BDGP Sequence Production Resources |
Search the DGRC for LD19713
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 197 |
Well: | 13 |
Vector: | pBS SK- |
Associated Gene/Transcript | Mcm6-RA |
Protein status: | LD19713.pep: gold |
Sequenced Size: | 2756 |
Gene | Date | Evidence |
---|---|---|
CG4039 | 2007-09-25 | DGC5 pick |
Mcm6 | 2008-04-29 | Picked prior to 5.5 |
2756 bp assembled on 2009-07-29
GenBank Submission: BT088975.1
> LD19713.complete CAAGAAACGAAAGCAATCTCGGAATTTAGCGCGCAATTCACCAGTTTGAA GCAAGAAGTGACCCAAAATGGATGTGGCAGATGCTCAGGTTGGCCAGCTG CGCGTAAAAGACGAGGTGGGCATTCGGGCCCAGAAGTTGTTTCAGGATTT CCTCGAGGAATTCAAGGAGGATGGCGAGATCAAGTACACGCGCCCAGCCG CCAGCTTGGAATCCCCGGATCGCTGCACCCTGGAGGTCAGCTTCGAGGAT GTGGAGAAATACGATCAGAATCTGGCCACCGCCATTATCGAGGAGTACTA CCACATCTATCCGTTCCTTTGCCAATCCGTTTCGAACTACGTTAAGGACC GGATTGGACTGAAGACCCAGAAGGATTGCTATGTGGCCTTCACGGAGGTG CCGACGCGTCACAAGGTTCGCGATCTGACCACCTCCAAAATCGGCACCCT CATCCGCATCTCCGGCCAGGTGGTGCGCACCCATCCCGTACATCCGGAGC TTGTTTCCGGCGTCTTCATGTGCCTCGATTGCCAGACGGAAATTCGGAAC GTAGAGCAGCAGTTCAAGTTCACCAATCCCACCATTTGCCGCAATCCCGT GTGCTCCAATCGCAAGCGTTTCATGCTGGATGTGGAGAAGAGTCTGTTCT TGGACTTTCAAAAGATTCGCATCCAGGAGACGCAAGCCGAGCTGCCGCGT GGCTGTATTCCCCGCGCGGTGGAGATTATCCTGCGCTCGGAGCTGGTGGA GACCGTTCAGGCTGGCGATCGCTATGATTTCACGGGCACTCTGATTGTGG TGCCCGATGTGAGTGTCCTGGCCGGAGTGGGCACACGGGCGGAGAACAGT TCACGCCACAAGCCCGGCGAGGGCATGGATGGCGTCACTGGCCTAAAGGC ACTGGGCATGCGAGAGCTCAACTATCGGATGGCCTTCCTTGCCTGCAGTG TTCAGGCAACGACAGCACGTTTTGGCGGCACCGATCTGCCCATGTCGGAG GTGACAGCCGAGGATATGAAGAAGCAGATGACAGATGCCGAGTGGCACAA GATCTATGAGATGTCCAAGGATCGCAATCTCTACCAGAATCTAATTAGCA GCCTCTTTCCCTCGATCTACGGCAACGATGAGGTCAAGCGGGGCATTCTT CTGCAGCAATTCGGTGGCGTTGCGAAGACCACCACCGAAAAGACATCGCT TCGTGGCGACATCAATGTGTGCATCGTTGGCGATCCCAGCACGGCCAAGT CACAGTTCCTCAAGCAGGTATCCGACTTCTCGCCGCGTGCGATCTACACC TCGGGCAAGGCATCCTCGGCAGCGGGCTTAACCGCTGCGGTTGTGCGCGA CGAGGAGTCCTTTGACTTTGTCATCGAGGCGGGCGCCCTCATGTTGGCCG ACAATGGCATTTGCTGCATTGACGAGTTCGATAAGATGGATCAGCGCGAT CAGGTGGCCATTCACGAGGCCATGGAACAGCAGACCATATCGATTGCACG CGCCGGCGTACGAGCCACACTCAATGCGCGCACTTCGATTCTGGCCGCCG CCAATCCCATTAATGGTCGCTACGATCGCTCCAAGAGTTTGCAACAAAAT ATTCAGCTATCGGCACCGATTATGTCGCGATTCGATCTGTTCTTCATTCT CGTGGACGAATGCAATGAGGTGGTGGACTATGCCATTGCTCGCAAGATCG TTGATCTGCACTCGAACATCGAGGAGTCCGTGGAGCGGGCATATACGCGC GAAGAGGTCCTTCGCTATGTGACATTTGCGCGGCAATTTAAGCCGGTTAT TAGCCAGGAGGCCGGACACATGCTGGTCGAGAACTATGGCCATTTGAGGC AGCGCGATACGGGCACGTCGGGCAGGAGCACCTGGAGGATAACGGTGCGT CAGCTGGAGTCCATGATTCGACTGAGCGAGGCCATGGCCAAGCTGGAGTG CTCGAATCGCGTGCTGGAGCGACACGTCAAGGAGGCCTTCCGTTTGCTCA ACAAGTCCATCATTCGCGTGGAGCAACCGGATATTCATTTAGATGACGAC GAGGGTCTGGACATGGACGATGGCATTCAGCACGACATCGACATGGAGAA CAATGGAGCAGCGGCCAATGTGGATGAGAACAATGGTATGGACACATCCG CCAGCGGCGCCGTGCAGAAGAAGAAGTTCACGCTTTCGTTCGAGGATTAC AAGAATCTGTCCACCATGCTGGTGTTGCATATGCGCGCCGAGGAGGCGCG CTGCGAGGTGGAGGGCAACGATACGGGCATCAAGCGCAGCAATGTGGTCA CCTGGTATCTGGAGCAGGTGGCGGACCAAATCGAATCCGAGGATGAGTTA ATTTCTCGCAAAAATCTCATCGAGAAGCTTATCGATCGCCTCATCTATCA CGATCAGGTCATTATTCCGCTCAAGACATCCACGCTGAAGCCGAGAATTC AGGTACAAAAGGATTTCGTGGAGGAGGACGATCCCCTGCTGGTGGTGCAT CCCAACTACGTTGTGGAGTGATCCCAGCCGATCAACAGTTTATTACTATG CCCTAAATCTAGCTGGTTAAGTTTCTGTTTCCGCGTCTTGCTTTTTTTTG CTCACCCAAACAAACAATGTATTTAGGCAGTAAGTTTATAGTTTAGAGAC ATTATTGAAATCCATTAAGGATTTCTTGGTTCAGTTACGTTCCAAATCAT TCATGTTTTCGCCGAAATAAACGTTCATCTCAAGATTCAAAAAAAAAAAA AAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6566611..6569348 | 1..2738 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mcm6-RA | 1..2454 | 68..2521 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mcm6-RA | 1..2454 | 68..2521 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mcm6-RA | 1..2454 | 68..2521 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mcm6-RA | 1..2454 | 68..2521 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mcm6-RA | 51..2784 | 1..2734 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mcm6-RA | 51..2784 | 1..2734 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mcm6-RA | 51..2788 | 1..2738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mcm6-RA | 53..2790 | 1..2738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6674439..6677176 | 1..2738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6674439..6677176 | 1..2738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6674439..6677176 | 1..2738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6568472..6571209 | 1..2738 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6682537..6685274 | 1..2738 | 100 | Plus |
Translation from 67 to 2520
> LD19713.pep MDVADAQVGQLRVKDEVGIRAQKLFQDFLEEFKEDGEIKYTRPAASLESP DRCTLEVSFEDVEKYDQNLATAIIEEYYHIYPFLCQSVSNYVKDRIGLKT QKDCYVAFTEVPTRHKVRDLTTSKIGTLIRISGQVVRTHPVHPELVSGVF MCLDCQTEIRNVEQQFKFTNPTICRNPVCSNRKRFMLDVEKSLFLDFQKI RIQETQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTLIVVPDVSV LAGVGTRAENSSRHKPGEGMDGVTGLKALGMRELNYRMAFLACSVQATTA RFGGTDLPMSEVTAEDMKKQMTDAEWHKIYEMSKDRNLYQNLISSLFPSI YGNDEVKRGILLQQFGGVAKTTTEKTSLRGDINVCIVGDPSTAKSQFLKQ VSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGICC IDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANPING RYDRSKSLQQNIQLSAPIMSRFDLFFILVDECNEVVDYAIARKIVDLHSN IEESVERAYTREEVLRYVTFARQFKPVISQEAGHMLVENYGHLRQRDTGT SGRSTWRITVRQLESMIRLSEAMAKLECSNRVLERHVKEAFRLLNKSIIR VEQPDIHLDDDEGLDMDDGIQHDIDMENNGAAANVDENNGMDTSASGAVQ KKKFTLSFEDYKNLSTMLVLHMRAEEARCEVEGNDTGIKRSNVVTWYLEQ VADQIESEDELISRKNLIEKLIDRLIYHDQVIIPLKTSTLKPRIQVQKDF VEEDDPLLVVHPNYVVE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21421-PA | 820 | GF21421-PA | 1..820 | 1..817 | 4154 | 94.6 | Plus |
Dana\GF18817-PA | 887 | GF18817-PA | 184..784 | 25..653 | 823 | 32.5 | Plus |
Dana\GF13675-PA | 865 | GF13675-PA | 206..849 | 46..732 | 806 | 32.1 | Plus |
Dana\GF17903-PA | 733 | GF17903-PA | 31..648 | 22..649 | 797 | 32.8 | Plus |
Dana\GF21337-PA | 817 | GF21337-PA | 90..631 | 99..632 | 670 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19603-PA | 817 | GG19603-PA | 1..817 | 1..817 | 4260 | 97.3 | Plus |
Dere\GG24143-PA | 887 | GG24143-PA | 184..784 | 25..653 | 817 | 32.3 | Plus |
Dere\GG10740-PA | 866 | GG10740-PA | 205..850 | 46..732 | 800 | 32.1 | Plus |
Dere\GG17694-PA | 733 | GG17694-PA | 31..648 | 22..649 | 792 | 33.1 | Plus |
Dere\GG14355-PA | 720 | GG14355-PA | 16..640 | 28..647 | 731 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24715-PA | 820 | GH24715-PA | 1..820 | 1..817 | 3986 | 92.2 | Plus |
Dgri\GH14181-PA | 889 | GH14181-PA | 187..787 | 25..653 | 823 | 32.2 | Plus |
Dgri\GH19815-PA | 863 | GH19815-PA | 273..847 | 117..732 | 817 | 34.1 | Plus |
Dgri\GH18059-PA | 734 | GH18059-PA | 32..649 | 22..649 | 784 | 32.6 | Plus |
Dgri\GH15332-PA | 720 | GH15332-PA | 16..640 | 28..647 | 741 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mcm6-PA | 817 | CG4039-PA | 1..817 | 1..817 | 4170 | 100 | Plus |
Mcm2-PA | 887 | CG7538-PA | 184..784 | 25..653 | 804 | 31.8 | Plus |
dpa-PB | 866 | CG1616-PB | 182..850 | 26..732 | 797 | 31.4 | Plus |
dpa-PA | 866 | CG1616-PA | 182..850 | 26..732 | 797 | 31.4 | Plus |
Mcm5-PA | 733 | CG4082-PA | 22..648 | 5..649 | 782 | 32.4 | Plus |
Mcm7-PA | 720 | CG4978-PA | 16..710 | 28..719 | 755 | 30.1 | Plus |
Mcm3-PB | 818 | CG4206-PB | 2..656 | 6..654 | 670 | 29.9 | Plus |
Mcm3-PA | 819 | CG4206-PA | 2..657 | 6..654 | 664 | 29.7 | Plus |
rec-PB | 885 | CG31293-PB | 246..792 | 117..648 | 355 | 23.3 | Plus |
rec-PA | 885 | CG31293-PA | 246..792 | 117..648 | 355 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21813-PA | 819 | GI21813-PA | 1..819 | 1..817 | 4006 | 92.3 | Plus |
Dmoj\GI22091-PA | 884 | GI22091-PA | 183..782 | 25..653 | 822 | 31.9 | Plus |
Dmoj\GI20404-PA | 863 | GI20404-PA | 273..847 | 117..732 | 811 | 33.8 | Plus |
Dmoj\GI23737-PA | 734 | GI23737-PA | 32..649 | 22..649 | 787 | 33.3 | Plus |
Dmoj\GI12937-PA | 720 | GI12937-PA | 16..640 | 28..647 | 729 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13346-PA | 624 | GL13346-PA | 1..622 | 1..658 | 3172 | 90.4 | Plus |
Dper\GL20116-PA | 863 | GL20116-PA | 204..847 | 46..732 | 802 | 31.7 | Plus |
Dper\GL21915-PA | 707 | GL21915-PA | 32..649 | 22..649 | 794 | 33.4 | Plus |
Dper\GL14679-PA | 716 | GL14679-PA | 90..631 | 99..632 | 680 | 31.5 | Plus |
Dper\GL23360-PA | 422 | GL23360-PA | 3..319 | 348..653 | 658 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17904-PA | 815 | GA17904-PA | 1..815 | 1..817 | 4011 | 92.8 | Plus |
Dpse\GA20424-PA | 886 | GA20424-PA | 183..783 | 25..653 | 819 | 32.2 | Plus |
Dpse\GA14047-PA | 866 | GA14047-PA | 207..850 | 46..732 | 800 | 31.7 | Plus |
Dpse\GA17943-PA | 560 | GA17943-PA | 34..475 | 185..649 | 741 | 37.9 | Plus |
Dpse\GA18569-PA | 720 | GA18569-PA | 16..650 | 28..657 | 726 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12510-PA | 817 | GM12510-PA | 1..817 | 1..817 | 4343 | 98.9 | Plus |
Dsec\GM23713-PA | 887 | GM23713-PA | 184..784 | 25..653 | 820 | 32.3 | Plus |
Dsec\GM20786-PA | 866 | GM20786-PA | 205..850 | 46..732 | 801 | 32.1 | Plus |
Dsec\GM23897-PA | 733 | GM23897-PA | 31..648 | 22..649 | 791 | 33.2 | Plus |
Dsec\GM12401-PA | 820 | GM12401-PA | 284..632 | 331..632 | 606 | 39.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16811-PA | 817 | GD16811-PA | 1..817 | 1..817 | 4352 | 99.1 | Plus |
Dsim\GD18709-PA | 733 | GD18709-PA | 31..648 | 22..649 | 791 | 33.2 | Plus |
Dsim\GD14135-PA | 607 | GD14135-PA | 218..527 | 337..647 | 609 | 44.4 | Plus |
Dsim\GD20327-PA | 883 | GD20327-PA | 247..637 | 117..553 | 326 | 24.9 | Plus |
Dsim\GD18528-PA | 311 | GD18528-PA | 1..208 | 457..653 | 323 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16986-PA | 824 | GJ16986-PA | 1..824 | 1..817 | 3976 | 92.2 | Plus |
Dvir\GJ24206-PA | 885 | GJ24206-PA | 183..783 | 25..653 | 820 | 32.4 | Plus |
Dvir\GJ20076-PA | 864 | GJ20076-PA | 205..848 | 46..732 | 807 | 32.1 | Plus |
Dvir\GJ10583-PA | 734 | GJ10583-PA | 32..649 | 22..649 | 798 | 33.2 | Plus |
Dvir\GJ13078-PA | 720 | GJ13078-PA | 16..640 | 28..647 | 733 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15438-PA | 821 | GK15438-PA | 1..821 | 1..817 | 4002 | 91.8 | Plus |
Dwil\GK11732-PA | 884 | GK11732-PA | 181..781 | 25..653 | 824 | 33 | Plus |
Dwil\GK10701-PA | 871 | GK10701-PA | 212..859 | 46..736 | 801 | 31.9 | Plus |
Dwil\GK13898-PA | 734 | GK13898-PA | 32..649 | 22..649 | 793 | 32.6 | Plus |
Dwil\GK16745-PA | 720 | GK16745-PA | 136..640 | 106..647 | 716 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16763-PA | 817 | GE16763-PA | 1..817 | 1..817 | 4251 | 97.2 | Plus |
Dyak\GE25859-PA | 887 | GE25859-PA | 184..784 | 25..653 | 816 | 32.3 | Plus |
Dyak\GE23926-PA | 866 | GE23926-PA | 205..850 | 46..732 | 800 | 32.1 | Plus |
Dyak\GE26049-PA | 733 | GE26049-PA | 31..648 | 22..649 | 797 | 33.6 | Plus |
Dyak\Mcm3-PA | 821 | GE16395-PA | 90..631 | 99..632 | 678 | 31.8 | Plus |
Translation from 67 to 2520
> LD19713.hyp MDVADAQVGQLRVKDEVGIRAQKLFQDFLEEFKEDGEIKYTRPAASLESP DRCTLEVSFEDVEKYDQNLATAIIEEYYHIYPFLCQSVSNYVKDRIGLKT QKDCYVAFTEVPTRHKVRDLTTSKIGTLIRISGQVVRTHPVHPELVSGVF MCLDCQTEIRNVEQQFKFTNPTICRNPVCSNRKRFMLDVEKSLFLDFQKI RIQETQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTLIVVPDVSV LAGVGTRAENSSRHKPGEGMDGVTGLKALGMRELNYRMAFLACSVQATTA RFGGTDLPMSEVTAEDMKKQMTDAEWHKIYEMSKDRNLYQNLISSLFPSI YGNDEVKRGILLQQFGGVAKTTTEKTSLRGDINVCIVGDPSTAKSQFLKQ VSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGICC IDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANPING RYDRSKSLQQNIQLSAPIMSRFDLFFILVDECNEVVDYAIARKIVDLHSN IEESVERAYTREEVLRYVTFARQFKPVISQEAGHMLVENYGHLRQRDTGT SGRSTWRITVRQLESMIRLSEAMAKLECSNRVLERHVKEAFRLLNKSIIR VEQPDIHLDDDEGLDMDDGIQHDIDMENNGAAANVDENNGMDTSASGAVQ KKKFTLSFEDYKNLSTMLVLHMRAEEARCEVEGNDTGIKRSNVVTWYLEQ VADQIESEDELISRKNLIEKLIDRLIYHDQVIIPLKTSTLKPRIQVQKDF VEEDDPLLVVHPNYVVE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mcm6-PA | 817 | CG4039-PA | 1..817 | 1..817 | 4170 | 100 | Plus |
Mcm2-PA | 887 | CG7538-PA | 184..784 | 25..653 | 804 | 31.8 | Plus |
dpa-PB | 866 | CG1616-PB | 182..850 | 26..732 | 797 | 31.4 | Plus |
dpa-PA | 866 | CG1616-PA | 182..850 | 26..732 | 797 | 31.4 | Plus |
Mcm5-PA | 733 | CG4082-PA | 22..648 | 5..649 | 782 | 32.4 | Plus |