324 | 243..614 | 100 | -> | Plus |
2L | 22540378..22540900 | 615..1137 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:59:17 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22538327..22538568 | 1..242 | 100 | -> | Plus |
2L | 22539953..22540324 | 243..614 | 100 | -> | Plus |
2L | 22540378..22540900 | 615..1137 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:52:33 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22431059..22431300 | 1..242 | 100 | -> | Plus |
arm_2L | 22432685..22433056 | 243..614 | 100 | -> | Plus |
arm_2L | 22433110..22433632 | 615..1137 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:59:37 Download gff for
LD19025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22539953..22540324 | 243..614 | 100 | -> | Plus |
2L | 22538327..22538568 | 1..242 | 100 | -> | Plus |
2L | 22540378..22540900 | 615..1137 | 100 | | Plus |
LD19025.hyp Sequence
Translation from 332 to 724
> LD19025.hyp
MERKPSIPKIRQVSSLGSQFTFPNIADLFCNAVSIHNDYCKLHFINEKLQ
FHLNGMLESKDASAIYYFKQHIILNSDQLESASKNYDMTFHTIMSDVDRF
RYRQCNDILAPGTNFSVLKSKYNIIRNDIH*
LD19025.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:32:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17490-PF | 130 | CG17490-PF | 1..130 | 1..130 | 686 | 100 | Plus |
CG17490-PA | 130 | CG17490-PA | 1..130 | 1..130 | 686 | 100 | Plus |
CG17490-PG | 707 | CG17490-PG | 578..707 | 1..130 | 686 | 100 | Plus |
CG17490-PE | 707 | CG17490-PE | 578..707 | 1..130 | 686 | 100 | Plus |
CG17490-PD | 103 | CG17490-PD | 1..94 | 1..94 | 494 | 100 | Plus |
LD19025.pep Sequence
Translation from 332 to 724
> LD19025.pep
MERKPSIPKIRQVSSLGSQFTFPNIADLFCNAVSIHNDYCKLHFINEKLQ
FHLNGMLESKDASAIYYFKQHIILNSDQLESASKNYDMTFHTIMSDVDRF
RYRQCNDILAPGTNFSVLKSKYNIIRNDIH*
LD19025.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:22:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17490-PG | 707 | CG17490-PG | 578..707 | 1..130 | 686 | 100 | Plus |
CG17490-PE | 707 | CG17490-PE | 578..707 | 1..130 | 686 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:29:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM26731-PA | 707 | GM26731-PA | 578..707 | 1..130 | 584 | 85.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:29:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD17705-PA | 707 | GD17705-PA | 578..707 | 1..130 | 583 | 85.4 | Plus |