BDGP Sequence Production Resources |
Search the DGRC for LD19190
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 191 |
Well: | 90 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG11436-RA |
Protein status: | LD19190.pep: gold |
Preliminary Size: | 2067 |
Sequenced Size: | 1987 |
Gene | Date | Evidence |
---|---|---|
CG11436 | 2001-01-01 | Release 2 assignment |
CG11436 | 2001-10-10 | Blastp of sequenced clone |
CG11436 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11436 | 2008-04-29 | Release 5.5 accounting |
CG11436 | 2008-08-15 | Release 5.9 accounting |
CG11436 | 2008-12-18 | 5.12 accounting |
1987 bp (1987 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061262
> LD19190.complete ATTACCGGATCCTTGTCGTCCTCCTGGTTTTGCAATCCTACAAGATGCGC CTGTGCCCGCTGGCGTTCGCCGTGCTGCTTGGCCTTTTTCACCTGATCCA GGCCTGCAATCATTGGGTTCTTCGCGAGGAGCAGATCGTGCCCAAACTGG ACTCTCCATTCCACATGCGTGAACCCCACAATCTGGCGGCATTTCTCAAG CAGATCAGGTACAGTGAGTATGTGGAGCGCTCCTATCTGGATCTGCTGCG CAAGCGGGAACAGATTGTGGAGCACCTACGATTTTCGATGCGTTTCGGTG AGGATCTGGCCGAGCAGGCCAAGTGCGCCATGGACTACTACATGCTGGAG AAGCGAATGTCTTACCTGAAAATTACGCCAGAGCAGTTGAAAAGGATTAA TCTTCCGGACCAGAGGCAATTGCACATACAGAAGAGCGCATCCTCGATGG GAATGGAGCCGATATGCAGCGATTACCATCGATTAAGCGTGGGTCCAGCC ACCTATGATCATCTGGAGAGTTTTCGGCCCGAGGTCCTGGCCGCTGCCTT TCTGGAGCGCGAGCATGACACCAATGTGGGCATGGCCACCGTGGAATTGA CCCGGCGATTTGCGGTGGACGGATTGCAGCATCATCCGGCCTCCTGGAAG TTCCACACCCTAAGCTCGTACTATTGGCGCATGCGAGGAAATGCCCGGGA AGCCCTGCCCTGTGCCAGATTGGCTGCCTTGCTGGCTCCGCCGATCTTTA AGGATATACCCCTGCTGAGTCTGGGTACCATACTCTTTCGAATGGGTCGA CTGGCCGATGCCGATCTGATATTGACCGCTGCGGTGGAACATGCTCCTAA TGTGGCCGAGAATCATGTGGTCCTGGCCTCTGCACTGGCCATGAAACACG ACTTTAATCGATCACTGCAGCACTTCGACGAAGCCGAGCGACTGGATCCC AGCACATTGCCGAGAACACAGCAGGTGCGAAACTTTATAAGTTGCCTAGA GAACCTAACGAAGAAAACCTCCAAGATGTATAGCTATGTGAAGTACATGC AGAACGAGGTGAAGGAGTTCAAGAAGCTGAAGCATCACATCTCTCAGAAT CACGAGAGATTGATCCAACAGCAGCTGCCATTGGGAGCGAGACGTCTGCT TGGCCTGGACGCCAAAACCAACAACGATGATCTCCATCGAAGGGGTCAAT ACTGCAGCACGAGGACGCCGAATGGTTCAGATGAACCGGTGTTGTTTTGT GACTTCTATTCGGACATGCAAATGCGATTGGAGAGCAAGGATGTGGACAT TGATGTGCTGGAACGGGATCTAAAGGCCAATACGGATGCGGTCATTCGCC AGGTGTCCACCGAAATCCGGAAACAGTTCAATTTGGAGCAGCTTAAGGCG GCCAAGGCCCAAATGCCTGCGAAGGCGACAAAGGCTACATAGTAATGATT GCCATTACAAACAGATGGACTGGCACATTCCCTTCACAAAGCAACCAAAT ATTTTTGGTCACAAAATAGCTTGTACGATTAATCTGTTCTTAATTAGTAT TTAGGTATGTGTGCAAGAGACGTGTGCGAGTGTGTGTGTGTGTGTGTATA GGATAAGTTTTCAGGTATAGTTTTATCAGGCTTTATACACGGAAATGTTC GAAAGGAGGAGGTTCTTTCGATGCATAATACAGCATCGTTATGTCACTTT AATTAATAATATCTTTTAATGAATATTTAAACAACGACTTTTTCACATTC GATAAGAAATAAGCTTTGAATTGTATTCAACTAAGAACTCTTTTGTTTAT TTCTGTTTTCAGACAGCTTATTTTTATATTTGTTATATTATGTTTTATAT TTGTCCAAAACCTCCTACCTCGAATTTCCCAAAAAAATATCATTAAGATC GCGTATTTATATTTACCACTAGTTTTACATTCAGTTATGTTATCTTAATG CAAAAAAAAAAGGAAATCTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 4442779..4444750 | 1969..1 | 9640 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 4549876..4551851 | 1976..1 | 9865 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 4557974..4559949 | 1976..1 | 9865 | 99.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 4442779..4444750 | 1..1969 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11436-RA | 1..1398 | 45..1442 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11436-RA | 1..1398 | 45..1442 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11436-RA | 1..1398 | 45..1442 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11436-RA | 1..1398 | 45..1442 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11436-RA | 1..1398 | 45..1442 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11436-RA | 30..1996 | 1..1967 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11436-RA | 30..1998 | 1..1969 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11436-RA | 28..1996 | 1..1969 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11436-RA | 30..1996 | 1..1967 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11436-RA | 28..1996 | 1..1969 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4549883..4551851 | 1..1969 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4549883..4551851 | 1..1969 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4549883..4551851 | 1..1969 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 4443916..4445884 | 1..1969 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4557981..4559949 | 1..1969 | 100 | Minus |
Translation from 2 to 1441
> LD19190.hyp YRILVVLLVLQSYKMRLCPLAFAVLLGLFHLIQACNHWVLREEQIVPKLD SPFHMREPHNLAAFLKQIRYSEYVERSYLDLLRKREQIVEHLRFSMRFGE DLAEQAKCAMDYYMLEKRMSYLKITPEQLKRINLPDQRQLHIQKSASSMG MEPICSDYHRLSVGPATYDHLESFRPEVLAAAFLEREHDTNVGMATVELT RRFAVDGLQHHPASWKFHTLSSYYWRMRGNAREALPCARLAALLAPPIFK DIPLLSLGTILFRMGRLADADLILTAAVEHAPNVAENHVVLASALAMKHD FNRSLQHFDEAERLDPSTLPRTQQVRNFISCLENLTKKTSKMYSYVKYMQ NEVKEFKKLKHHISQNHERLIQQQLPLGARRLLGLDAKTNNDDLHRRGQY CSTRTPNGSDEPVLFCDFYSDMQMRLESKDVDIDVLERDLKANTDAVIRQ VSTEIRKQFNLEQLKAAKAQMPAKATKAT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11436-PA | 465 | CG11436-PA | 1..465 | 15..479 | 2414 | 100 | Plus |
Translation from 44 to 1441
> LD19190.pep MRLCPLAFAVLLGLFHLIQACNHWVLREEQIVPKLDSPFHMREPHNLAAF LKQIRYSEYVERSYLDLLRKREQIVEHLRFSMRFGEDLAEQAKCAMDYYM LEKRMSYLKITPEQLKRINLPDQRQLHIQKSASSMGMEPICSDYHRLSVG PATYDHLESFRPEVLAAAFLEREHDTNVGMATVELTRRFAVDGLQHHPAS WKFHTLSSYYWRMRGNAREALPCARLAALLAPPIFKDIPLLSLGTILFRM GRLADADLILTAAVEHAPNVAENHVVLASALAMKHDFNRSLQHFDEAERL DPSTLPRTQQVRNFISCLENLTKKTSKMYSYVKYMQNEVKEFKKLKHHIS QNHERLIQQQLPLGARRLLGLDAKTNNDDLHRRGQYCSTRTPNGSDEPVL FCDFYSDMQMRLESKDVDIDVLERDLKANTDAVIRQVSTEIRKQFNLEQL KAAKAQMPAKATKAT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19531-PA | 462 | GF19531-PA | 1..462 | 1..465 | 2260 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18535-PA | 465 | GG18535-PA | 1..465 | 1..465 | 2472 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17813-PA | 463 | GH17813-PA | 1..463 | 1..465 | 2057 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11436-PA | 465 | CG11436-PA | 1..465 | 1..465 | 2414 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16423-PA | 467 | GI16423-PA | 1..467 | 1..465 | 2029 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20274-PA | 469 | GL20274-PA | 1..469 | 1..465 | 2186 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11003-PA | 469 | GA11003-PA | 1..469 | 1..465 | 2186 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12685-PA | 463 | GM12685-PA | 3..463 | 5..465 | 2465 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16292-PA | 391 | GD16292-PA | 20..391 | 95..465 | 1852 | 94.4 | Plus |
Dsim\GD16292-PA | 391 | GD16292-PA | 1..42 | 1..42 | 235 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15826-PA | 467 | GJ15826-PA | 1..467 | 1..465 | 2042 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25005-PA | 463 | GK25005-PA | 1..463 | 1..465 | 2102 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16851-PA | 463 | GE16851-PA | 1..463 | 1..465 | 2435 | 97.2 | Plus |