Clone LD19052 Report

Search the DGRC for LD19052

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:190
Well:52
Vector:pBS SK-
Associated Gene/Transcriptbru-2-RA
Protein status:LD19052.pep: gold
Preliminary Size:2464
Sequenced Size:3975

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17010 2001-01-01 Release 2 assignment
CG6319 2001-01-01 Release 2 assignment
CG17008 2001-01-01 Release 2 assignment
CG31761 2001-11-27 Blastp of sequenced clone
CG31761 2003-01-01 Sim4 clustering to Release 3
bru-2 2008-04-29 Release 5.5 accounting
bru-2 2008-08-15 Release 5.9 accounting
bru-2 2008-12-18 5.12 accounting

Clone Sequence Records

LD19052.complete Sequence

3975 bp (3975 high quality bases) assembled on 2001-11-27

GenBank Submission: AY069464

> LD19052.complete
TCTCCTTCGTTGAATTCGATCAGTGCAGATCGCGAGTGCTTTTGAGTGAT
TTACCTGATTGATTTACCTGGTATCTGCAGTTAAACGCCCTTGATATCTG
ACCCAGATAAGGCCATTGTGGCATAAGGTGTGATCAAATTCGAAATAGAA
ACTGGCTCAAAATCAAATGTATCTGCCAGGAACTTAAAACAATTTTTTAT
TTCGATCTAAAACTCCAGCTCCACCCTTTATAAAAGTTAAAAAACAAAAA
GCGTAAACGCAGAGGCTAATTGTGAAAACGAAAATAAAAACACTGTGATA
AAGAAGGCATAAACAAAAGGGGGACTGAACTAAACACAGAAAGAGGACCC
TCCTGCCGGCAGCAAAATAATATACAATTTTAATAAAACTAAAACCCGAA
GCAAATTAAAAAGCAAGCGACGCCAAATGCGGCACTAAAAGTAATTAGCG
ACAGGAGCTGCAGGAGTTGGCAATAAAAACAAAGCAGAGGTGTAATAAAT
GATGTTGCAATCCTTGAGTCTGCACGCGGATAAACTAAGCGGCAATTCAC
CAGCAGCAGCAGCAGCAACTGGAGCAGCAGCAGCAACATCAGAGGCAACA
GCAGTAGCATCCGCAGCAGCAGCAACAACAATGCTTGCAACGGCACCTGT
TGCCCATGTTGCTAATGGCAACAACAGCAATTCGAGTGCCGGCAGCAGCA
GCAACAGCAACAGCAGCAGCAACAACCACAGCCTCTACAGCAATAACAAT
TTAAATACAGGCAACAATAGCCAGCAGCAGCAGCAGCAGCAGCAGCAACA
TCCGCAAATACTGCCGGTCAAGTACGAGTATTTAGAGAATCTAACGAGCT
CGGGCGCAACTTCAGGTGCCATTGCAGCGACAACAACTTTCACGGGAGCT
GCGAAAAGTTTTCATCCCTATTTGCGGCCCACCGGCAGTGGCAGCAACAG
CAACAACAGCATCGCAGCATTATCTACAACAACGGCAGCAACAGCGGCTA
AAATGTCGACAACATTGTTTGAGACACTCTTGCACAACCAAATAAATTCC
AGCCCAATAGCACTGCCAGCAGCAACGGCAATCGCAGCAATATCTGCAGC
AGCAACAGCAGCAACAGCAACACCAGGCACCGCAGCAACCGCAGCAGCTG
CCGCTGCAGCAGCACCGTCAACGCAGCTGAATTCCAGCATTAATTCCAGA
ACTTCATTAGGCGACCAGGGTGGTGCAATTGTTGTTGTTACCCCCGCACC
ACCCGTTGCTGCACCACCAACTGGCGGCCCAAATCGCAACCAAAGTCCCA
CGCGTGACTGCTCGGTCAAAATGGAGCTCATGGAATCGACCAGCCCGGAT
TCGATCAAGGATCAGCCGGATGCGGACAATATCAAGATGTTCGTGGGCCA
AATACCGAAGACCTGGGACGAGACGAGGCTACGCCAAATGTTCGAGCAGT
TCGGACCCGTTCACACACTGAATGTGCTACGGGACAAGGTCACATCGATT
AGCCGAGGGTGCTGTTTTGTCACCTACTATACAAGAAAGGCCGCCCTGCG
CGCCCAGGACGCGTTGCACAACATCAAGACCTTGGATGGGATGCACCATC
CCATTCAGATGAAGCCGGCGGATAGTGAGAACAGAAATGAACGTAAACTT
TTCGTTGGCATGCTGAACAAAAAGTACACCGAGGCCGATGTGAGGCAGCT
CTTCACGGGCCACGGAACCATCGAGGAGTGCACAGTGCTCCGGGATCAGG
CTGGTCAGAGCAAGGGCTGCGCCTTCGTCACATTCGCCACTAAGCAGAAC
GCCATTGGAGCTATAAAGGCCCTCCATCAAAGTCAGACCATGGAAGGCTG
TTCAGCTCCGCTGGTTGTGAAATTCGCCGACACGCAAAAGGAAAAAGACC
AAAAGAAGATGCAGCAGATTCACGCATTCTGTGGCATCAATACGCCGAGC
GGTGCGACAGCAGGTGCGGCCACGCCCACCATTAATGCCGCAACGGCTCT
AATAGCTGCTCCGCCCTCGGCGGGACGTACCAATCCGTCGATGGCGGCCG
CACTGGCGGCAGTGCCTCAGGTTCAGCAGGCTGGTTCTGCAGCAACGGCA
CCAACCACCCTCGTTCCCCTGAATTCCACCACCGCCCTCAGTGCGTCCTT
GACGCCCAATCTCCTAGCCACCAATGCCGCCCACCAGGGGGCGGCAGCTG
CGGCCGCCTATTTGGGGGCAGATCCCGCTGCGGCGGCCCACCTTCAGCTG
TACCAACAACTACACGGATACGGACTGAGTCCGGCACACTATCTGCCAGA
TGAGTCAAAAAAAAGTACAAAGGAAAAGAAAAAAACGTCTTCGTCTACCG
TTTTCCCTGCTTTTCTTTGCCCATTTTCCGACTTGCAATTTTTATAAGAC
TTTGCCAAAGGCCCCAAGGGCAAAAGGCACCATCAAAGGTGGCCGAAAAG
AAGGGGCGTCCCATATACACATACATAGTGTATGGTAAAAAAAAGATAGC
CCCAATAGCCCGAGGTCTGGCAGGTAAACAAATGCAATTCCAATGTGGCA
ACAGCAAGAACCTGAAGTTATCCGCAGGGCCTCCAAATGCCGCCGACCCC
TATTCATCCTCGCTGAGCGGACTGACAAATGGAGCCGCCTACGGAGCCGC
ATCTCAACCTGTGACCACCAGCGCCCTTCAAGCGGCAGCTGCCGGCGTGA
CTGGCAAGCAGATCGAGGGTCCCGATGGCAGCAATCTTTTCATTTATCAC
CTACCTCAGGAGTTCATTGACACAGATCTCGCGTCGACGTTTCTTCCCTT
CGGCAATGTCCTTTCGGCCAAGGTGTTCATCGATAAGCAGACCAACCTGT
CGAAGTGTTTCGGCTTTGTGTCCTACGATAATCCCCACTCGGCCAACGCC
GCTATCCAGGCGATGCATGGCTTTCAAATCGGCAGCAAGCGGCTGAAGGT
CCAACTTAAACGTTCCAAGGATGCGGCTAAGCCGTACTAGGCAGCTAAGA
AATGGGCTAAAATGGCTTAAATGGGCGTGGCCATGGAGGCACCCAACAAC
ACCAGCAATTCACAACTAATAGAATGAAACTAGTTTAAACAATTGTGCCT
TTTAAGCAACGTTCTGAAACCAAAGGACCAATTACAAAAATGTATCTGAT
AAGTGAACAAAAAACTGAAAATAAATAGAAAGCTTACAAATAAAGTTCTC
GAGTGCACAAAAACGAAACGCAAAAATCAACCCTACCAAAGAAGTAGCTT
AAAAGTTGCATCCCTCTTGTAATCACATTTGCTGAATACCATCAACATTT
TCATTAAATCTACCTAACTATTCAACGTGGTCGGCAAACAAATCCTACAA
AATAAAAACTAAATGCATAAAATACAGAAATTGTTAACTGCGTTGTGGCG
CCAAAGTATTTTTCAAAGCCAAATAGTTAAGCAAACAGAAGAGTAAAACC
AATAATGAAGAGAAAATGTAACTTGTGCACCAACCAAGAGATAAAACATA
GAAAAATAATATCTAGATTAAATTTAAGGAAATAAATATTATAATAAAAT
GTAGCGGGGCGCAGTCCAACGTAAAAAACATTCGAAATTCCGCTCGTAGT
GAGAAACATTTAAGGAGATAGCTAAAAATAATTCAACTAAAGTAAATTTA
ATAAAAAACATTTTGAAACCCAAGTGAACAACTAACTAATTTATCCAGCT
AAATGAAAATGAAGCTGTTGAAGTTTATTTTAAACTTATATTTTATTCAT
TACGAAAATCTTAACCCAAAACATAAATTGTACTTAAAATGTTCTTGATG
TTAGAGGGCAAAATTAAATTGAATAAAATCAGACAAATAAATGTAAAATG
TAATGTAGTTTGTAATTAGCTTAACATTTTACTGAAAGGTATAGAAAACA
TAAATAAAATCAAGCGGTTTCAAAGATTTACAAATAAAACATATTTAAAA
ACATAAAAAAAAAAAAAAAAAAAAA

LD19052.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:56:07
Subject Length Description Subject Range Query Range Score Percent Strand
bru-2-RA 3960 bru-2-RA 1..3955 1..3955 19775 100 Plus
bru-2.b 4130 bru-2.b 171..4125 1..3955 19775 100 Plus
bru-2-RC 3924 bru-2-RC 166..3919 202..3955 18755 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:29:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 12394896..12396132 2718..3954 6185 100 Plus
chr2L 23010047 chr2L 12350334..12351413 207..1286 5400 100 Plus
chr2L 23010047 chr2L 12387772..12388260 1817..2305 2415 99.6 Plus
chr2L 23010047 chr2L 12390537..12390810 2307..2578 1245 97.8 Plus
chr2L 23010047 chr2L 12356671..12356893 1286..1508 1115 100 Plus
chr2L 23010047 chr2L 12346780..12346989 1..210 1035 99.5 Plus
chr2L 23010047 chr2L 12384170..12384350 1639..1819 890 99.4 Plus
chr2L 23010047 chr2L 12394502..12394646 2576..2720 710 99.3 Plus
chr2L 23010047 chr2L 12309338..12309567 2721..2950 445 79.6 Plus
chr2L 23010047 chr2L 12358230..12358314 1506..1590 425 100 Plus
chr2L 23010047 chr2L 12361243..12361292 1590..1639 250 100 Plus
chr2L 23010047 chr2L 12297283..12297369 1710..1796 240 85.1 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:06:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:29:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12396292..12397529 2718..3955 6190 100 Plus
2L 23513712 2L 12351704..12352783 207..1286 5400 100 Plus
2L 23513712 2L 12389188..12389676 1817..2305 2430 99.8 Plus
2L 23513712 2L 12391927..12392207 2298..2578 1405 100 Plus
2L 23513712 2L 12358040..12358262 1286..1508 1115 100 Plus
2L 23513712 2L 12348150..12348359 1..210 1035 99.5 Plus
2L 23513712 2L 12385561..12385741 1639..1819 905 100 Plus
2L 23513712 2L 12395898..12396042 2576..2720 725 100 Plus
2L 23513712 2L 12310684..12310913 2721..2950 445 79.6 Plus
2L 23513712 2L 12359599..12359683 1506..1590 425 100 Plus
2L 23513712 2L 12362600..12362649 1590..1639 250 100 Plus
2L 23513712 2L 12298638..12298724 1710..1796 240 85.1 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:21:29
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12396292..12397529 2718..3955 6190 100 Plus
2L 23513712 2L 12351704..12352783 207..1286 5400 100 Plus
2L 23513712 2L 12389188..12389676 1817..2305 2430 99.7 Plus
2L 23513712 2L 12391927..12392207 2298..2578 1405 100 Plus
2L 23513712 2L 12358040..12358262 1286..1508 1115 100 Plus
2L 23513712 2L 12348150..12348359 1..210 1035 99.5 Plus
2L 23513712 2L 12385561..12385741 1639..1819 905 100 Plus
2L 23513712 2L 12395898..12396042 2576..2720 725 100 Plus
2L 23513712 2L 12310684..12310913 2721..2950 445 79.5 Plus
2L 23513712 2L 12359599..12359683 1506..1590 425 100 Plus
2L 23513712 2L 12362600..12362649 1590..1639 250 100 Plus
2L 23513712 2L 12298638..12298724 1710..1796 240 85 Plus
3R 31820162 3R 23133493..23133565 626..551 220 88.1 Minus
3R 31820162 3R 2338108..2338186 629..551 215 84.8 Minus
3R 31820162 3R 2125569..2125647 629..551 215 84.8 Minus
3L 28103327 3L 25914271..25914349 629..551 215 84.8 Minus
2R 25260384 2R 10235188..10235259 630..559 210 86.1 Minus
2R 25260384 2R 18282389..18282468 630..551 205 83.7 Minus
3L 28103327 3L 15219885..15219962 631..554 195 83.3 Minus
Blast to na_te.dros performed 2019-03-15 11:29:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2273..2856 561..1172 576 59.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6716..6923 530..741 410 69.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6755..7226 548..1003 379 58 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..7217 669..1150 366 58.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6923 598..805 361 65.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6910 615..816 353 67.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2493..2983 548..1014 292 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2596..2968 447..806 265 58.5 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 1190..1694 3446..3950 211 53.4 Plus
Dbif\P-element_O 2986 Dbif\P-element_O P_O 2986bp Derived from X71634. 2548..2799 3604..3849 210 57.3 Plus
rover 7318 rover ROVER 7318bp 508..1083 3051..3646 210 55 Plus
roo 9092 roo DM_ROO 9092bp 1075..1153 668..749 187 72 Plus
rover 7318 rover ROVER 7318bp 753..1096 3139..3502 186 56.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1536..1623 669..758 184 68.9 Plus
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 681..841 3134..3299 169 60.9 Plus
rover 7318 rover ROVER 7318bp 904..958 3139..3193 140 72.7 Plus
HB 1653 HB DMTHB1 1653bp Derived from X01748 (g8693) (Rel. 49, Last updated, Version 3). 921..1067 3848..3704 134 60 Minus
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 652..790 364..500 123 56.4 Plus
TAHRE 10463 TAHRE OSV 10463bp 8576..8700 3062..3190 122 58.5 Plus
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 126..210 3873..3953 119 64 Plus

LD19052.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:30:19 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 12356672..12356892 1287..1507 100 -> Plus
chr2L 12358232..12358314 1508..1590 100 -> Plus
chr2L 12361244..12361292 1591..1639 100 -> Plus
chr2L 12384171..12384349 1640..1818 99 -> Plus
chr2L 12346780..12346985 1..206 100 -> Plus
chr2L 12350334..12350663 207..536 100 == Plus
chr2L 12350759..12350819 632..692 100 == Plus
chr2L 12350936..12351062 809..935 100 == Plus
chr2L 12351143..12351189 1016..1062 100 == Plus
chr2L 12351310..12351413 1183..1286 100 -> Plus
chr2L 12387774..12388254 1819..2299 99 -> Plus
chr2L 12390529..12390809 2300..2577 97 -> Plus
chr2L 12394504..12394644 2578..2718 99 -> Plus
chr2L 12394897..12396132 2719..3954 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:24:47 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
bru-2-RC 1..1899 499..2397 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:27:38 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
bru-2-RC 1..1899 499..2397 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:29:59 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
bru-2-RA 1..1899 499..2397 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:55:14 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
bru-2-RC 1..1899 499..2397 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:36:29 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
bru-2-RA 1..1899 499..2397 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:24:46 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
bru-2-RA 1..3954 1..3954 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:27:38 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
bru-2-RA 1..3954 1..3954 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:29:59 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
bru-2-RA 34..3987 1..3954 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:55:14 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
bru-2-RA 1..3954 1..3954 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:36:29 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
bru-2-RA 34..3987 1..3954 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:30:19 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12348150..12348355 1..206 100 -> Plus
2L 12351704..12352783 207..1286 100 -> Plus
2L 12358041..12358261 1287..1507 100 -> Plus
2L 12359601..12359683 1508..1590 100 -> Plus
2L 12362601..12362649 1591..1639 100 -> Plus
2L 12385562..12385740 1640..1818 100 -> Plus
2L 12389190..12389670 1819..2299 100 -> Plus
2L 12391929..12392206 2300..2577 100 -> Plus
2L 12395900..12396040 2578..2718 100 -> Plus
2L 12396293..12397528 2719..3954 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:30:19 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12348150..12348355 1..206 100 -> Plus
2L 12351704..12352783 207..1286 100 -> Plus
2L 12358041..12358261 1287..1507 100 -> Plus
2L 12359601..12359683 1508..1590 100 -> Plus
2L 12362601..12362649 1591..1639 100 -> Plus
2L 12385562..12385740 1640..1818 100 -> Plus
2L 12389190..12389670 1819..2299 100 -> Plus
2L 12391929..12392206 2300..2577 100 -> Plus
2L 12395900..12396040 2578..2718 100 -> Plus
2L 12396293..12397528 2719..3954 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:30:19 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12348150..12348355 1..206 100 -> Plus
2L 12351704..12352783 207..1286 100 -> Plus
2L 12358041..12358261 1287..1507 100 -> Plus
2L 12359601..12359683 1508..1590 100 -> Plus
2L 12362601..12362649 1591..1639 100 -> Plus
2L 12385562..12385740 1640..1818 100 -> Plus
2L 12389190..12389670 1819..2299 100 -> Plus
2L 12391929..12392206 2300..2577 100 -> Plus
2L 12395900..12396040 2578..2718 100 -> Plus
2L 12396293..12397528 2719..3954 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:29:59 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12348150..12348355 1..206 100 -> Plus
arm_2L 12351704..12352783 207..1286 100 -> Plus
arm_2L 12358041..12358261 1287..1507 100 -> Plus
arm_2L 12359601..12359683 1508..1590 100 -> Plus
arm_2L 12362601..12362649 1591..1639 100 -> Plus
arm_2L 12385562..12385740 1640..1818 100 -> Plus
arm_2L 12389190..12389670 1819..2299 100 -> Plus
arm_2L 12391929..12392206 2300..2577 100 -> Plus
arm_2L 12395900..12396040 2578..2718 100 -> Plus
arm_2L 12396293..12397528 2719..3954 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:31:15 Download gff for LD19052.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12395900..12396040 2578..2718 100 -> Plus
2L 12351704..12352783 207..1286 100 -> Plus
2L 12358041..12358261 1287..1507 100 -> Plus
2L 12359601..12359683 1508..1590 100 -> Plus
2L 12362601..12362649 1591..1639 100 -> Plus
2L 12385562..12385740 1640..1818 100 -> Plus
2L 12389190..12389670 1819..2299 100 -> Plus
2L 12391929..12392206 2300..2577 100 -> Plus
2L 12396293..12397528 2719..3954 100   Plus
2L 12348150..12348355 1..206 100 -> Plus

LD19052.pep Sequence

Translation from 498 to 2396

> LD19052.pep
MMLQSLSLHADKLSGNSPAAAAATGAAAATSEATAVASAAAATTMLATAP
VAHVANGNNSNSSAGSSSNSNSSSNNHSLYSNNNLNTGNNSQQQQQQQQQ
HPQILPVKYEYLENLTSSGATSGAIAATTTFTGAAKSFHPYLRPTGSGSN
SNNSIAALSTTTAATAAKMSTTLFETLLHNQINSSPIALPAATAIAAISA
AATAATATPGTAATAAAAAAAAPSTQLNSSINSRTSLGDQGGAIVVVTPA
PPVAAPPTGGPNRNQSPTRDCSVKMELMESTSPDSIKDQPDADNIKMFVG
QIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAAL
RAQDALHNIKTLDGMHHPIQMKPADSENRNERKLFVGMLNKKYTEADVRQ
LFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEG
CSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATA
LIAAPPSAGRTNPSMAAALAAVPQVQQAGSAATAPTTLVPLNSTTALSAS
LTPNLLATNAAHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLP
DESKKSTKEKKKTSSSTVFPAFLCPFSDLQFL*

LD19052.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:26:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14192-PA 852 GF14192-PA 377..592 287..495 868 71.8 Plus
Dana\GF19660-PA 215 GF19660-PA 1..213 388..602 765 80.9 Plus
Dana\GF14193-PA 519 GF14193-PA 399..505 274..380 591 93.5 Plus
Dana\bru-3-PA 422 GF10965-PA 35..147 365..474 342 58.4 Plus
Dana\GF14992-PA 660 GF14992-PA 93..283 289..477 212 30.3 Plus
Dana\GF14193-PA 519 GF14193-PA 383..502 346..463 160 34.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:26:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23780-PA 646 GG23780-PA 1..646 1..632 2099 84.3 Plus
Dere\GG23776-PA 837 GG23776-PA 366..578 289..495 861 71.8 Plus
Dere\bru-3-PA 422 GG13757-PA 35..147 365..474 342 58.4 Plus
Dere\GG24901-PA 446 GG24901-PA 107..297 289..477 208 30.8 Plus
Dere\GG17637-PA 335 GG17637-PA 70..252 280..463 189 28.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:26:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11645-PA 791 GH11645-PA 1..649 1..600 1268 56.3 Plus
Dgri\GH11642-PA 833 GH11642-PA 363..578 287..495 855 70.8 Plus
Dgri\GH14684-PA 421 GH14684-PA 35..147 365..474 343 58.4 Plus
Dgri\GH13638-PA 726 GH13638-PA 108..278 289..461 201 32.2 Plus
Dgri\GH24423-PA 353 GH24423-PA 5..206 275..461 179 27.3 Plus
Dgri\GH11642-PA 833 GH11642-PA 372..605 383..588 164 29.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:31
Subject Length Description Subject Range Query Range Score Percent Strand
bru2-PA 632 CG31761-PA 1..632 1..632 3188 100 Plus
bru2-PM 664 CG43065-PM 1..607 1..607 3029 99.2 Plus
bru2-PG 664 CG43065-PG 1..607 1..607 3029 99.2 Plus
bru2-PL 893 CG43065-PL 1..600 1..600 3025 100 Plus
bru2-PK 737 CG43065-PK 1..600 1..600 3025 100 Plus
bru2-PD 737 CG31761-PD 1..600 1..600 3025 100 Plus
bru2-PE 893 CG31761-PE 1..600 1..600 3025 100 Plus
bru2-PF 347 CG43065-PF 1..336 1..336 1668 100 Plus
bru2-PJ 651 CG43065-PJ 139..358 381..600 1115 100 Plus
bru2-PH 651 CG43065-PH 139..358 381..600 1115 100 Plus
bru2-PI 350 CG43065-PI 1..213 388..600 1080 100 Plus
bru1-PK 573 CG31762-PK 49..425 232..579 802 49.4 Plus
bru1-PJ 573 CG31762-PJ 49..425 232..579 802 49.4 Plus
bru1-PI 573 CG31762-PI 49..425 232..579 802 49.4 Plus
bru1-PH 573 CG31762-PH 49..425 232..579 802 49.4 Plus
bru1-PE 604 CG31762-PE 80..456 232..579 802 49.4 Plus
bru1-PA 604 CG31762-PA 80..456 232..579 802 49.4 Plus
bru1-PF 620 CG31762-PF 80..456 232..579 802 49.4 Plus
bru1-PG 810 CG31762-PG 286..662 232..579 802 49.4 Plus
bru1-PB 810 CG31762-PB 286..662 232..579 802 49.4 Plus
bru1-PD 361 CG31762-PD 1..213 388..579 357 46.2 Plus
bru3-PD 382 CG43744-PD 21..233 365..570 357 42.9 Plus
bru3-PC 396 CG43744-PC 35..247 365..570 357 42.9 Plus
bru3-PO 403 CG43744-PO 16..228 365..570 357 42.9 Plus
bru3-PN 403 CG43744-PN 16..228 365..570 357 42.9 Plus
bru3-PE 408 CG43744-PE 21..233 365..570 357 42.9 Plus
bru3-PA 422 CG43744-PA 35..247 365..570 357 42.9 Plus
bru3-PG 390 CG43744-PG 21..241 365..570 351 42.7 Plus
bru3-PH 416 CG43744-PH 21..241 365..570 351 42.7 Plus
bru3-PI 384 CG43744-PI 19..235 369..570 341 42.6 Plus
Rbp9-PH 439 CG3151-PH 18..325 199..510 255 28 Plus
Rbp9-PG 439 CG3151-PG 18..325 199..510 255 28 Plus
Rbp9-PF 439 CG3151-PF 18..325 199..510 255 28 Plus
Rbp9-PE 439 CG3151-PE 18..325 199..510 255 28 Plus
Rbp9-PJ 684 CG3151-PJ 18..325 199..510 255 28 Plus
Rbp9-PK 444 CG3151-PK 18..330 199..510 254 27.9 Plus
Rbp9-PI 444 CG3151-PI 18..330 199..510 254 27.9 Plus
Rbp9-PB 444 CG3151-PB 18..330 199..510 254 27.9 Plus
Rbp9-PC 444 CG3151-PC 18..330 199..510 254 27.9 Plus
Sxl-PE 314 CG43770-PE 70..250 280..461 190 28.4 Plus
Sxl-PA 314 CG43770-PA 70..250 280..461 190 28.4 Plus
Sxl-PAB 322 CG43770-PAB 78..258 280..461 190 28.4 Plus
Sxl-PAC 331 CG43770-PAC 87..267 280..461 190 28.4 Plus
Sxl-PR 342 CG43770-PR 100..280 280..461 190 28.4 Plus
Sxl-PC 344 CG43770-PC 100..280 280..461 190 28.4 Plus
Sxl-PN 344 CG43770-PN 100..280 280..461 190 28.4 Plus
Sxl-PW 344 CG43770-PW 102..282 280..461 190 28.4 Plus
Sxl-PJ 346 CG43770-PJ 102..282 280..461 190 28.4 Plus
Sxl-PG 346 CG43770-PG 102..282 280..461 190 28.4 Plus
Sxl-PP 352 CG43770-PP 110..290 280..461 190 28.4 Plus
Sxl-PT 354 CG43770-PT 110..290 280..461 190 28.4 Plus
bru1-PF 620 CG31762-PF 231..526 288..549 165 26.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:26:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17946-PA 580 GI17946-PA 1..578 1..610 1022 50.7 Plus
Dmoj\GI17944-PA 851 GI17944-PA 383..611 287..517 857 66.7 Plus
Dmoj\bru-3-PA 611 GI13095-PA 35..147 365..474 342 58.4 Plus
Dmoj\GI11879-PA 724 GI11879-PA 119..310 289..478 214 30.6 Plus
Dmoj\GI16282-PA 353 GI16282-PA 5..206 275..461 179 27.3 Plus
Dmoj\GI17944-PA 851 GI17944-PA 392..625 383..588 155 28.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:26:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18624-PA 764 GL18624-PA 123..623 110..600 1535 67.6 Plus
Dper\GL18622-PA 398 GL18622-PA 29..150 381..495 415 68 Plus
Dper\GL21647-PA 458 GL21647-PA 35..121 365..448 264 59.8 Plus
Dper\GL26299-PA 678 GL26299-PA 105..304 289..494 226 30.9 Plus
Dper\GL22975-PA 385 GL22975-PA 5..206 275..461 176 27.3 Plus
Dper\GL18622-PA 398 GL18622-PA 25..118 290..383 162 36.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:26:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25725-PC 595 GA25725-PC 134..347 289..495 862 72 Plus
Dpse\GA25725-PB 818 GA25725-PB 357..570 289..495 861 72 Plus
Dpse\GA25731-PA 574 GA25731-PA 1..221 388..600 768 79 Plus
Dpse\GA25729-PA 140 GA25729-PA 8..102 270..364 454 86.3 Plus
Dpse\bru-3-PA 421 GA28624-PA 35..147 365..474 342 58.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:26:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26785-PA 644 GM26785-PA 1..644 1..632 2208 89.5 Plus
Dsec\GM26763-PA 816 GM26763-PA 343..557 287..495 860 71.2 Plus
Dsec\bru-3-PA 422 GM24582-PA 35..147 365..474 342 58.4 Plus
Dsec\GM18380-PA 650 GM18380-PA 311..486 289..461 204 31.8 Plus
Dsec\GM26763-PA 816 GM26763-PA 352..590 383..593 193 28.6 Plus
Dsec\Sxl-PA 301 GM17480-PA 100..282 278..461 193 28.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:26:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23833-PA 245 GD23833-PA 1..245 388..632 1245 96.7 Plus
Dsim\GD23828-PA 821 GD23828-PA 348..562 287..495 859 71.2 Plus
Dsim\GD23831-PA 166 GD23831-PA 22..142 265..385 657 96.7 Plus
Dsim\bru-3-PA 616 GD12651-PA 248..341 381..474 310 61.7 Plus
Dsim\GD23828-PA 821 GD23828-PA 357..595 383..593 192 28.6 Plus
Dsim\GD16475-PA 466 GD16475-PA 147..328 297..478 187 27.5 Plus
Dsim\GD23831-PA 166 GD23831-PA 45..134 375..463 161 36.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:26:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17718-PA 738 GJ17718-PA 1..597 1..599 1341 57.9 Plus
Dvir\GJ17715-PA 831 GJ17715-PA 363..591 287..517 860 67.1 Plus
Dvir\bru-3-PA 421 GJ13842-PA 35..147 365..474 343 58.4 Plus
Dvir\GJ13991-PA 725 GJ13991-PA 97..287 289..477 215 30.8 Plus
Dvir\Sxl-PA 368 GJ16698-PA 106..283 282..461 184 28.7 Plus
Dvir\GJ17715-PA 831 GJ17715-PA 372..605 383..588 154 28.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:26:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15495-PA 758 GK15495-PA 117..489 136..496 1194 67.6 Plus
Dwil\GK15493-PA 866 GK15493-PA 371..590 287..506 859 69 Plus
Dwil\GK17101-PA 645 GK17101-PA 69..181 365..474 342 58.4 Plus
Dwil\GK14865-PA 725 GK14865-PA 123..291 297..461 198 31.6 Plus
Dwil\GK25647-PA 353 GK25647-PA 5..206 275..461 179 27.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:26:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18585-PA 508 GE18585-PA 1..213 388..600 1087 98.1 Plus
Dyak\GE18583-PA 430 GE18583-PA 1..401 1..385 1057 80.6 Plus
Dyak\GE18580-PA 830 GE18580-PA 359..571 289..495 859 71.8 Plus
Dyak\bru-3-PA 422 GE20053-PA 35..147 365..474 342 58.4 Plus
Dyak\GE18193-PA 446 GE18193-PA 107..297 289..477 210 30.8 Plus
Dyak\GE18583-PA 430 GE18583-PA 304..395 375..465 169 35.9 Plus

LD19052.hyp Sequence

Translation from 498 to 2396

> LD19052.hyp
MMLQSLSLHADKLSGNSPAAAAATGAAAATSEATAVASAAAATTMLATAP
VAHVANGNNSNSSAGSSSNSNSSSNNHSLYSNNNLNTGNNSQQQQQQQQQ
HPQILPVKYEYLENLTSSGATSGAIAATTTFTGAAKSFHPYLRPTGSGSN
SNNSIAALSTTTAATAAKMSTTLFETLLHNQINSSPIALPAATAIAAISA
AATAATATPGTAATAAAAAAAAPSTQLNSSINSRTSLGDQGGAIVVVTPA
PPVAAPPTGGPNRNQSPTRDCSVKMELMESTSPDSIKDQPDADNIKMFVG
QIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAAL
RAQDALHNIKTLDGMHHPIQMKPADSENRNERKLFVGMLNKKYTEADVRQ
LFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEG
CSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATA
LIAAPPSAGRTNPSMAAALAAVPQVQQAGSAATAPTTLVPLNSTTALSAS
LTPNLLATNAAHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLP
DESKKSTKEKKKTSSSTVFPAFLCPFSDLQFL*

LD19052.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:33:41
Subject Length Description Subject Range Query Range Score Percent Strand
bru-2-PA 632 CG31761-PA 1..632 1..632 3188 100 Plus
bru-2-PM 664 CG43065-PM 1..607 1..607 3029 99.2 Plus
bru-2-PG 664 CG43065-PG 1..607 1..607 3029 99.2 Plus
bru-2-PL 893 CG43065-PL 1..600 1..600 3025 100 Plus
bru-2-PK 737 CG43065-PK 1..600 1..600 3025 100 Plus