BDGP Sequence Production Resources |
Search the DGRC for LD20211
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 202 |
Well: | 11 |
Vector: | pBS SK- |
Associated Gene/Transcript | Tudor-SN-RA |
Protein status: | LD20211.pep: gold |
Sequenced Size: | 3160 |
Gene | Date | Evidence |
---|---|---|
CG7008 | 2002-11-21 | Blastp of sequenced clone |
CG7008 | 2003-01-01 | Sim4 clustering to Release 3 |
Tudor-SN | 2008-04-29 | Release 5.5 accounting |
Tudor-SN | 2008-08-15 | Release 5.9 accounting |
Tudor-SN | 2008-12-18 | 5.12 accounting |
3160 bp (3160 high quality bases) assembled on 2002-11-21
GenBank Submission: BT003270
> LD20211.complete ATTTTGAGAGCGGTTCTTCTCTTGGTCAAACTTCATTAGGTTGAAAGCGG TGTTTAGCTCCGAAACGCAATCAACGCAATATTCCGCTATTGAAGCCTAG TGCCACGGCCCTCTGCTAGTATCTCCCCCGCATTCAATAAAAAAATGGCA ACAGCAGCGAACACCGCGACAGCTGCCGGAGCAGCTAAAGACGCCCCGCC AGCGCCTACAAAGTCGTTGTCCGGCATTGTAAAGCAGGTTCTCTCCGGCG ATACGGTAGTTATTCGCGCAACTAAGGGTGCCCCGCCTCCGGAGAAACAA ATTACTTTCTCGCATGTCCTTGCCCCGAAGTTGGCCCGTCGTCCTGGCGC TGGCGGAGACGAGACCAAGGACGAGCCCTGGGCTTGGGAGTCGCGGGAAT TCTTGCGTAAAAAGTTGATAGGTGTGGAGGTGACTTTCACGTTTGACAAG CCAGCCAACTCGAACCGGGAGTACGGTTTTGTGTGGATCGGTAAGGACAA GGAAACCGGTGAAAATGTGGTCGAGTCGATTGTCCGAGAGGGCCTGGTGT CGGTCCGTCGAGAGGGACGTCCCACAGCCGAGCAGCAAACACTCATCGAG TTGGAGGACCAGGCGCGTGCAGCAGGCCGCGGAAAATGGTCGCCCACCGC AAGTGCCGCCGACAAGGTTCGCAACATCAAGTGGTCCCATGAGAATCCCG CACACCTGGTCGACATCTACGGAGGAAACCCCGTGAAGGCGATCATCGAG CACGTGCGCGATGGATCCACGGTCCGAGCATTCTTGCTGCCGGACTTCCA CTACATAACGCTAATGATTTCGGGCATCCGTTGTCCAGGAGTGAAATTAG ATGCTGATGGCAAGCCCGACCTCAGTGTAAAGGTGCCTTTTGCTGACGAA GCTCGCTACTATGTGGAAACCCGCCTGTTGCAACGCGATGTGGAAATCCG ACTGGAATCGGTTAACAACTCTAACTTCATTGGAACTATTCTGTATCCCA AGGGAAACATTGCAGAATCACTCCTGCGAGAGGGACTTGCCAAGTGTGTG GACTGGTCAATGGCTGTTATGAAGACAGGCACCGATAAACTGCGGGCTGC GGAGCGTTTTGCCAAGGAGAAGCGTCTTCGCCAATGGCAGGACTACCAAG CTAAAACTCCTGCTTTCAACTCGAAGGAGAAAGACTTCTCTGGAACAGTG GTGGAAGTCTTCAATGGCGATGCTATTAATGTACGTCTTTCCAATGGACA AGTAAAGAAGGTTTTCTTCTCGTCTATCAGGCCGCCGCGTGACCAACGCG CGGTTGTTGGCACCGATGGCGAGGAAATCGTCAAGGCACCACCACGCGGA AAAAACTACAGACCACTTTACGAAATTCCACACATGTTCGATGCCCGTGA GTTTCTGCGTAAAAAACTAATTAATAAAAAAGTTCAATGCAACCTGGACT ACATCTCACCGCCGCGCGAAAACTTCCCTGAGAAATACTGCTATACCGTC TCTATTGGCGGTCAGAACGTGGCTGAGGCAATGGTAGCCAAAGGTTTGGC AACATGTGTTCGCTATCGCCAGGACGACGATCAGAGATCTTCCGCCTATG ATCAATTGATTGCCGCCGAACAGCAAGCCATCAAGGGACTAAAGGGACTG CACGCAAAGAAGGATAACGCCACACTGCGTGTTAACGACCTGACTGTTGA TCATTCCCGAATTAAAGTTCAATACTTGCCATCGTGGCAGCGTGCTTTGC GTACTGAAGCCATTGTAGAGTTTGTCGCCAGCGGATCCCGCCTCCGAATC TTTGTACCGAAGGACAGTTGCCTGGTAACATTCCTGCTTGCTGGGATTTC ATGTCCGCGTTCCTCTCGTCCAGCGCTTAATGGCGTTCCTGCCCAAGAGG GGGAACCATTTGGCGACGAGGCTTTGACCTTTACCAGGGAGCGTGTCTTG CAACGCGACGTTTCTGTTCATATCGATACCACCGACAAGGCAGGATCTTC AGTGATTGGTTGGCTCTGGACGGACAGCGGCGCCAACTTGTCAGTTGCTC TTGTCGAAGAGGGTCTTGCTGAAGTGCACTTTAGTGCTGAAAAATCTGAA TACTACCGCCAGTTGAAGATTGCTGAAGACCGTGCCAAGGCCGCCAAAAA GAACATCTGGACAAACTACGTAGAAGAAGTGCCTAAAGAAAAAACTGTCA CCGAGGAAGAAAAGGAGGACAAGGTAGTGGCGGAGCGTAAAGTCAACTAC GAAAACGTTATTGTCACTGAGATCACCGAAACTCTGACATTCTTCGCGCA ATCTGTGGAGAGCGGATCCAAGCTAGAGTCGCTTATGAGCAAACTTCACG CCGATTTCCAGTCCAACCCACCCATCGCTGGATCGTACACGCCAAAGCGT GGTGACCTGGTGGCCGCTCAGTTTACACTTGATAATCAGTGGTATCGTGC CAAGGTGGAACGCGTGCAGGGCAGTAATGCTACAGTCCTGTACATCGATT ATGGAAACAAGGAGACACTTCCGACCAACCGTTTGGCAGCCCTGCCACCA GCCTTCAGCAGCGAAAAGCCCTACGCTACGGAGTATGCTTTGGCCTTAGT CGCCCTGCCAACTGACAACGAAGATAAGGAAGAAGCCTTGCGTGCCTTTT CCGAAGACGTTTTGAACCATAAGGTTCAACTCAATGTCGAGCTAAAGGTG ACTGGGTCGCCGAACTTGGCCACTCTTCGCGATCCAACTACTAAAGTCGA TTTTGGAAAGCAGCTTGTAGCCGAGGGCCTTGTTCTGGCCGAACAGCGTG GAGAGCGGAAGCTCAAGGAACTAGTGGACCAGTACAAAGCCGCGCAGGAA GCAGCTCGGGTCGCGCATCTGGCCATCTGGAAGTACGGTGACATAACGCA AGATGATGCGCCCGAGTTCCGCTAAAAGATGCCCGGAAACGTGGAGTAGG CCTGTGGCGTGGAGCGCGTTGCTAGCCGAAAAGATTGTCTGCCACATACC CGCCCTTTATATACATAACAACAAGCAAGAACTTAAAGAATATGAAATTA CTAATTCTATCTATACACCAATATATATGATACATATACCACATTGGAAA TACACAAATACATACATATGAGCAATGGCATGGAAAAAAAAAAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tudor-SN-RA | 3166 | Tudor-SN-RA | 25..3159 | 1..3135 | 15675 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 260265..261703 | 2514..1076 | 7195 | 100 | Minus |
chr3L | 24539361 | chr3L | 261931..262775 | 1079..235 | 4225 | 100 | Minus |
chr3L | 24539361 | chr3L | 259249..259869 | 3133..2513 | 3105 | 100 | Minus |
chr3L | 24539361 | chr3L | 264070..264308 | 239..1 | 1195 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 260311..261749 | 2514..1076 | 7195 | 100 | Minus |
3L | 28110227 | 3L | 261977..262821 | 1079..235 | 4225 | 100 | Minus |
3L | 28110227 | 3L | 259293..259915 | 3135..2513 | 3115 | 100 | Minus |
3L | 28110227 | 3L | 264116..264354 | 239..1 | 1195 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 260311..261749 | 2514..1076 | 7195 | 100 | Minus |
3L | 28103327 | 3L | 261977..262821 | 1079..235 | 4225 | 100 | Minus |
3L | 28103327 | 3L | 259293..259915 | 3135..2513 | 3115 | 100 | Minus |
3L | 28103327 | 3L | 264116..264354 | 239..1 | 1195 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 260265..261700 | 1079..2514 | 100 | <- | Minus |
chr3L | 259249..259867 | 2515..3133 | 100 | <- | Minus |
chr3L | 261932..262772 | 238..1078 | 100 | <- | Minus |
chr3L | 264072..264308 | 1..237 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tudor-SN-RA | 1..2781 | 145..2925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tudor-SN-RA | 1..2781 | 145..2925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tudor-SN-RA | 1..2781 | 145..2925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tudor-SN-RA | 1..2781 | 145..2925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tudor-SN-RA | 1..2781 | 145..2925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tudor-SN-RA | 25..3157 | 1..3133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tudor-SN-RA | 25..3157 | 1..3133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tudor-SN-RA | 27..3159 | 1..3133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tudor-SN-RA | 25..3157 | 1..3133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tudor-SN-RA | 27..3159 | 1..3133 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 259295..259913 | 2515..3133 | 100 | <- | Minus |
3L | 260311..261746 | 1079..2514 | 100 | <- | Minus |
3L | 261978..262818 | 238..1078 | 100 | <- | Minus |
3L | 264118..264354 | 1..237 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 259295..259913 | 2515..3133 | 100 | <- | Minus |
3L | 260311..261746 | 1079..2514 | 100 | <- | Minus |
3L | 261978..262818 | 238..1078 | 100 | <- | Minus |
3L | 264118..264354 | 1..237 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 259295..259913 | 2515..3133 | 100 | <- | Minus |
3L | 260311..261746 | 1079..2514 | 100 | <- | Minus |
3L | 261978..262818 | 238..1078 | 100 | <- | Minus |
3L | 264118..264354 | 1..237 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 259295..259913 | 2515..3133 | 100 | <- | Minus |
arm_3L | 260311..261746 | 1079..2514 | 100 | <- | Minus |
arm_3L | 261978..262818 | 238..1078 | 100 | <- | Minus |
arm_3L | 264118..264354 | 1..237 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 259295..259913 | 2515..3133 | 100 | <- | Minus |
3L | 260311..261746 | 1079..2514 | 100 | <- | Minus |
3L | 261978..262818 | 238..1078 | 100 | <- | Minus |
3L | 264118..264354 | 1..237 | 100 | Minus |
Translation from 144 to 2924
> LD20211.pep MATAANTATAAGAAKDAPPAPTKSLSGIVKQVLSGDTVVIRATKGAPPPE KQITFSHVLAPKLARRPGAGGDETKDEPWAWESREFLRKKLIGVEVTFTF DKPANSNREYGFVWIGKDKETGENVVESIVREGLVSVRREGRPTAEQQTL IELEDQARAAGRGKWSPTASAADKVRNIKWSHENPAHLVDIYGGNPVKAI IEHVRDGSTVRAFLLPDFHYITLMISGIRCPGVKLDADGKPDLSVKVPFA DEARYYVETRLLQRDVEIRLESVNNSNFIGTILYPKGNIAESLLREGLAK CVDWSMAVMKTGTDKLRAAERFAKEKRLRQWQDYQAKTPAFNSKEKDFSG TVVEVFNGDAINVRLSNGQVKKVFFSSIRPPRDQRAVVGTDGEEIVKAPP RGKNYRPLYEIPHMFDAREFLRKKLINKKVQCNLDYISPPRENFPEKYCY TVSIGGQNVAEAMVAKGLATCVRYRQDDDQRSSAYDQLIAAEQQAIKGLK GLHAKKDNATLRVNDLTVDHSRIKVQYLPSWQRALRTEAIVEFVASGSRL RIFVPKDSCLVTFLLAGISCPRSSRPALNGVPAQEGEPFGDEALTFTRER VLQRDVSVHIDTTDKAGSSVIGWLWTDSGANLSVALVEEGLAEVHFSAEK SEYYRQLKIAEDRAKAAKKNIWTNYVEEVPKEKTVTEEEKEDKVVAERKV NYENVIVTEITETLTFFAQSVESGSKLESLMSKLHADFQSNPPIAGSYTP KRGDLVAAQFTLDNQWYRAKVERVQGSNATVLYIDYGNKETLPTNRLAAL PPAFSSEKPYATEYALALVALPTDNEDKEEALRAFSEDVLNHKVQLNVEL KVTGSPNLATLRDPTTKVDFGKQLVAEGLVLAEQRGERKLKELVDQYKAA QEAARVAHLAIWKYGDITQDDAPEFR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24753-PA | 928 | GF24753-PA | 20..928 | 18..926 | 4529 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14673-PA | 925 | GG14673-PA | 1..925 | 1..926 | 4830 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15748-PA | 930 | GH15748-PA | 31..930 | 27..926 | 4334 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tudor-SN-PB | 926 | CG7008-PB | 1..926 | 1..926 | 4758 | 100 | Plus |
Tudor-SN-PA | 926 | CG7008-PA | 1..926 | 1..926 | 4758 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12526-PA | 929 | GI12526-PA | 1..929 | 1..926 | 4398 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16097-PA | 928 | GL16097-PA | 18..928 | 17..926 | 4438 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20026-PA | 928 | GA20026-PA | 18..928 | 17..926 | 4435 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14288-PA | 926 | GM14288-PA | 1..926 | 1..926 | 4882 | 98.7 | Plus |
Dsec\GM11258-PA | 438 | GM11258-PA | 1..418 | 373..790 | 2209 | 98.3 | Plus |
Dsec\GM11258-PA | 438 | GM11258-PA | 40..308 | 78..339 | 227 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25717-PA | 926 | GD25717-PA | 1..926 | 1..926 | 4892 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16044-PA | 929 | GJ16044-PA | 13..929 | 15..926 | 4501 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17654-PA | 878 | GK17654-PA | 30..878 | 25..926 | 4074 | 86.1 | Plus |
Dwil\GK23451-PA | 876 | GK23451-PA | 27..876 | 24..926 | 4006 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21033-PA | 926 | GE21033-PA | 1..926 | 1..926 | 4859 | 98.2 | Plus |
Translation from 144 to 2924
> LD20211.hyp MATAANTATAAGAAKDAPPAPTKSLSGIVKQVLSGDTVVIRATKGAPPPE KQITFSHVLAPKLARRPGAGGDETKDEPWAWESREFLRKKLIGVEVTFTF DKPANSNREYGFVWIGKDKETGENVVESIVREGLVSVRREGRPTAEQQTL IELEDQARAAGRGKWSPTASAADKVRNIKWSHENPAHLVDIYGGNPVKAI IEHVRDGSTVRAFLLPDFHYITLMISGIRCPGVKLDADGKPDLSVKVPFA DEARYYVETRLLQRDVEIRLESVNNSNFIGTILYPKGNIAESLLREGLAK CVDWSMAVMKTGTDKLRAAERFAKEKRLRQWQDYQAKTPAFNSKEKDFSG TVVEVFNGDAINVRLSNGQVKKVFFSSIRPPRDQRAVVGTDGEEIVKAPP RGKNYRPLYEIPHMFDAREFLRKKLINKKVQCNLDYISPPRENFPEKYCY TVSIGGQNVAEAMVAKGLATCVRYRQDDDQRSSAYDQLIAAEQQAIKGLK GLHAKKDNATLRVNDLTVDHSRIKVQYLPSWQRALRTEAIVEFVASGSRL RIFVPKDSCLVTFLLAGISCPRSSRPALNGVPAQEGEPFGDEALTFTRER VLQRDVSVHIDTTDKAGSSVIGWLWTDSGANLSVALVEEGLAEVHFSAEK SEYYRQLKIAEDRAKAAKKNIWTNYVEEVPKEKTVTEEEKEDKVVAERKV NYENVIVTEITETLTFFAQSVESGSKLESLMSKLHADFQSNPPIAGSYTP KRGDLVAAQFTLDNQWYRAKVERVQGSNATVLYIDYGNKETLPTNRLAAL PPAFSSEKPYATEYALALVALPTDNEDKEEALRAFSEDVLNHKVQLNVEL KVTGSPNLATLRDPTTKVDFGKQLVAEGLVLAEQRGERKLKELVDQYKAA QEAARVAHLAIWKYGDITQDDAPEFR*