BDGP Sequence Production Resources |
Search the DGRC for LD19061
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 190 |
Well: | 61 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG11178-RB |
Protein status: | LD19061.pep: gold |
Preliminary Size: | 2381 |
Sequenced Size: | 3021 |
Gene | Date | Evidence |
---|---|---|
CG11178 | 2001-01-01 | Release 2 assignment |
CG11178 | 2001-10-10 | Blastp of sequenced clone |
CG11178 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11178 | 2008-04-29 | Release 5.5 accounting |
CG11178 | 2008-08-15 | Release 5.9 accounting |
CG11178 | 2008-12-18 | 5.12 accounting |
3021 bp (3021 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061257
> LD19061.complete CAAACAAGAAAATAGAATAAAAACAAAATCGCTTGGAAATCGTAAAGAAA GAAAGTTAAATACGACAGATAGATAATTGCAACACAAAATAAGTGCGCCG TGGTCCGAATAGAACAACAATTGCGTGGCGTGGTTACACGAGTGCGAGCG AGAGGGCCGATGTGGTAGTGGCCAATCCAATTGGATATTCATTTTGCAGG CAAAAAACGCATTTTTTGTGGACACCGCTTGCTCCTTGGTACAAGGATAA CGACCAACGATGGCCAGCGAGCCGGAGAACAAGCCACCGATCCTGCACAT CCTCGTGGTGGGCTTCCACCACAAGCTGGGCTGCCAGGTGGAGTTCTCGC ATCCGCCGCTAATCTCGGGCTCCACGGGACGCAACGAATGCCCCTCCGGC TGGAAGTACCTGCCCACTCTGGCTCTGCCCGACGGCTCGCATAACTTTGC CGAGGACACGGTGTTCTTCAACCTGCCCAGTTTGTATGAGCCGGCTGAGA GTATCTACGGCGTGTCCTGCTATCGCCAGATACGCGTGGAGAAGCTAAAG ATCCGGACAGCGGACCTCACGCGCAGCACCGTTCAGAAGTCCGTTTGCAT ATTGGCCCGCCTGCCCATCTACGGGTACATCGAGGTGAAGCTAGCCCTCA TTGCCGATGCCTTTTTCGATCAGGGCGACTTCTCCGGCACGGAACTGCTG GCCAAGGCCTATCAGCAGCTAAATGCCTGCCTCCAGGACGACGAGTCGCG CCGCCCGTTGCGCCACTTTCACGTGGGGCTGTCGCTGCGCGAGATCGTAC TCCACTGGCGCCACAAGACGCTAATGCTCTTCAAACTAATGCTGCTGCAG CGACGAGTGGTGTGTTTCGGTTCGCCCGTACGCCAAATGTGTGTGCTGAT CCTGGGCATGGCATCGCTGGTGCCGCGGCTGCTGGAGAAGGGCTTCCAGG AGGTGGCCTGTGTGCGCACGTCGCGTCCCCTGTCGCCCATGCCGGATTTC ACTGACTCCCTGCAGCGGGAGGCGCAGGCCGAAGCCGAAGCGGAACTGGA GGCAGTGGCTTCCGTAGCAGCTGCCACCGATGAGCAGAAACTGACGCCCG AGAGCGCCACAGCGGTGGAGGGCGAGGCCGAAGAGCTGGCCCTCGTCTCA TCCGCAGCGTCGGCGGGCGAGGAGCAGGTCAGTGGCGATGACACGTCGAC GCGTTCCACGCCCAACTCACAGTCGCAGGACTCATCGAACGGCAGGAACA GCTCGCTGACCAGAGAGGCCAGCGTGGACACACTAGCGTCCAACCTCGCC GCCTTGTGCGCTGTCAATCCGGATGAGTATCGGGCACCGGTCAGCATCTT CGCCAGCGGCAACCTCTGCCTGCCGTATCTGTCGCTACCGTACATGGACC TGCTCAGCGATCCCATGGTGCTCTCCTATGTCATCGGCACCTCCAACGTG CTTTTCCAGCAGAAACGTCAGCTGGCTGACGTCCTGGTGGACATCGAGGC GGCCAATCTGGATGCCCACGATCCGGAGCTCAGGCGTCAGCTGGTGCTGA GCACCGAGGATCTGCGCTACATGGACTACATCATGAAGCATGTGCAATCG CCAAAGGAGGATGCCGAGGGCAGCGAGTACTGGATACGGGAGCAGTTTCA GGGCTATATTCTCGCACTCTTGCGAACTGCTGTGGCTCCAGATGCCACGC CAAAGGACAACGATCATTTCAATGCGCACTTCATGGGCGCCTTCAAGCGC ACCCAATGCTTTCAGGAATGGTACGACGTTAGGCCCGAACCCGAGTTCTT TGAGGCCCTGCCCGCTGGTCATCCCTTCGCCGGCACCTTGTCCGTGGCGG ACATGAAACTAAAACTAGCACAAACCATGCAAAATAGCGAGAGTGGGCGA AAAATCAACCAGGCGGTAAACACGACGAGTCGTGCAGTGGGCGGTGCCAT ATCCCAGGCCAAGGGCGCCTTCTCCAGCTGGTGGTCATCCATCACGACGG CCCCGCCCAATGCAACAAATGCAGGGCCTGCGACCAGCAGCTCGAATGGG CAGGAAGGGGATGTAAGCGAAGGAGCTGCAGCCCAAGAGATCTCAGTTAC ATTCCAGAATCATAAGGACGTCGAAGACCTTGACGTGGCGGGAGTCAGCA TCCACCTGGCTGGCCAGGAAGAGGCACACGAGTCGCACGAGTCACAGAGC GTCAGCTGCGACAAGCCGCAAGGCATCGTCGAGATTGGACGCGAGGCGGA GCTGTTGGACAAAACTGCGCAATCGGAGGAGCCCAAGATTGCGGCTGCAA GCCAAGCCGGTCGGCCAGGATGTGGCGGCGATGTGGCCACCTCGGCCGTG GAGCGCAGCAGTGGCGATGTCTTCATTGTCTGAGGACGTTAGCACTATCG GGGTCATTGTATAGAATTGAACTAAGCTAAATGATATTTATTTATTACAC AACATATTGTCTCAGTCTCAATGTTGAATTTATAACTACTACTCGAACTT CCCCCCTATTTTTTTGTATACCCATACATATTCTGTAGTTGGTTGACTTG TGGTACACAGAAACCTAGGATTTATGATCGAGCGACAATATACTATGAGA TACATCACTACTAATTGAAATAATACCTCATTTTCGTTTATTTTAAGCCC AAAAATGACAAAATATATATCTACGAATACGAAAAAAGCGCACACAAATG AAATATCCAAATTAATTAATTTAATAGCAATAAATGCAAACGTTTCCCTG CAACTTTTTTGTGGCACAAGTCAATCGCACGCTAAACTACACAAAATTGG CCAAATGATAATATTATTTAATATTTATAGATACCTACGCTTAAGTTACC CTTGCCGTATTTACCCACCACTCAGTGTATACATATGTATAACCATGTAA AGCTAAACCGTTCCAAGTGCAATTTGTAATCCCAAAAAAGGCAGCGGAGA TCCGTAATGAAATCCGTAATACGTGTGGCAATAAAGAACTTAAGAAATCT GAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 13496922..13498210 | 1..1289 | 6445 | 100 | Plus |
chrX | 22417052 | chrX | 13499137..13500265 | 1873..3001 | 5645 | 100 | Plus |
chrX | 22417052 | chrX | 13498419..13498820 | 1290..1691 | 2010 | 100 | Plus |
chrX | 22417052 | chrX | 13498885..13499068 | 1689..1872 | 920 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 13606186..13607474 | 1..1289 | 6445 | 100 | Plus |
X | 23542271 | X | 13608401..13609530 | 1873..3002 | 5650 | 100 | Plus |
X | 23542271 | X | 13607683..13608084 | 1290..1691 | 2010 | 100 | Plus |
X | 23542271 | X | 13608149..13608332 | 1689..1872 | 920 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 13614284..13615572 | 1..1289 | 6445 | 100 | Plus |
X | 23527363 | X | 13616499..13617628 | 1873..3002 | 5650 | 100 | Plus |
X | 23527363 | X | 13615781..13616182 | 1290..1691 | 2010 | 100 | Plus |
X | 23527363 | X | 13616247..13616430 | 1689..1872 | 920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13498888..13499068 | 1692..1872 | 100 | -> | Plus |
chrX | 13496922..13498210 | 1..1289 | 100 | -> | Plus |
chrX | 13498419..13498820 | 1290..1691 | 100 | -> | Plus |
chrX | 13499137..13500265 | 1873..3001 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11178-RB | 1..2124 | 260..2383 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11178-RB | 1..2124 | 260..2383 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11178-RB | 1..2124 | 260..2383 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11178-RB | 1..2124 | 260..2383 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11178-RB | 1..2124 | 260..2383 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11178-RB | 16..3016 | 1..3001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11178-RB | 16..3016 | 1..3001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11178-RB | 43..3043 | 1..3001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11178-RB | 16..3016 | 1..3001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11178-RB | 43..3043 | 1..3001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13608152..13608332 | 1692..1872 | 100 | -> | Plus |
X | 13607683..13608084 | 1290..1691 | 100 | -> | Plus |
X | 13606186..13607474 | 1..1289 | 100 | -> | Plus |
X | 13608401..13609529 | 1873..3001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13608152..13608332 | 1692..1872 | 100 | -> | Plus |
X | 13607683..13608084 | 1290..1691 | 100 | -> | Plus |
X | 13606186..13607474 | 1..1289 | 100 | -> | Plus |
X | 13608401..13609529 | 1873..3001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13608152..13608332 | 1692..1872 | 100 | -> | Plus |
X | 13607683..13608084 | 1290..1691 | 100 | -> | Plus |
X | 13606186..13607474 | 1..1289 | 100 | -> | Plus |
X | 13608401..13609529 | 1873..3001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13501716..13502117 | 1290..1691 | 100 | -> | Plus |
arm_X | 13502185..13502365 | 1692..1872 | 100 | -> | Plus |
arm_X | 13500219..13501507 | 1..1289 | 100 | -> | Plus |
arm_X | 13502434..13503562 | 1873..3001 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13616250..13616430 | 1692..1872 | 100 | -> | Plus |
X | 13614284..13615572 | 1..1289 | 100 | -> | Plus |
X | 13615781..13616182 | 1290..1691 | 100 | -> | Plus |
X | 13616499..13617627 | 1873..3001 | 100 | Plus |
Translation from 259 to 2382
> LD19061.pep MASEPENKPPILHILVVGFHHKLGCQVEFSHPPLISGSTGRNECPSGWKY LPTLALPDGSHNFAEDTVFFNLPSLYEPAESIYGVSCYRQIRVEKLKIRT ADLTRSTVQKSVCILARLPIYGYIEVKLALIADAFFDQGDFSGTELLAKA YQQLNACLQDDESRRPLRHFHVGLSLREIVLHWRHKTLMLFKLMLLQRRV VCFGSPVRQMCVLILGMASLVPRLLEKGFQEVACVRTSRPLSPMPDFTDS LQREAQAEAEAELEAVASVAAATDEQKLTPESATAVEGEAEELALVSSAA SAGEEQVSGDDTSTRSTPNSQSQDSSNGRNSSLTREASVDTLASNLAALC AVNPDEYRAPVSIFASGNLCLPYLSLPYMDLLSDPMVLSYVIGTSNVLFQ QKRQLADVLVDIEAANLDAHDPELRRQLVLSTEDLRYMDYIMKHVQSPKE DAEGSEYWIREQFQGYILALLRTAVAPDATPKDNDHFNAHFMGAFKRTQC FQEWYDVRPEPEFFEALPAGHPFAGTLSVADMKLKLAQTMQNSESGRKIN QAVNTTSRAVGGAISQAKGAFSSWWSSITTAPPNATNAGPATSSSNGQEG DVSEGAAAQEISVTFQNHKDVEDLDVAGVSIHLAGQEEAHESHESQSVSC DKPQGIVEIGREAELLDKTAQSEEPKIAAASQAGRPGCGGDVATSAVERS SGDVFIV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22578-PA | 700 | GF22578-PA | 1..700 | 1..707 | 3138 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17795-PA | 705 | GG17795-PA | 1..705 | 1..707 | 3663 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12502-PA | 750 | GH12502-PA | 1..750 | 1..707 | 2864 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11178-PC | 707 | CG11178-PC | 1..707 | 1..707 | 3624 | 100 | Plus |
CG11178-PB | 707 | CG11178-PB | 1..707 | 1..707 | 3624 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14855-PA | 739 | GI14855-PA | 1..739 | 1..707 | 2823 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20243-PA | 726 | GL20243-PA | 5..726 | 2..707 | 3049 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10819-PA | 728 | GA10819-PA | 5..728 | 2..707 | 3047 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17619-PA | 313 | GM17619-PA | 1..311 | 1..343 | 1568 | 88.6 | Plus |
Dsec\GM17620-PA | 160 | GM17620-PA | 1..160 | 540..707 | 798 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24811-PA | 699 | GD24811-PA | 1..699 | 1..707 | 3671 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19515-PA | 741 | GJ19515-PA | 1..741 | 1..707 | 2868 | 77.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19887-PA | 712 | GK19887-PA | 1..712 | 1..707 | 2713 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17091-PA | 707 | GE17091-PA | 1..707 | 1..707 | 3645 | 96.6 | Plus |
Translation from 259 to 2382
> LD19061.hyp MASEPENKPPILHILVVGFHHKLGCQVEFSHPPLISGSTGRNECPSGWKY LPTLALPDGSHNFAEDTVFFNLPSLYEPAESIYGVSCYRQIRVEKLKIRT ADLTRSTVQKSVCILARLPIYGYIEVKLALIADAFFDQGDFSGTELLAKA YQQLNACLQDDESRRPLRHFHVGLSLREIVLHWRHKTLMLFKLMLLQRRV VCFGSPVRQMCVLILGMASLVPRLLEKGFQEVACVRTSRPLSPMPDFTDS LQREAQAEAEAELEAVASVAAATDEQKLTPESATAVEGEAEELALVSSAA SAGEEQVSGDDTSTRSTPNSQSQDSSNGRNSSLTREASVDTLASNLAALC AVNPDEYRAPVSIFASGNLCLPYLSLPYMDLLSDPMVLSYVIGTSNVLFQ QKRQLADVLVDIEAANLDAHDPELRRQLVLSTEDLRYMDYIMKHVQSPKE DAEGSEYWIREQFQGYILALLRTAVAPDATPKDNDHFNAHFMGAFKRTQC FQEWYDVRPEPEFFEALPAGHPFAGTLSVADMKLKLAQTMQNSESGRKIN QAVNTTSRAVGGAISQAKGAFSSWWSSITTAPPNATNAGPATSSSNGQEG DVSEGAAAQEISVTFQNHKDVEDLDVAGVSIHLAGQEEAHESHESQSVSC DKPQGIVEIGREAELLDKTAQSEEPKIAAASQAGRPGCGGDVATSAVERS SGDVFIV*