BDGP Sequence Production Resources |
Search the DGRC for LD19518
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 195 |
Well: | 18 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG10038-RA |
Protein status: | LD19518.pep: gold |
Preliminary Size: | 1303 |
Sequenced Size: | 1195 |
Gene | Date | Evidence |
---|---|---|
CG10038 | 2001-01-01 | Release 2 assignment |
CG10038 | 2001-10-10 | Blastp of sequenced clone |
CG10038 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10038 | 2008-04-29 | Release 5.5 accounting |
CG10038 | 2008-08-15 | Release 5.9 accounting |
CG10038 | 2008-12-18 | 5.12 accounting |
1195 bp (1195 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061267
> LD19518.complete TCAAAACAAAAACTCGAACAACAATTCTATATAAATAAAAGCTTTTTCCA ATCGCTCTATTACTACGTAAGTGCCGAACCGTGTGGAAGCCACGCGACCG ATTGTAATGTGGTCTAGGCTTATTCAAATATTTCGACCCCTCAGAAGTTT TCGAATGTCGCACTCACCGCCGCCGGCTAGCAATTGCGAGGAGGCTCTCA TCCAGCTGAAAAACTTTGGATATGCATTCGATGGAGAAGGAGTGCTGCGC AAAGTCGATCCCGCCACTGGGGAGCCTGGCAAGGAACTCTTTTCCTACAA CGTCAGCGACGACGCCGCCGAAAACGAGAAGCACTACCAGAAGCTAGCCA ACCAAATCCCAGAAATTGTCTACGCTTTGCTGGAGAAAAACGGTCTTAGT CGCACCTACATCCCTTTTGACCAGCCTCCAGAGCGGTCTTCGTTTGTATT CTCGCAACCGGCAAAGCTGTCGCAGTCCAAAAAGTTGCTAGTCCTCATCC ATGGCAGTGGATACGTTAAAGCCGGACAGTGGGCCAGAAGTTTAATTATT AACAATTCCTTGGACCACGGTACCCAGCTGCCTTATGTGCGACAGGCCCA AAAACTGGGATACGATCTCCTCATCACCAATGCCAACGATTGCACACGAT TCTACAATGGTAAGGAGAATCCCATCAAGGGCGTCAATACGTCCGTAGAG CACGTTAAATATGTGTGGAAGAATATTGTATTGCCCGCGAAACCCGAGAG TGTGGCCATTGTGGCCCACAGTTATGGTGGCAGTCTTACTCTTGATTTGG TGGAGCGGTTTCCGGATTTCTTTAAAGAATCCGTTTTTGCCATTGCCTTC ACTGATGCCGCCATGGGAAGTCCCCAAGCGAAGAACAAGGAGTACCTGTG CGATGTGGCCTGCGATTGGGTTGCCAGCAACACACCCTTAGACACACCCG TTTCACAGTCAAAGAGCAGCATCCGGAGGATTTCCGCTGGCCACACTAAG CACGAATGGACCTCTTACTCGGCCATCGATTCCGTGTTCAAGTTCATTGA GGAAAAGTATGAACAGCGAGCGAATAAGAAGTGACAGCCAGCATCTACTT GTTAAGGCATTTTTGTACTCCCCATTTATAGTAAATATCATGGAGATGTG AATATAAATTATGTTTTTACCGTCTGCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10038-RA | 1229 | CG10038-RA | 30..1207 | 1..1178 | 5890 | 100 | Plus |
CG10038-RB | 1233 | CG10038-RB | 122..1155 | 145..1178 | 5170 | 100 | Plus |
CG10038.a | 1155 | CG10038.a | 106..1136 | 148..1178 | 5155 | 100 | Plus |
CG10038-RB | 1233 | CG10038-RB | 56..121 | 1..66 | 330 | 100 | Plus |
CG10038.a | 1155 | CG10038.a | 40..105 | 1..66 | 330 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 8174366..8174754 | 1177..789 | 1915 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 8174797..8175061 | 803..539 | 1325 | 100 | Minus |
chr3R | 27901430 | chr3R | 8175753..8175988 | 236..1 | 1180 | 100 | Minus |
chr3R | 27901430 | chr3R | 8175174..8175361 | 540..353 | 940 | 100 | Minus |
chr3R | 27901430 | chr3R | 8175574..8175691 | 352..235 | 590 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 12348986..12349375 | 1178..789 | 1920 | 99.5 | Minus |
3R | 32079331 | 3R | 12349418..12349682 | 803..539 | 1325 | 100 | Minus |
3R | 32079331 | 3R | 12350374..12350609 | 236..1 | 1180 | 100 | Minus |
3R | 32079331 | 3R | 12349795..12349982 | 540..353 | 940 | 100 | Minus |
3R | 32079331 | 3R | 12350195..12350312 | 352..235 | 590 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 12089817..12090206 | 1178..789 | 1920 | 99.4 | Minus |
3R | 31820162 | 3R | 12090249..12090513 | 803..539 | 1325 | 100 | Minus |
3R | 31820162 | 3R | 12091205..12091440 | 236..1 | 1180 | 100 | Minus |
3R | 31820162 | 3R | 12090626..12090813 | 540..353 | 940 | 100 | Minus |
3R | 31820162 | 3R | 12091026..12091143 | 352..235 | 590 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 8175753..8175988 | 1..236 | 100 | Minus | |
chr3R | 8175174..8175361 | 353..540 | 100 | <- | Minus |
chr3R | 8175574..8175689 | 237..352 | 100 | <- | Minus |
chr3R | 8174366..8174743 | 800..1177 | 100 | <- | Minus |
chr3R | 8174801..8175059 | 541..799 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10038-RA | 1..978 | 107..1084 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10038-RA | 1..978 | 107..1084 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10038-RA | 1..978 | 107..1084 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10038-RA | 1..978 | 107..1084 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10038-RA | 1..978 | 107..1084 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10038-RA | 1..1177 | 1..1177 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10038-RA | 1..1177 | 1..1177 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10038-RA | 1..1177 | 1..1177 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10038-RA | 1..1177 | 1..1177 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10038-RA | 36..1212 | 1..1177 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12348987..12349364 | 800..1177 | 100 | <- | Minus |
3R | 12349422..12349680 | 541..799 | 100 | <- | Minus |
3R | 12349795..12349982 | 353..540 | 100 | <- | Minus |
3R | 12350195..12350310 | 237..352 | 100 | <- | Minus |
3R | 12350374..12350609 | 1..236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12348987..12349364 | 800..1177 | 100 | <- | Minus |
3R | 12349422..12349680 | 541..799 | 100 | <- | Minus |
3R | 12349795..12349982 | 353..540 | 100 | <- | Minus |
3R | 12350195..12350310 | 237..352 | 100 | <- | Minus |
3R | 12350374..12350609 | 1..236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12348987..12349364 | 800..1177 | 100 | <- | Minus |
3R | 12349422..12349680 | 541..799 | 100 | <- | Minus |
3R | 12349795..12349982 | 353..540 | 100 | <- | Minus |
3R | 12350195..12350310 | 237..352 | 100 | <- | Minus |
3R | 12350374..12350609 | 1..236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 8175517..8175704 | 353..540 | 100 | <- | Minus |
arm_3R | 8175917..8176032 | 237..352 | 100 | <- | Minus |
arm_3R | 8174709..8175086 | 800..1177 | 100 | <- | Minus |
arm_3R | 8175144..8175402 | 541..799 | 100 | <- | Minus |
arm_3R | 8176096..8176331 | 1..236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12089818..12090195 | 800..1177 | 100 | <- | Minus |
3R | 12090253..12090511 | 541..799 | 100 | <- | Minus |
3R | 12090626..12090813 | 353..540 | 100 | <- | Minus |
3R | 12091026..12091141 | 237..352 | 100 | <- | Minus |
3R | 12091205..12091440 | 1..236 | 100 | Minus |
Translation from 106 to 1083
> LD19518.pep MWSRLIQIFRPLRSFRMSHSPPPASNCEEALIQLKNFGYAFDGEGVLRKV DPATGEPGKELFSYNVSDDAAENEKHYQKLANQIPEIVYALLEKNGLSRT YIPFDQPPERSSFVFSQPAKLSQSKKLLVLIHGSGYVKAGQWARSLIINN SLDHGTQLPYVRQAQKLGYDLLITNANDCTRFYNGKENPIKGVNTSVEHV KYVWKNIVLPAKPESVAIVAHSYGGSLTLDLVERFPDFFKESVFAIAFTD AAMGSPQAKNKEYLCDVACDWVASNTPLDTPVSQSKSSIRRISAGHTKHE WTSYSAIDSVFKFIEEKYEQRANKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17730-PA | 308 | GF17730-PA | 1..308 | 17..325 | 1288 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17143-PA | 324 | GG17143-PA | 2..324 | 3..325 | 1668 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15399-PA | 328 | GH15399-PA | 1..323 | 1..321 | 984 | 56 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10038-PA | 325 | CG10038-PA | 1..325 | 1..325 | 1704 | 100 | Plus |
CG10038-PB | 309 | CG10038-PB | 1..309 | 17..325 | 1620 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22459-PA | 311 | GI22459-PA | 2..309 | 20..325 | 991 | 57.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21558-PA | 308 | GL21558-PA | 4..308 | 21..325 | 1281 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10025-PB | 308 | GA10025-PB | 4..308 | 21..325 | 1282 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26026-PA | 325 | GM26026-PA | 1..325 | 1..325 | 1729 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20584-PA | 309 | GD20584-PA | 1..309 | 17..325 | 1626 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10059-PA | 312 | GJ10059-PA | 2..309 | 20..325 | 1050 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11976-PA | 307 | GK11976-PA | 5..303 | 23..321 | 1065 | 63.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24534-PA | 309 | GE24534-PA | 1..309 | 17..325 | 1563 | 93.9 | Plus |
Translation from 106 to 1083
> LD19518.hyp MWSRLIQIFRPLRSFRMSHSPPPASNCEEALIQLKNFGYAFDGEGVLRKV DPATGEPGKELFSYNVSDDAAENEKHYQKLANQIPEIVYALLEKNGLSRT YIPFDQPPERSSFVFSQPAKLSQSKKLLVLIHGSGYVKAGQWARSLIINN SLDHGTQLPYVRQAQKLGYDLLITNANDCTRFYNGKENPIKGVNTSVEHV KYVWKNIVLPAKPESVAIVAHSYGGSLTLDLVERFPDFFKESVFAIAFTD AAMGSPQAKNKEYLCDVACDWVASNTPLDTPVSQSKSSIRRISAGHTKHE WTSYSAIDSVFKFIEEKYEQRANKK*