BDGP Sequence Production Resources |
Search the DGRC for LD19609
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 196 |
Well: | 9 |
Vector: | pBS SK- |
Associated Gene/Transcript | ImpE2-RA |
Protein status: | LD19609.pep: gold |
Preliminary Size: | 1705 |
Sequenced Size: | 1694 |
Gene | Date | Evidence |
---|---|---|
CG1934 | 2001-10-10 | Blastp of sequenced clone |
CG1934 | 2003-01-01 | Sim4 clustering to Release 3 |
ImpE2 | 2008-04-29 | Release 5.5 accounting |
ImpE2 | 2008-08-15 | Release 5.9 accounting |
ImpE2 | 2008-12-18 | 5.12 accounting |
1694 bp (1694 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061270
> LD19609.complete CACATCTTGAAATCGAAGGAGATATAGGAGATAAGTCGCGATAATGAAGC CCGTTGCCTTGATCCTGGTTTTCCTGGCCATTAGCCAAGCCAGAGTACTC AACTTGCCCAAGGAGGCGATCGATATTCCTGTGGCCATTGTCGAGGATAA GGAGCCACCAGTAGCTTTGTCTTTGGTCAAAGAGGAAGTTAAGGCAGAGG AAGTTAAGCCAGAGGAAGTGAAACCAATTGCTCAAGAAGAGAAAGCCAAG GATCTCAAGGAGGAAGTTAAGCCAGAAATTAAGCCTGAAATCAAAGAGCA GCCTAAGCCTGATATAAAAGACGAGATTAAGGAAGATTTAAAGGCAGACA TTAAGGAGGAGCTCAAGGAGAAGATTGAAGAGCAGATCAACGAGTTGCCT AATGCTAAGCCCCTGGAGCTGAAGGAAAAATCCCTGGAAGCTGAGGAGAA ACCTCAGGAAATCAAAGAAGAAGTTCAGCAGCCAGAAATCAAAAAAGAGG CCACTGAAATCAAAGAGGAACCTGCTCAGAACATTCTGAAATCTCTGCCA GCTGAAGAGACTGTCGTTGTGCCTGCCGAGGAACTTTCCCCGAATCCGGT GGAGCAAGAGCAGTCGGAAAACCAGGACGCCGCGCATCCTCAGGTCCGTC AAGCCACCCAAGCCACGCCCACCCAGCAGAGCACCACCCAGGGCAACTTT GTCCAGCAGTTGATCCAGAACTCGCCAATTGGTCAGTTCCTCAATCAGTT CCAGCCCCAGCCAGCTGCTGCTGCCGCTCCAGCAGCAGCACAAGTCCAGG CGGATGATGCCGCCGCTGCGGCACCTGCAACTCCGGCTCCCACGGTGCCC GGTTTCCTGAATCCCCAGGCCGCCATCACCTCCGCCCAACAGGCCGTGCA AAATGCGGCCCAAAGTGCCGTCAATGCCACCACCCAGGCCTTCCAGGGCA TCCAACAGTTTGCCAGCAACCTGGGCAATCAGTTCCAGAACACCCTGTCC AGCTTGACTGGCCAGCAGCAGCAGGCGGTGTCCACCACTCCGCGTCCACC AGGTCCCATCCAGCAGTTTGTCAACAATGTTTTCGGTGGCAATAACAATG CCACGGCTGCCGCACCGCCTGCCCAGCAAAGTGGCAATCCTCTGCAGGGA ATTATCAACTTCCTGGGCGGCAATCGTCCACAGAACGCACCAGCTGCCGC ACCAGCCACTCAGGCCACAGAGAAGCCAGCCGTAGATGACAAAATCGATC CTGCCAATGATGAGGTGGGTGAATTCGTTCCGGAATCCGATAATGAGCTG CGTGCGAGTGGCGAAAATATTGATGATTCCTTCGAGGATGCTGGCGTACC GTCCAACGAGGTTATTGTGGTCAACGACGATGCCGGCGAGGAGGGAAATG CTGTCCAGAATCATCCAGTGGCCACCGATGCAGTGGCTCTCTAATGGGTT GAGATGCCATTATTGCCATTAGCTAACCCCACAAACCAACCGACTGACGC CCGTTTTCGTCGACATTTTTCGATTCAAATTGAGAACGAAAAGGGAAAAT GCTTCTTTAGTTTTCTAAGTGCATGCACCGCAACAAATTATTTATTTCAT ACTCAGCCCAGGAATTTGAATATAAACAAATGAGAGAACACAAATCATTA AATAAAACAAATAACTTATAATAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ImpE2-RA | 1705 | ImpE2-RA | 33..1705 | 1..1673 | 8365 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 3510385..3512056 | 1672..1 | 8285 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 3510973..3512645 | 1673..1 | 8365 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 3510973..3512645 | 1673..1 | 8365 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 628..712 | 748..832 | 137 | 62.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3510385..3512056 | 1..1672 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE2-RA | 1..1401 | 44..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE2-RA | 1..1401 | 44..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE2-RA | 1..1401 | 44..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE2-RA | 1..1401 | 44..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE2-RA | 1..1401 | 44..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE2-RA | 33..1704 | 1..1672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE2-RA | 33..1704 | 1..1672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE2-RA | 37..1708 | 1..1672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE2-RA | 33..1704 | 1..1672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ImpE2-RA | 37..1708 | 1..1672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3510974..3512645 | 1..1672 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3510974..3512645 | 1..1672 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3510974..3512645 | 1..1672 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3510974..3512645 | 1..1672 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3510974..3512645 | 1..1672 | 100 | Minus |
Translation from 43 to 1443
> LD19609.hyp MKPVALILVFLAISQARVLNLPKEAIDIPVAIVEDKEPPVALSLVKEEVK AEEVKPEEVKPIAQEEKAKDLKEEVKPEIKPEIKEQPKPDIKDEIKEDLK ADIKEELKEKIEEQINELPNAKPLELKEKSLEAEEKPQEIKEEVQQPEIK KEATEIKEEPAQNILKSLPAEETVVVPAEELSPNPVEQEQSENQDAAHPQ VRQATQATPTQQSTTQGNFVQQLIQNSPIGQFLNQFQPQPAAAAAPAAAQ VQADDAAAAAPATPAPTVPGFLNPQAAITSAQQAVQNAAQSAVNATTQAF QGIQQFASNLGNQFQNTLSSLTGQQQQAVSTTPRPPGPIQQFVNNVFGGN NNATAAAPPAQQSGNPLQGIINFLGGNRPQNAPAAAPATQATEKPAVDDK IDPANDEVGEFVPESDNELRASGENIDDSFEDAGVPSNEVIVVNDDAGEE GNAVQNHPVATDAVAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ImpE2-PA | 466 | CG1934-PA | 1..466 | 1..466 | 2336 | 100 | Plus |
sls-PY | 10625 | CG1915-PY | 8317..8499 | 18..190 | 171 | 29.9 | Plus |
sls-PZ | 15155 | CG1915-PZ | 13170..13352 | 18..190 | 171 | 29.9 | Plus |
sls-PW | 15478 | CG1915-PW | 13170..13352 | 18..190 | 171 | 29.9 | Plus |
sls-PS | 15481 | CG1915-PS | 13173..13355 | 18..190 | 171 | 29.9 | Plus |
Translation from 43 to 1443
> LD19609.pep MKPVALILVFLAISQARVLNLPKEAIDIPVAIVEDKEPPVALSLVKEEVK AEEVKPEEVKPIAQEEKAKDLKEEVKPEIKPEIKEQPKPDIKDEIKEDLK ADIKEELKEKIEEQINELPNAKPLELKEKSLEAEEKPQEIKEEVQQPEIK KEATEIKEEPAQNILKSLPAEETVVVPAEELSPNPVEQEQSENQDAAHPQ VRQATQATPTQQSTTQGNFVQQLIQNSPIGQFLNQFQPQPAAAAAPAAAQ VQADDAAAAAPATPAPTVPGFLNPQAAITSAQQAVQNAAQSAVNATTQAF QGIQQFASNLGNQFQNTLSSLTGQQQQAVSTTPRPPGPIQQFVNNVFGGN NNATAAAPPAQQSGNPLQGIINFLGGNRPQNAPAAAPATQATEKPAVDDK IDPANDEVGEFVPESDNELRASGENIDDSFEDAGVPSNEVIVVNDDAGEE GNAVQNHPVATDAVAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10264-PA | 464 | GF10264-PA | 1..464 | 1..466 | 1100 | 66 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14254-PA | 443 | GG14254-PA | 1..443 | 1..466 | 1337 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15050-PA | 503 | GH15050-PA | 1..490 | 1..459 | 652 | 46.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ImpE2-PA | 466 | CG1934-PA | 1..466 | 1..466 | 2336 | 100 | Plus |
sls-PY | 10625 | CG1915-PY | 8317..8499 | 18..190 | 171 | 29.9 | Plus |
sls-PZ | 15155 | CG1915-PZ | 13170..13352 | 18..190 | 171 | 29.9 | Plus |
sls-PW | 15478 | CG1915-PW | 13170..13352 | 18..190 | 171 | 29.9 | Plus |
sls-PS | 15481 | CG1915-PS | 13173..13355 | 18..190 | 171 | 29.9 | Plus |
sls-PU | 15953 | CG1915-PU | 13645..13827 | 18..190 | 171 | 29.9 | Plus |
sls-PV | 16146 | CG1915-PV | 13838..14020 | 18..190 | 171 | 29.9 | Plus |
sls-PT | 18017 | CG1915-PT | 15709..15891 | 18..190 | 171 | 29.9 | Plus |
sls-PX | 18031 | CG1915-PX | 15723..15905 | 18..190 | 171 | 29.9 | Plus |
sls-PR | 18117 | CG1915-PR | 16132..16314 | 18..190 | 171 | 29.9 | Plus |
sls-PQ | 18440 | CG1915-PQ | 16132..16314 | 18..190 | 171 | 29.9 | Plus |
sls-PP | 18468 | CG1915-PP | 16153..16335 | 18..190 | 171 | 29.9 | Plus |
CG12009-PB | 864 | CG12009-PB | 610..799 | 54..250 | 157 | 28.6 | Plus |
CG12009-PA | 905 | CG12009-PA | 651..840 | 54..250 | 157 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12817-PA | 445 | GI12817-PA | 1..417 | 1..450 | 741 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13255-PA | 496 | GL13255-PA | 1..496 | 1..466 | 1009 | 58.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15137-PA | 496 | GA15137-PA | 1..496 | 1..466 | 1013 | 58 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14048-PA | 453 | GM14048-PA | 1..453 | 1..466 | 1643 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13325-PA | 450 | GD13325-PA | 1..450 | 1..466 | 1632 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12959-PA | 447 | GJ12959-PA | 1..447 | 1..466 | 918 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20372-PA | 417 | GK20372-PA | 1..394 | 1..446 | 696 | 52.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20682-PA | 469 | GE20682-PA | 1..469 | 1..466 | 1481 | 81.4 | Plus |