BDGP Sequence Production Resources |
Search the DGRC for LD19544
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 195 |
Well: | 44 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG2608-RA |
Protein status: | LD19544.pep: gold |
Preliminary Size: | 1566 |
Sequenced Size: | 1461 |
Gene | Date | Evidence |
---|---|---|
CG2608 | 2001-10-10 | Blastp of sequenced clone |
CG2608 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2608 | 2008-04-29 | Release 5.5 accounting |
CG2608 | 2008-08-15 | Release 5.9 accounting |
CG2608 | 2008-12-18 | 5.12 accounting |
1461 bp (1461 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061268
> LD19544.complete AAGCACCGGTAGTCAATATAATTATAATTACATTAAACCACCTAAAACAA GCTGATCAACCGCAATCAAACATCTCAACGGGATAATAATAAACGCCAGA GAGTGGCGCACATCCGCCAATTGCTCAACATTAAGCGAGGAAAACACGGC GGAAAAATGGATCTGCTCGACTCAATACTCAACGCCATGGATGCGCCGCC TGCCAACAACGAGCAACAGAAGACGCTGATCAAGAAACAGCGCGAAATGT TAGAGCGGATGCAGAACAAACAGAAAGAGGAGCTCCTCCGATTCCGAAAA TATGTAGACGAACGGATGGGGCGATTCGCCAAGGACGACAGGCGATGCAT CGAGTTTCAGCCGCTGGATAAAGTGCATCGCTCGGTGATCCACGAAGTAG CCGAAAATGGCGGCTTCATTGCCATGAGCTTTGGCCGCGAGGATGTGGAC CGACATTCGGTTGTGTACAAAAAGGAACACGCTCCTGGCGAGGATGAGGT CACGGCCCGTCGGAACGGAGACGGTTGGAACGAGGAGATAGCCAAGGAGT ACGCGGAGCGACGGCGGGAACGATTGGCGCAGGAGCAAAGTGACAAAGAA GCCTCCACATCCGAAGCAGCAAGTTCAGGCTCGTCCACATCCACATCAGC GGATCAGGACTCCGGCGAAGTTAAGCCCACGACCAACTACAAGGCCAAGT ATGCCCACCTCATCGGAGAGTCGGCCGCACTGCAGGCGGCCCGTAAGACG GAGACCAACCAAAGCTACGGATTCGTGCCTAGCAAGAATAAGAAGGATGT GCGCTCCATCGAACAAACTTTGGCCGACATCCAGGCCAAAAAGCGTCTGC GATTGGCTCAGCAGCAGGAGCTGGAGCAAGAGCAGCAAGCGCAAGAGGCA ACCACATCCACAGAGGACCCATGAGTCGCCTGTGACCCAATTAGTATACA GATAGCTCACTTAATGCAAGACTGTCGCAACCAAAAAAAAGGATTATACT TCTTAAATCAGAATCAGAGAATCAGACATGACATGCTCGTCTTGTTCGCA AACTCCTGCTCGATAACATCGACAATATTTGACAAAACAGAGCAGTAATC ATCTTCAGGGAGCCAAAGATTTTTAAATTTATAGTATTCATACTATGTTT TTGCCCACATTAATCGTATTTGGTAATAGGCTTGATACTAATTTTTATCT TAGGTTAGCCCCATTAAATTAAATGCCCTTTTTTTTTGAGTAATGACAGC CTTGTATCGAGTGAGATTAGTTTTGTTGATTCAGATTAGTCACATGAAAG GTCTCTGACTGCCATGTAAATCATAAGTAATAAGCAATTTCATTTGTTGG CCAATTAAGATCCGAAAGTTGTACATGTTTTAAGCAAGTTATGTGTCCGT AGCAGAGTCCGAATCGCAATATCTATTTATATAATAAAAACCTAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2608-RA | 1514 | CG2608-RA | 54..1507 | 1..1454 | 7270 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 20644293..20644397 | 1..105 | 100 | -> | Plus |
chr2L | 20644481..20645825 | 106..1443 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2608-RA | 1..768 | 157..924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2608-RA | 1..768 | 157..924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2608-RA | 1..768 | 157..924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2608-RA | 1..768 | 157..924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2608-RA | 1..768 | 157..924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2608-RA | 33..1475 | 1..1443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2608-RA | 31..1473 | 1..1443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2608-RA | 35..1477 | 1..1443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2608-RA | 33..1475 | 1..1443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2608-RA | 35..1477 | 1..1443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20645856..20645960 | 1..105 | 100 | -> | Plus |
2L | 20646044..20647381 | 106..1443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20645856..20645960 | 1..105 | 100 | -> | Plus |
2L | 20646044..20647381 | 106..1443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20645856..20645960 | 1..105 | 100 | -> | Plus |
2L | 20646044..20647381 | 106..1443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 20645856..20645960 | 1..105 | 100 | -> | Plus |
arm_2L | 20646044..20647381 | 106..1443 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20646044..20647381 | 106..1443 | 100 | Plus | |
2L | 20645856..20645960 | 1..105 | 100 | -> | Plus |
Translation from 156 to 923
> LD19544.pep MDLLDSILNAMDAPPANNEQQKTLIKKQREMLERMQNKQKEELLRFRKYV DERMGRFAKDDRRCIEFQPLDKVHRSVIHEVAENGGFIAMSFGREDVDRH SVVYKKEHAPGEDEVTARRNGDGWNEEIAKEYAERRRERLAQEQSDKEAS TSEAASSGSSTSTSADQDSGEVKPTTNYKAKYAHLIGESAALQAARKTET NQSYGFVPSKNKKDVRSIEQTLADIQAKKRLRLAQQQELEQEQQAQEATT STEDP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15346-PA | 251 | GF15346-PA | 1..251 | 1..255 | 1066 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21242-PA | 255 | GG21242-PA | 1..255 | 1..255 | 1321 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10873-PA | 249 | GH10873-PA | 1..231 | 1..233 | 1044 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2608-PA | 255 | CG2608-PA | 1..255 | 1..255 | 1290 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18247-PA | 260 | GI18247-PA | 1..236 | 1..233 | 1026 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18511-PA | 266 | GL18511-PA | 1..231 | 1..232 | 1043 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15399-PA | 267 | GA15399-PA | 1..232 | 1..232 | 1053 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23358-PA | 255 | GM23358-PA | 1..255 | 1..255 | 1326 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24270-PA | 254 | GD24270-PA | 1..254 | 1..255 | 1062 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22963-PA | 260 | GJ22963-PA | 1..250 | 1..251 | 1004 | 79.1 | Plus |
Dvir\GJ16745-PA | 890 | GJ16745-PA | 1..290 | 1..255 | 714 | 51.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15049-PA | 258 | GK15049-PA | 1..236 | 1..233 | 1071 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13315-PA | 255 | GE13315-PA | 1..255 | 1..255 | 1319 | 96.9 | Plus |
Translation from 156 to 923
> LD19544.hyp MDLLDSILNAMDAPPANNEQQKTLIKKQREMLERMQNKQKEELLRFRKYV DERMGRFAKDDRRCIEFQPLDKVHRSVIHEVAENGGFIAMSFGREDVDRH SVVYKKEHAPGEDEVTARRNGDGWNEEIAKEYAERRRERLAQEQSDKEAS TSEAASSGSSTSTSADQDSGEVKPTTNYKAKYAHLIGESAALQAARKTET NQSYGFVPSKNKKDVRSIEQTLADIQAKKRLRLAQQQELEQEQQAQEATT STEDP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2608-PA | 255 | CG2608-PA | 1..255 | 1..255 | 1290 | 100 | Plus |