Clone LD19727 Report

Search the DGRC for LD19727

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:197
Well:27
Vector:pBS SK-
Associated Gene/TranscriptTsp96F-RA
Protein status:LD19727.pep: gold
Preliminary Size:2663
Sequenced Size:2673

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6120 2000-02-14 Blastp of sequenced clone
CG6120 2001-01-01 Release 2 assignment
CG6120 2003-01-01 Sim4 clustering to Release 3
Tsp96F 2008-04-29 Release 5.5 accounting
Tsp96F 2008-08-15 Release 5.9 accounting
Tsp96F 2008-12-18 5.12 accounting

Clone Sequence Records

LD19727.complete Sequence

2673 bp (2673 high quality bases) assembled on 2000-02-14

GenBank Submission: AF160941

> LD19727.complete
TTGGACGGACGCCTCGATGCACAAATAAAATTTTTAAAACAAATCGGGTG
CAACGGCCAATCGCGCAAACAGTGGCTCAAATCGGTGGATTTTAGCACGG
GAAATTTTAAAAAAATTTGAAAAATATAGTACAATCGAGCGGGTGTTTTG
AAAAAGTGCAAAAGGTCGAAAAGTGCAGGCGACACTGCAGTTCGGGGTTC
CTTGGAAAAAGAGCATCTCCAAGTGGTTGAAAAACCAGTTAAATTGCAGC
TACTTTTTAAGGAGTTACCTATTTAAGAATATCAATCCGCGCCATGGGTC
TCAACGGCTGCTGTTCGTGCGTCAAATATCTGATGGTCCTTATAAACATT
TTATTCTGGCTCATCGGACTGACCATCGTGGTGACCTCCGTTTGGATGCT
GACGGATCCCACATTTATGCTGTCGATGACACAGAACTACAATCATTATC
ACATAGCCCTGTATGTTTTCCTCGCCATCGGCATACTGATCACATTGGGC
GCATTCTTTGGCTGTTGCGGAGTCTGTCGTGAGTCGCAATGTCTGCTGGT
TTCGTTCTTCTGTGTCATACTCATCGTGATGGTGGCACAAATTGCAGCCG
GAGCATGGGCCTTCCACAACAAAGACAAGCTGGATGACATCGTGCGGGCG
GCTGTCAAGTCGTCAGTCCAGGAGGAGTACGGCCAGTCCACGATGAGTTC
GCGCACCGTCACCTTTGATACGCTGCAAAAGAATTTGAAATGCTGCGGCG
CCGATGGACCTGGAGATTGGGCCACGAGTCGGTTTAATAATGTGGATCGC
ACAAATATTGTGGAGATCGCCGTGTCTTCCATGAATGTCTTCTATAACAT
ACCCGAGTCCTGCTGCAAGGATAATCTAAAGGATAATGAGTGTGAGCTGT
CCAGACGCCTGAAATTTGGTGGCCCATTGAACAACGCCATTTATCAGCAG
GGCTGCGTGGACAAGCTGATTGAAATCATCTACGAGAACTGGGTCACCAT
TTTCGCCGTCACCGCCGCTGTCATTCTGCTGGAGCTGCTGTCCCTGACTT
TCGCCCTGAGCCTCTGCTGCGCGGTGAGGAATCAGCACTACAAGGCCTGA
GAATTACAGAATTCCCATAGGGAAATTACGGACGATGAGAAGTACTAACA
AACCAAATCGAAACGGATGCATAGCGAGCGTTATCACTGAAGACGTGCGA
ATGGGGAAAAGCATTTAGCAGCGAAGGCTAGCGAGATAATGTACGATGTT
CCCTGGTCAATACTTTAACAACACTACTGACGACAGAAACAACACACTTT
TGTAGTACTTTTAACAACAAGACAAGCGAAAACAACACGAGACAGATGAG
CAATTGTATTAGAGATGAGGCAACCATTTGGAATTTGTAAAACGTTTTTA
AAGCACAATCCACAGGAGCCTCAGAAGCGACTTTATATATGAACTTGATA
TGCCAGGAGAGCAAAAACATAAAACTCTTTTTTAACAGAATATTTCTACC
ACAAAAAACACAGACAGTAAACTTCATATATGTACGAACAACATAAGCAG
CTCCATAATACTTAGCCTAGCGAAACAATTTTGAATTCATAGATACATAC
TATATATTAAATATATAGATCAAAGCATAAGCACAAAAGTATAATGTTAA
ATGCCAAAAACAAATGGGAAAATGTAAAAAAGAAATCATGTACATTTCTC
TTACGATTTGTTTCCTCCCATAAGACTTTTGAATCGATTACTTTTTTTTT
TTGATGTTGCCATTTTTGTATGCTAACACAATGCCAAAAGAAAGAGATAT
GAAATCATATAGACGTATGATGTAACATATGATTATAGCATTCCACAAGA
ATGAGAATGATTGACAGATTTTTGTTCTGGTTAAAACGCATTGCCATCCA
AAGACCCAGCCGAAAATATATTTTCAAATCACTTCTGAACCTTGTGCAAA
ATGTTGTGCTAAAATCGAATACCATTCAATTTGTAGAGCTTCGCGAAATT
AAATGCCAAATATTTTATGTATTTACAAAATTGTAATTTAATTTATTTAT
GATCTATTTATTTGAGCATAAGCTAGGAGCAAAAGCAAAACGTTAGGAAA
TTATATGTAAGTGTTGGCCATTCTGTTGACAAACAGCATTCTGTATATTT
ACTCCTCAAACGATCCCCAAACAGTATAATGGTCAATATGATCGTACGTC
TATCTTAAACAGATGTTTGTGTACCCTTGCAGATATAATTATTGATTGTA
AGAACTGCAAGGATATATAGATAAGTTCGTGTGATTGTTGACCATGCTGT
GAGTTCGAAACCTTTAAAATCACCCACACTTGAAACGAATTTTGTCGAAT
CCAACTTACCTGCATCGAAATAATTTTTGATTTTTCCCTCCTTGTGTCAG
GGGAACTTATTTATATGGGAAACCGTTGAAGCAGCACAAAATGTTAAATG
AATAGTACACACGAACGAAACAAAAAGTCTCTATATTTACATTGTATTTT
TACCATACACCATAAACTAATTGAAGGATATATATTTTTTGTAACATTTT
CATTTTATTGTTGTTATATGTGAATTTTGTTGTTAGTTAAGCGTAGCCTG
AACGTCACACTTTGTACCCCTTCACAACGTTTAAATAAATTAAATCTACA
AAAATCAAAAAAAAAAAAAAAAA

LD19727.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:41:53
Subject Length Description Subject Range Query Range Score Percent Strand
Tsp96F-RA 2861 Tsp96F-RA 86..2743 1..2658 13290 100 Plus
Tsp96F.a 3433 Tsp96F.a 86..2743 1..2658 13290 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:12:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 21696502..21698211 2656..947 8445 99.6 Minus
chr3R 27901430 chr3R 21703988..21704346 359..1 1780 99.7 Minus
chr3R 27901430 chr3R 21698626..21698842 951..735 1085 100 Minus
chr3R 27901430 chr3R 21699500..21699695 554..359 935 98.5 Minus
chr3R 27901430 chr3R 21698913..21699093 734..554 905 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:07:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:12:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25873532..25875243 2658..947 8560 100 Minus
3R 32079331 3R 25881016..25881374 359..1 1795 100 Minus
3R 32079331 3R 25875658..25875874 951..735 1085 100 Minus
3R 32079331 3R 25876532..25876727 554..359 980 100 Minus
3R 32079331 3R 25875945..25876125 734..554 905 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:02:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 25614363..25616074 2658..947 8560 100 Minus
3R 31820162 3R 25621847..25622205 359..1 1795 100 Minus
3R 31820162 3R 25616489..25616705 951..735 1085 100 Minus
3R 31820162 3R 25617363..25617558 554..359 980 100 Minus
3R 31820162 3R 25616776..25616956 734..554 905 100 Minus
Blast to na_te.dros performed on 2019-03-17 00:12:06 has no hits.

LD19727.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:13:07 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 21696502..21698207 951..2656 97 <- Minus
chr3R 21698627..21698842 735..950 100 <- Minus
chr3R 21698913..21699092 555..734 100 <- Minus
chr3R 21699500..21699694 360..554 98 <- Minus
chr3R 21703988..21704346 1..359 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:54:11 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp96F-RA 1..807 294..1100 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:34:48 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp96F-RA 1..807 294..1100 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:58:39 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp96F-RB 1..855 294..1148 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:10:31 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp96F-RA 1..807 294..1100 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:13:29 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp96F-RB 1..855 294..1148 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:37:26 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp96F-RA 67..2722 1..2656 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:34:48 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp96F-RA 67..2722 1..2656 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:39 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp96F-RA 54..2709 1..2656 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:10:31 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp96F-RA 67..2722 1..2656 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:13:29 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
Tsp96F-RA 54..2709 1..2656 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:13:07 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25876532..25876726 360..554 100 <- Minus
3R 25873534..25875239 951..2656 100 <- Minus
3R 25875659..25875874 735..950 100 <- Minus
3R 25875945..25876124 555..734 100 <- Minus
3R 25881016..25881374 1..359 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:13:07 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25876532..25876726 360..554 100 <- Minus
3R 25873534..25875239 951..2656 100 <- Minus
3R 25875659..25875874 735..950 100 <- Minus
3R 25875945..25876124 555..734 100 <- Minus
3R 25881016..25881374 1..359 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:13:07 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25876532..25876726 360..554 100 <- Minus
3R 25873534..25875239 951..2656 100 <- Minus
3R 25875659..25875874 735..950 100 <- Minus
3R 25875945..25876124 555..734 100 <- Minus
3R 25881016..25881374 1..359 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:39 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21699256..21700961 951..2656 100 <- Minus
arm_3R 21701381..21701596 735..950 100 <- Minus
arm_3R 21701667..21701846 555..734 100 <- Minus
arm_3R 21702254..21702448 360..554 100 <- Minus
arm_3R 21706738..21707096 1..359 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:47:01 Download gff for LD19727.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25621847..25622205 1..359 100   Minus
3R 25614365..25616070 951..2656 100 <- Minus
3R 25616490..25616705 735..950 100 <- Minus
3R 25616776..25616955 555..734 100 <- Minus
3R 25617363..25617557 360..554 100 <- Minus

LD19727.pep Sequence

Translation from 293 to 1099

> LD19727.pep
MGLNGCCSCVKYLMVLINILFWLIGLTIVVTSVWMLTDPTFMLSMTQNYN
HYHIALYVFLAIGILITLGAFFGCCGVCRESQCLLVSFFCVILIVMVAQI
AAGAWAFHNKDKLDDIVRAAVKSSVQEEYGQSTMSSRTVTFDTLQKNLKC
CGADGPGDWATSRFNNVDRTNIVEIAVSSMNVFYNIPESCCKDNLKDNEC
ELSRRLKFGGPLNNAIYQQGCVDKLIEIIYENWVTIFAVTAAVILLELLS
LTFALSLCCAVRNQHYKA*

LD19727.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:33:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18228-PA 268 GF18228-PA 1..268 1..268 1279 87.3 Plus
Dana\GF12397-PA 239 GF12397-PA 7..239 8..267 240 26 Plus
Dana\GF25226-PA 236 GF25226-PA 10..228 6..254 228 25.7 Plus
Dana\GF15597-PA 313 GF15597-PA 17..257 9..252 225 26.4 Plus
Dana\GF12682-PA 227 GF12682-PA 6..224 8..267 215 27.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:33:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12212-PA 268 GG12212-PA 1..268 1..268 1419 99.6 Plus
Dere\GG22652-PA 239 GG22652-PA 7..239 8..267 238 25.7 Plus
Dere\GG21299-PA 235 GG21299-PA 3..227 4..263 226 27.3 Plus
Dere\GG15769-PA 236 GG15769-PA 10..228 6..254 225 25.3 Plus
Dere\GG25112-PA 312 GG25112-PA 18..252 9..251 222 27.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:33:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22383-PA 266 GH22383-PA 1..266 1..268 1316 92.9 Plus
Dgri\GH20509-PA 240 GH20509-PA 7..237 8..265 257 27.8 Plus
Dgri\GH14575-PA 236 GH14575-PA 10..228 6..254 227 25.3 Plus
Dgri\GH11020-PA 313 GH11020-PA 17..257 9..252 215 24.7 Plus
Dgri\GH15333-PA 267 GH15333-PA 9..255 9..255 214 24.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
Tsp96F-PC 268 CG6120-PC 1..268 1..268 1417 100 Plus
Tsp96F-PB 284 CG6120-PB 1..268 1..268 1417 100 Plus
Tsp96F-PA 268 CG6120-PA 1..268 1..268 1417 100 Plus
Tsp26A-PC 277 CG9093-PC 18..275 9..267 263 28.4 Plus
Tsp47F-PB 239 CG9033-PB 7..239 8..267 260 25.3 Plus
Tsp26A-PD 275 CG9093-PD 18..273 9..267 248 27 Plus
Tsp39D-PB 235 CG8666-PB 3..227 4..263 242 26.9 Plus
Tsp74F-PB 236 CG5492-PB 10..231 6..257 239 25.8 Plus
Tsp74F-PA 236 CG5492-PA 10..231 6..257 239 25.8 Plus
Tsp26A-PB 314 CG9093-PB 18..252 9..251 232 28 Plus
Tsp42Ea-PC 226 CG18817-PC 6..224 8..268 211 23.4 Plus
Tsp42Ea-PB 226 CG18817-PB 6..224 8..268 211 23.4 Plus
Tsp42Ea-PA 226 CG18817-PA 6..224 8..268 211 23.4 Plus
Tsp66E-PC 267 CG4999-PC 9..263 9..263 211 23.3 Plus
Tsp66E-PA 267 CG4999-PA 9..263 9..263 211 23.3 Plus
Tsp66E-PB 267 CG4999-PB 9..263 9..263 211 23.3 Plus
Tsp42Ed-PB 227 CG12846-PB 8..220 10..263 202 24.5 Plus
Tsp42Ed-PA 227 CG12846-PA 8..220 10..263 202 24.5 Plus
Tsp29Fa-PC 248 CG9494-PC 4..231 3..254 196 22.5 Plus
Tsp29Fa-PB 248 CG9494-PB 4..231 3..254 196 22.5 Plus
Tsp29Fa-PA 248 CG9494-PA 4..231 3..254 196 22.5 Plus
Tsp42Ee-PB 228 CG10106-PB 6..221 8..263 186 23 Plus
Tsp42Ee-PA 228 CG10106-PA 6..221 8..263 186 23 Plus
Tsp5D-PB 283 CG4690-PB 3..259 4..264 185 21.6 Plus
Tsp5D-PA 283 CG4690-PA 3..259 4..264 185 21.6 Plus
Tsp5D-PC 287 CG4690-PC 3..259 4..264 185 21.6 Plus
Tsp86D-PB 291 CG4591-PB 29..279 8..257 184 21.8 Plus
Tsp86D-PA 291 CG4591-PA 29..279 8..257 184 21.8 Plus
Tsp86D-PC 316 CG4591-PC 29..279 8..257 184 21.8 Plus
CG30160-PA 222 CG30160-PA 1..222 3..264 171 24.8 Plus
Tsp42Eb-PB 222 CG18816-PB 1..222 3..264 171 24.8 Plus
Tsp3A-PB 304 CG10742-PB 42..291 9..257 159 22.5 Plus
Tsp3A-PA 304 CG10742-PA 42..291 9..257 159 22.5 Plus
Tsp29Fb-PC 308 CG9496-PC 8..247 3..262 157 21.6 Plus
Tsp29Fb-PA 308 CG9496-PA 8..247 3..262 157 21.6 Plus
Tsp29Fb-PB 308 CG9496-PB 8..247 3..262 157 21.6 Plus
Tsp42Ec-PA 232 CG12847-PA 2..225 5..265 146 22 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:33:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24618-PA 268 GI24618-PA 1..268 1..268 1328 92.5 Plus
Dmoj\GI21055-PA 240 GI21055-PA 7..237 8..265 262 28.2 Plus
Dmoj\GI13972-PA 236 GI13972-PA 10..228 6..254 228 26.1 Plus
Dmoj\GI12231-PA 235 GI12231-PA 3..227 4..263 213 26.6 Plus
Dmoj\GI17539-PA 317 GI17539-PA 17..249 9..249 204 24.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22292-PA 268 GL22292-PA 1..268 1..268 1381 96.6 Plus
Dper\GL10398-PA 239 GL10398-PA 7..239 8..267 253 26.9 Plus
Dper\GL22737-PA 236 GL22737-PA 10..228 6..254 227 25.3 Plus
Dper\GL19049-PA 313 GL19049-PA 17..257 9..252 222 24.7 Plus
Dper\GL26662-PA 235 GL26662-PA 3..227 4..263 203 26.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:33:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19368-PA 268 GA19368-PA 1..268 1..268 1381 96.6 Plus
Dpse\GA21493-PA 239 GA21493-PA 7..239 8..267 260 27.2 Plus
Dpse\GA18924-PA 236 GA18924-PA 10..228 6..254 227 25.3 Plus
Dpse\GA21537-PA 313 GA21537-PA 17..257 9..252 222 24.7 Plus
Dpse\GA21246-PA 235 GA21246-PA 3..227 4..263 206 26.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:33:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10209-PA 268 GM10209-PA 1..268 1..268 1419 99.6 Plus
Dsec\GM13210-PA 63 GM13210-PA 1..53 35..87 284 100 Plus
Dsec\GM24293-PA 236 GM24293-PA 10..228 6..254 228 25.7 Plus
Dsec\GM18589-PA 254 GM18589-PA 18..254 9..253 224 26.2 Plus
Dsec\GM23410-PA 235 GM23410-PA 3..227 4..263 216 28.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:33:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18161-PA 268 GD18161-PA 1..268 1..268 1343 95.5 Plus
Dsim\GD25905-PA 246 GD25905-PA 7..246 8..267 230 24.6 Plus
Dsim\GD12362-PA 236 GD12362-PA 10..228 6..254 228 25.7 Plus
Dsim\GD23377-PA 314 GD23377-PA 18..252 9..251 224 26.4 Plus
Dsim\GD24319-PA 235 GD24319-PA 3..227 4..263 222 28 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:33:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24532-PA 268 GJ24532-PA 1..268 1..268 1344 94 Plus
Dvir\GJ21977-PA 240 GJ21977-PA 7..234 8..262 254 28.1 Plus
Dvir\GJ14111-PA 236 GJ14111-PA 10..228 6..254 230 25.7 Plus
Dvir\GJ15439-PA 313 GJ15439-PA 17..257 9..252 208 24.3 Plus
Dvir\GJ17850-PA 235 GJ17850-PA 3..227 4..263 199 25.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:33:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14385-PA 268 GK14385-PA 1..268 1..268 1344 93.7 Plus
Dwil\GK21888-PA 239 GK21888-PA 7..239 8..267 252 26.9 Plus
Dwil\GK14713-PA 313 GK14713-PA 17..257 9..252 240 26.7 Plus
Dwil\GK20576-PA 236 GK20576-PA 10..228 6..254 229 26.1 Plus
Dwil\GK18739-PA 235 GK18739-PA 3..227 4..263 192 25.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:33:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10657-PA 268 GE10657-PA 1..268 1..268 1422 100 Plus
Dyak\GE13526-PA 239 GE13526-PA 7..239 8..267 241 25.7 Plus
Dyak\GE25811-PA 275 GE25811-PA 18..273 9..267 233 25.6 Plus
Dyak\GE22102-PA 236 GE22102-PA 10..228 6..254 228 25.7 Plus
Dyak\GE12914-PA 235 GE12914-PA 3..227 4..263 217 27.3 Plus

LD19727.hyp Sequence

Translation from 293 to 1099

> LD19727.hyp
MGLNGCCSCVKYLMVLINILFWLIGLTIVVTSVWMLTDPTFMLSMTQNYN
HYHIALYVFLAIGILITLGAFFGCCGVCRESQCLLVSFFCVILIVMVAQI
AAGAWAFHNKDKLDDIVRAAVKSSVQEEYGQSTMSSRTVTFDTLQKNLKC
CGADGPGDWATSRFNNVDRTNIVEIAVSSMNVFYNIPESCCKDNLKDNEC
ELSRRLKFGGPLNNAIYQQGCVDKLIEIIYENWVTIFAVTAAVILLELLS
LTFALSLCCAVRNQHYKA*

LD19727.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:46:38
Subject Length Description Subject Range Query Range Score Percent Strand
Tsp96F-PC 268 CG6120-PC 1..268 1..268 1417 100 Plus
Tsp96F-PA 268 CG6120-PA 1..268 1..268 1417 100 Plus
Tsp96F-PB 284 CG6120-PB 1..268 1..268 1417 100 Plus
Tsp26A-PC 277 CG9093-PC 18..275 9..267 263 28.4 Plus
Tsp47F-PB 239 CG9033-PB 7..239 8..267 260 25.3 Plus