BDGP Sequence Production Resources |
Search the DGRC for LD19162
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 191 |
Well: | 62 |
Vector: | pBS SK- |
Associated Gene/Transcript | Ent1-RA |
Protein status: | LD19162.pep: gold |
Preliminary Size: | 2093 |
Sequenced Size: | 1985 |
Gene | Date | Evidence |
---|---|---|
CG11907 | 2001-01-01 | Release 2 assignment |
CG11907 | 2001-10-10 | Blastp of sequenced clone |
CG11907 | 2003-01-01 | Sim4 clustering to Release 3 |
Ent1 | 2008-04-29 | Release 5.5 accounting |
Ent1 | 2008-08-15 | Release 5.9 accounting |
Ent1 | 2008-12-18 | 5.12 accounting |
1985 bp (1985 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061261
> LD19162.complete CAAATTCGTTTTTATGTTACGCAGTTCGTCCGTGCTAAATGATACACATG AAAGTAAATTGCATCAGATTAAGTTACATCGAATACTTCTCCACAATTAC AGATGTGAATAATCCGCCAGAGGTGTTGTAAATTTATGAATACCAAGGGC TGCGTACAAAACAGTAGTGCAATTCAGTGGCAATGCCAGGCACCAGTGAC ACACGACGACTGGTGGACGCCCTGGACGAGGATGACGAGATTCTGGGCAC GGAGGGCAGCTTCGTTCCCGCTTTTCGTCCGCAGGACCACCATGCGGATG AGCAATGTCTCATGGAACGCCAGCAGGACGAGGTAGTTTTGGTGTCCAAC GAACCCGAGAGTGGACGACTCTTCACCTACCTCGTGTTCTACCTGTTGGG CATTGGTACCATGACCCCGTGGAATTTCTTTGTGACTGCGGAAGATTACT GGAAGTACAAGTTCCGGAATGCATCGATTAATAACACAGACCTGGAGGAA GAGCTCACCCCGTTGCAGAAGAGTTTTACCTGCGACTTGGCTCTCACGGC CACTATTTCTGGGACTACATTTCTGCTGCTAAACGCCATTTTCGGACACC ATGTGTCCCTGCGCACCAAGATGTTAGGAACGCTGTGGATGATCCTCATC CTTTTCGGGGTTACAACTGGCTTCGTGGAGATCAACACAGACACGTGGCA GGAACAGTTTTTCCTAATCACTCTCATCATTGTAGTGCTGCTAAATATAT CTGCGGCTACAATGTCGGGAGCCCTCTACGGAGTCGCTGGTCTATTTCCC TCCGAGTTTATCACCGCTGTGGTTAGCGGACAGGCTCTTGGTGGTATCCT CACAGCCCTGGCCTTCATTCTTGTGCTTGCATTCGACACGGGTCCCAATA CCACTGCATTCATCTTCTTCATTGTGGGAGGAGTGCTCATCCTGCTTTGC ATTGTGTGCTACGTAATCCTGGCTCGAAAGCCTTTCTTTAGGTATTATCT CGAAGGTGGCGACAAGTACAAGGTCATCCGGGCAGTGCCCTCGCACAACC GGAATGGAAGCGCTGAGGGCTTGCCGCTTGAGCCTATTTTGCGTCAGGTC ATGTCGAAGATCTATCTGCATGCCATTTCCCTAGCGCTCCTCTATACCAC GACCCTGTCTGTCTATCCGGCAGTTACAGTGCTTATGCAGTCAGAGTACG GCCACAGCGTGTGGACAGATGTTTATTTTCTGCCCGTCGTGAACTACCTG ATATTTAACTGCGGTGACTATTTTGGTCGTCTGTTTGCTGGCTGGATGGA GCGACCATTAAACCAGAACACTTCGCTACTATTTATTGTAGTGCGCATGG CGTTTGTTCCGTTATTTCTATGTTCAAACTCCAGCGAACACAGCTTTCTG CCAGTTTTGGTAAAACACGACTATACTTTCATAGCGATGATGGTAATGTT TGCCTTGTCCAACGGATATTTTACGAACATACTACTTATAATGGCGCCTA AACGCGTAAAGCAGCATGAAAAGGAGCTGGCTTCGTCGATAATGGCAGCT GCTTTGAGCTGTGGCATGGCTGTGGGATCACTGCTCAGCCTTGTATTTGT TCAAATGCTTTGAATTAGCCAACAAAATAAGTCTGCCCATAGTGCCTTCG GGAGTTTCAGAATCTTAAGCATTATAGTGATAGTTAACTTGATATTGGTT GCTCTTCCAACTACTTAGGGGGTGTTAATGTTTTTACTTTTGTTACAAGT CTACTGACTGAAATTATTTACACAGCGAAATTTTATTTAAATTTTTTCCA AAACGAAGTGTTATTTAATATTTTGAGTTATTTTGATGCTGTGTGTTGTT TTCCAAATTTTACTCATTTTTTATTTTAACAAGTTTACTATATCGGGATG CCTAGATTTAAGGTTTAAAGTTTTCATTATATACTAGGAATAAGACGATA TTAAAAAAATTAGAACAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ent1.b | 2274 | Ent1.b | 303..2270 | 1..1968 | 9840 | 100 | Plus |
Ent1-RA | 2107 | Ent1-RA | 136..2103 | 1..1968 | 9840 | 100 | Plus |
Ent1-RB | 1958 | Ent1-RB | 89..1954 | 103..1968 | 9330 | 100 | Plus |
Ent1-RB | 1958 | Ent1-RB | 36..88 | 1..53 | 265 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 355584..356335 | 1966..1215 | 3760 | 100 | Minus |
chr2L | 23010047 | chr2L | 356386..356856 | 1218..748 | 2355 | 100 | Minus |
chr2L | 23010047 | chr2L | 357442..357887 | 446..1 | 2230 | 100 | Minus |
chr2L | 23010047 | chr2L | 356910..357210 | 747..447 | 1505 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 355563..356316 | 1968..1215 | 3770 | 100 | Minus |
2L | 23513712 | 2L | 356367..356837 | 1218..748 | 2355 | 100 | Minus |
2L | 23513712 | 2L | 357423..357868 | 446..1 | 2230 | 100 | Minus |
2L | 23513712 | 2L | 356891..357191 | 747..447 | 1505 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 355563..356316 | 1968..1215 | 3770 | 100 | Minus |
2L | 23513712 | 2L | 356367..356837 | 1218..748 | 2355 | 100 | Minus |
2L | 23513712 | 2L | 357423..357868 | 446..1 | 2230 | 100 | Minus |
2L | 23513712 | 2L | 356891..357191 | 747..447 | 1505 | 100 | Minus |
3L | 28103327 | 3L | 20026930..20026976 | 1838..1792 | 220 | 97.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ddip\Bari1 | 1677 | Ddip\Bari1 DDBARI1 1676bp Derived from Y13852. | 1357..1436 | 1837..1761 | 132 | 65 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 355584..356331 | 1219..1966 | 100 | <- | Minus |
chr2L | 356386..356856 | 748..1218 | 100 | <- | Minus |
chr2L | 356910..357210 | 447..747 | 100 | <- | Minus |
chr2L | 357442..357887 | 1..446 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ent1-RB | 1..1431 | 183..1613 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ent1-RB | 1..1431 | 183..1613 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ent1-RA | 1..1431 | 183..1613 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ent1-RB | 1..1431 | 183..1613 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ent1-RA | 1..1431 | 183..1613 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ent1-RA | 1..1966 | 1..1966 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ent1-RA | 1..1966 | 1..1966 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ent1-RA | 7..1972 | 1..1966 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ent1-RA | 1..1966 | 1..1966 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ent1-RA | 7..1972 | 1..1966 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 355565..356312 | 1219..1966 | 100 | <- | Minus |
2L | 356367..356837 | 748..1218 | 100 | <- | Minus |
2L | 356891..357191 | 447..747 | 100 | <- | Minus |
2L | 357423..357868 | 1..446 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 355565..356312 | 1219..1966 | 100 | <- | Minus |
2L | 356367..356837 | 748..1218 | 100 | <- | Minus |
2L | 356891..357191 | 447..747 | 100 | <- | Minus |
2L | 357423..357868 | 1..446 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 355565..356312 | 1219..1966 | 100 | <- | Minus |
2L | 356367..356837 | 748..1218 | 100 | <- | Minus |
2L | 356891..357191 | 447..747 | 100 | <- | Minus |
2L | 357423..357868 | 1..446 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 355565..356312 | 1219..1966 | 100 | <- | Minus |
arm_2L | 356367..356837 | 748..1218 | 100 | <- | Minus |
arm_2L | 356891..357191 | 447..747 | 100 | <- | Minus |
arm_2L | 357423..357868 | 1..446 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 355565..356312 | 1219..1966 | 100 | <- | Minus |
2L | 356367..356837 | 748..1218 | 100 | <- | Minus |
2L | 356891..357191 | 447..747 | 100 | <- | Minus |
2L | 357423..357868 | 1..446 | 100 | Minus |
Translation from 182 to 1612
> LD19162.pep MPGTSDTRRLVDALDEDDEILGTEGSFVPAFRPQDHHADEQCLMERQQDE VVLVSNEPESGRLFTYLVFYLLGIGTMTPWNFFVTAEDYWKYKFRNASIN NTDLEEELTPLQKSFTCDLALTATISGTTFLLLNAIFGHHVSLRTKMLGT LWMILILFGVTTGFVEINTDTWQEQFFLITLIIVVLLNISAATMSGALYG VAGLFPSEFITAVVSGQALGGILTALAFILVLAFDTGPNTTAFIFFIVGG VLILLCIVCYVILARKPFFRYYLEGGDKYKVIRAVPSHNRNGSAEGLPLE PILRQVMSKIYLHAISLALLYTTTLSVYPAVTVLMQSEYGHSVWTDVYFL PVVNYLIFNCGDYFGRLFAGWMERPLNQNTSLLFIVVRMAFVPLFLCSNS SEHSFLPVLVKHDYTFIAMMVMFALSNGYFTNILLIMAPKRVKQHEKELA SSIMAAALSCGMAVGSLLSLVFVQML*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24827-PA | 481 | GF24827-PA | 1..481 | 1..476 | 2181 | 85 | Plus |
Dana\GF14172-PA | 455 | GF14172-PA | 50..447 | 58..469 | 364 | 26.2 | Plus |
Dana\GF23579-PA | 673 | GF23579-PA | 45..272 | 55..292 | 173 | 22.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24654-PA | 476 | GG24654-PA | 1..476 | 1..476 | 2392 | 93.7 | Plus |
Dere\GG10421-PA | 457 | GG10421-PA | 51..450 | 58..469 | 336 | 25.8 | Plus |
Dere\GG15604-PA | 668 | GG15604-PA | 45..272 | 55..292 | 171 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11145-PA | 492 | GH11145-PA | 30..492 | 24..476 | 1788 | 72.8 | Plus |
Dgri\GH13844-PA | 458 | GH13844-PA | 6..449 | 15..469 | 312 | 24 | Plus |
Dgri\GH17074-PA | 660 | GH17074-PA | 362..523 | 305..476 | 170 | 29.1 | Plus |
Dgri\GH17074-PA | 660 | GH17074-PA | 38..245 | 55..278 | 158 | 21.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ent1-PC | 476 | CG11907-PC | 1..476 | 1..476 | 2447 | 100 | Plus |
Ent1-PB | 476 | CG11907-PB | 1..476 | 1..476 | 2447 | 100 | Plus |
Ent1-PA | 476 | CG11907-PA | 1..476 | 1..476 | 2447 | 100 | Plus |
Ent2-PA | 458 | CG31911-PA | 51..450 | 58..469 | 372 | 25.2 | Plus |
Ent2-PB | 458 | CG31911-PB | 51..450 | 58..469 | 372 | 25.2 | Plus |
Ent3-PB | 667 | CG11010-PB | 48..271 | 58..292 | 189 | 23.8 | Plus |
Ent3-PC | 668 | CG11010-PC | 48..272 | 58..292 | 188 | 23.7 | Plus |
Ent3-PA | 668 | CG11010-PA | 48..272 | 58..292 | 188 | 23.7 | Plus |
Ent3-PB | 667 | CG11010-PB | 367..528 | 305..476 | 177 | 29.7 | Plus |
Ent3-PC | 668 | CG11010-PC | 368..529 | 305..476 | 177 | 29.7 | Plus |
Ent3-PA | 668 | CG11010-PA | 368..529 | 305..476 | 177 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17852-PA | 464 | GI17852-PA | 11..464 | 27..476 | 1802 | 75.6 | Plus |
Dmoj\GI20368-PA | 454 | GI20368-PA | 6..454 | 22..475 | 240 | 22.9 | Plus |
Dmoj\GI11668-PA | 657 | GI11668-PA | 362..523 | 305..476 | 165 | 28.4 | Plus |
Dmoj\GI11668-PA | 657 | GI11668-PA | 38..245 | 55..278 | 155 | 21.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19271-PA | 482 | GL19271-PA | 1..482 | 1..476 | 2076 | 79.7 | Plus |
Dper\GL25678-PA | 455 | GL25678-PA | 49..448 | 58..469 | 306 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11273-PA | 482 | GA11273-PA | 1..482 | 1..476 | 2083 | 79.9 | Plus |
Dpse\GA16558-PA | 455 | GA16558-PA | 49..448 | 58..469 | 305 | 24.3 | Plus |
Dpse\GA10708-PA | 678 | GA10708-PA | 11..268 | 12..292 | 175 | 23.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16673-PA | 476 | GM16673-PA | 1..476 | 1..476 | 2471 | 97.7 | Plus |
Dsec\GM16179-PA | 458 | GM16179-PA | 51..450 | 58..469 | 336 | 26.3 | Plus |
Dsec\GM25377-PA | 668 | GM25377-PA | 48..272 | 58..292 | 171 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22962-PA | 476 | GD22962-PA | 1..476 | 1..476 | 2472 | 97.7 | Plus |
Dsim\GD23420-PA | 458 | GD23420-PA | 51..450 | 58..469 | 340 | 26.7 | Plus |
Dsim\GD14411-PA | 668 | GD14411-PA | 48..272 | 58..292 | 171 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17347-PA | 488 | GJ17347-PA | 27..488 | 20..476 | 1831 | 74.7 | Plus |
Dvir\GJ13720-PA | 456 | GJ13720-PA | 6..447 | 22..469 | 270 | 23 | Plus |
Dvir\GJ11346-PA | 657 | GJ11346-PA | 362..523 | 305..476 | 168 | 28.5 | Plus |
Dvir\GJ11346-PA | 657 | GJ11346-PA | 38..245 | 55..278 | 154 | 21.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23885-PA | 482 | GK23885-PA | 1..482 | 1..476 | 1891 | 73.9 | Plus |
Dwil\GK15325-PA | 453 | GK15325-PA | 41..446 | 52..469 | 281 | 24.5 | Plus |
Dwil\GK16831-PA | 752 | GK16831-PA | 101..308 | 55..278 | 165 | 21.9 | Plus |
Dwil\GK16831-PA | 752 | GK16831-PA | 430..591 | 305..476 | 165 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16173-PA | 476 | GE16173-PA | 1..476 | 1..476 | 2409 | 95 | Plus |
Dyak\GE13988-PA | 458 | GE13988-PA | 51..450 | 58..469 | 335 | 26.2 | Plus |
Dyak\GE21931-PA | 668 | GE21931-PA | 45..272 | 55..292 | 171 | 23 | Plus |
Translation from 182 to 1612
> LD19162.hyp MPGTSDTRRLVDALDEDDEILGTEGSFVPAFRPQDHHADEQCLMERQQDE VVLVSNEPESGRLFTYLVFYLLGIGTMTPWNFFVTAEDYWKYKFRNASIN NTDLEEELTPLQKSFTCDLALTATISGTTFLLLNAIFGHHVSLRTKMLGT LWMILILFGVTTGFVEINTDTWQEQFFLITLIIVVLLNISAATMSGALYG VAGLFPSEFITAVVSGQALGGILTALAFILVLAFDTGPNTTAFIFFIVGG VLILLCIVCYVILARKPFFRYYLEGGDKYKVIRAVPSHNRNGSAEGLPLE PILRQVMSKIYLHAISLALLYTTTLSVYPAVTVLMQSEYGHSVWTDVYFL PVVNYLIFNCGDYFGRLFAGWMERPLNQNTSLLFIVVRMAFVPLFLCSNS SEHSFLPVLVKHDYTFIAMMVMFALSNGYFTNILLIMAPKRVKQHEKELA SSIMAAALSCGMAVGSLLSLVFVQML*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ent1-PC | 476 | CG11907-PC | 1..476 | 1..476 | 2447 | 100 | Plus |
Ent1-PB | 476 | CG11907-PB | 1..476 | 1..476 | 2447 | 100 | Plus |
Ent1-PA | 476 | CG11907-PA | 1..476 | 1..476 | 2447 | 100 | Plus |
Ent2-PA | 458 | CG31911-PA | 51..450 | 58..469 | 372 | 25.2 | Plus |
Ent2-PB | 458 | CG31911-PB | 51..450 | 58..469 | 372 | 25.2 | Plus |