BDGP Sequence Production Resources |
Search the DGRC for LD19034
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 190 |
Well: | 34 |
Vector: | pBS SK- |
Associated Gene/Transcript | endos-RB |
Protein status: | LD19034.pep: gold |
Preliminary Size: | 1335 |
Sequenced Size: | 1098 |
Gene | Date | Evidence |
---|---|---|
CG6513 | 2001-01-01 | Release 2 assignment |
CG6513 | 2002-05-31 | Blastp of sequenced clone |
CG6513 | 2003-01-01 | Sim4 clustering to Release 3 |
endos | 2008-04-29 | Release 5.5 accounting |
endos | 2008-08-15 | Release 5.9 accounting |
endos | 2008-12-18 | 5.12 accounting |
1098 bp (1098 high quality bases) assembled on 2002-05-31
GenBank Submission: AY118326
> LD19034.complete AGACAGTCTTGCGTCTGTAAAGTGATAAAATAATTTTACAATTGAGTCGC CTTGGGAATTTCAGTCACTCTCCACACACCAAATACATAGCTCGTGTAAC AGCCTGATTTAGTCGAACAGCACATCATTTGCCGGAATCGTTAGCGAATA GCAGCACTCTCCGCTAAGTCGGCACGCTAATTGGCAAAACCGATTCGATT CCAGGGAAGGAGACACACTGATAGACGGGTGAAGAACAAAAGGAGAAGGA AAACAACAGTTAATCGTCAAATTTTACAGGCAAAAGGCAGCACACAATGA GCTCCGCGGAAGAAAACAGCAACAGCCCGGCCACCACGCCCCAGGACACC GAGACCACCGAGCAGGCTAACCTCACGGATCTCGAGAAGATCGAGGAGGA GAAACTCAAGTCCAAGTATCCCAGCGGAATGCGCGTGCCGGGCGGACACT CGGCCTTCCTCCAGAAAAGGCTGCAGAAGGGGCAAAAGTTCTTCGACTCG GGCGATTACCAGATGGCCAAGCAGAAGGGTGGCGGCGTCAAGCAGGTCTT TGCCAACAAGGTGACCACCGGGGAGGCCATTCCCACGCCCGAAACCGTGC CGGCGCGCAAGACTTCGATCATCCAACCCTGTAACAAGTTCCCGGCGACG AGCTAATTTACTCACCACTCAACACTCACCTCTACTGTATCCACAACCTC AAGTGCAGCCAGTTCTCCGTTCCCCACTTCAAATGCTCTATACCTAATTT TAATGAAAAACCTAATGCTAAGATGGCTGCTGCCGGATTGTGCGGGCATT TCGCGACAGTTTAAACTGAAATTCTAGCACCATGTTCCGTGTTTCCCCCG TTAAATTCAATCGCCATCCGCACTGGCCAATCAATCTCAAGATCAACTCA TCAGTCCATCTCTCAGGCCGGGGAAGCGAAGATGGCGAGCCGAGCAGCGC GAAATTTATTGCAACAGTTATATATATCTCTATCTTTGTAACATTAAACT AACTTACCCTCGTCGTACATAGTTGTAAGTATTACGAGCATAATAAATTT AAGTTGGAGCAGCCAGCCACACACACACAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
endos-RA | 1453 | endos-RA | 77..1155 | 1..1079 | 5395 | 100 | Plus |
endos.a | 1409 | endos.a | 370..1164 | 285..1079 | 3975 | 100 | Plus |
endos-RB | 1343 | endos-RB | 305..1098 | 286..1079 | 3970 | 100 | Plus |
endos.a | 1409 | endos.a | 31..316 | 1..286 | 1430 | 100 | Plus |
endos-RB | 1343 | endos-RB | 1..225 | 63..287 | 1125 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 14019920..14020516 | 1078..482 | 2970 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 14021486..14021772 | 287..1 | 1375 | 98.6 | Minus |
chr3L | 24539361 | chr3L | 14020904..14021101 | 482..285 | 975 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 14029824..14030421 | 1079..482 | 2990 | 100 | Minus |
3L | 28110227 | 3L | 14031388..14031674 | 287..1 | 1435 | 100 | Minus |
3L | 28110227 | 3L | 14030807..14031004 | 482..285 | 990 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 14022924..14023521 | 1079..482 | 2990 | 100 | Minus |
3L | 28103327 | 3L | 14024488..14024774 | 287..1 | 1435 | 100 | Minus |
3L | 28103327 | 3L | 14023907..14024104 | 482..285 | 990 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 14019920..14020515 | 483..1078 | 99 | <- | Minus |
chr3L | 14020904..14021099 | 287..482 | 99 | <- | Minus |
chr3L | 14021487..14021772 | 1..286 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
endos-RB | 1..360 | 297..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
endos-RC | 1..360 | 297..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
endos-RD | 1..360 | 297..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
endos-RB | 1..360 | 297..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
endos-RD | 1..360 | 297..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
endos-RA | 31..1108 | 1..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
endos-RA | 31..1108 | 1..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
endos-RA | 33..1110 | 1..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
endos-RA | 31..1108 | 1..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
endos-RA | 33..1110 | 1..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14031389..14031674 | 1..286 | 100 | Minus | |
3L | 14029825..14030420 | 483..1078 | 100 | <- | Minus |
3L | 14030807..14031002 | 287..482 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14031389..14031674 | 1..286 | 100 | Minus | |
3L | 14029825..14030420 | 483..1078 | 100 | <- | Minus |
3L | 14030807..14031002 | 287..482 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14031389..14031674 | 1..286 | 100 | Minus | |
3L | 14029825..14030420 | 483..1078 | 100 | <- | Minus |
3L | 14030807..14031002 | 287..482 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 14024489..14024774 | 1..286 | 100 | Minus | |
arm_3L | 14022925..14023520 | 483..1078 | 100 | <- | Minus |
arm_3L | 14023907..14024102 | 287..482 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14022925..14023520 | 483..1078 | 100 | <- | Minus |
3L | 14023907..14024102 | 287..482 | 100 | <- | Minus |
3L | 14024489..14024774 | 1..286 | 100 | Minus |
Translation from 296 to 655
> LD19034.hyp MSSAEENSNSPATTPQDTETTEQANLTDLEKIEEEKLKSKYPSGMRVPGG HSAFLQKRLQKGQKFFDSGDYQMAKQKGGGVKQVFANKVTTGEAIPTPET VPARKTSIIQPCNKFPATS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
endos-PF | 119 | CG6513-PF | 1..119 | 1..119 | 614 | 100 | Plus |
endos-PE | 119 | CG6513-PE | 1..119 | 1..119 | 614 | 100 | Plus |
endos-PD | 119 | CG6513-PD | 1..119 | 1..119 | 614 | 100 | Plus |
endos-PC | 119 | CG6513-PC | 1..119 | 1..119 | 614 | 100 | Plus |
endos-PB | 119 | CG6513-PB | 1..119 | 1..119 | 614 | 100 | Plus |
Translation from 296 to 655
> LD19034.pep MSSAEENSNSPATTPQDTETTEQANLTDLEKIEEEKLKSKYPSGMRVPGG HSAFLQKRLQKGQKFFDSGDYQMAKQKGGGVKQVFANKVTTGEAIPTPET VPARKTSIIQPCNKFPATS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24489-PA | 119 | GF24489-PA | 1..119 | 1..119 | 608 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13739-PA | 118 | GG13739-PA | 1..118 | 1..119 | 594 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15121-PA | 119 | GH15121-PA | 1..119 | 1..119 | 517 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
endos-PF | 119 | CG6513-PF | 1..119 | 1..119 | 614 | 100 | Plus |
endos-PE | 119 | CG6513-PE | 1..119 | 1..119 | 614 | 100 | Plus |
endos-PD | 119 | CG6513-PD | 1..119 | 1..119 | 614 | 100 | Plus |
endos-PC | 119 | CG6513-PC | 1..119 | 1..119 | 614 | 100 | Plus |
endos-PB | 119 | CG6513-PB | 1..119 | 1..119 | 614 | 100 | Plus |
endos-PA | 119 | CG6513-PA | 1..119 | 1..119 | 614 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13773-PA | 118 | GI13773-PA | 1..118 | 1..119 | 535 | 90 | Plus |
Dmoj\GI16393-PA | 96 | GI16393-PA | 11..92 | 29..113 | 212 | 58.1 | Plus |
Dmoj\GI10097-PA | 118 | GI10097-PA | 11..102 | 19..111 | 186 | 47.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25060-PA | 120 | GL25060-PA | 1..120 | 1..119 | 541 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19653-PA | 120 | GA19653-PA | 1..120 | 1..119 | 541 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24562-PA | 119 | GM24562-PA | 1..119 | 1..119 | 612 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12636-PA | 119 | GD12636-PA | 1..119 | 1..119 | 612 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13577-PA | 118 | GJ13577-PA | 1..118 | 1..119 | 544 | 90 | Plus |
Dvir\GJ23833-PA | 126 | GJ23833-PA | 6..102 | 7..106 | 302 | 61 | Plus |
Dvir\GJ17011-PA | 116 | GJ17011-PA | 1..109 | 1..111 | 283 | 60.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17252-PA | 121 | GK17252-PA | 1..121 | 1..119 | 554 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20034-PA | 119 | GE20034-PA | 1..119 | 1..119 | 603 | 96.6 | Plus |