Clone LD20253 Report

Search the DGRC for LD20253

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:202
Well:53
Vector:pBS SK-
Associated Gene/TranscriptCul1-RA
Protein status:LD20253.pep: gold
Preliminary Size:2984
Sequenced Size:3242

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1877 2001-01-01 Release 2 assignment
CG1877 2003-08-12 Blastp of sequenced clone
lin19 2008-04-29 Release 5.5 accounting
lin19 2008-08-15 Release 5.9 accounting
lin19 2008-12-18 5.12 accounting

Clone Sequence Records

LD20253.complete Sequence

3242 bp (3242 high quality bases) assembled on 2003-08-12

GenBank Submission: BT010290

> LD20253.complete
CACCGTCGAGGGCCTTGCAGCGCAATGGCCGAACGGTCACACATTTTAAT
AGTTAGGAATAAACGAAAGTTAGCAATTTTCACAGAAAAAAAAAATTAAT
TTAATTATAAGCAAAGCAGTGAAACACAATTTTAATTTAGTTTTAGTTTT
AATTTTAGCAGCGTCTGGCAACAGATTGACACTTTAAATTCCAAAATTGG
AACACCGATTCGCCAAGATTCCGGCCACAACTCCAAGGACGAGAGCCGCG
AAACGACGCCACCTGGAAAGCAGCAGCAATCCCCTGTCGCCCGCGCAGCA
TTCGCCACCTAGGGTCATTGCCTTCTCCAGCCCAGCGCCACTGCAGGGAC
AGCATCCTCCAGTGGAAGAAGGCAGAAGGCCGTTGCCACAACCCACCGCC
GCCAGAATGAACCGCTCCGGCAATTCCCAGACCACACAGAAACTCGTCAA
CCTGGACGATATCTGGAGCGAATTGGTCGAGGGCATTATGCAGGTGTTTG
AGCACGAGAAGTCCCTCACCCGCAGCCAGTACATGCGTTTCTACACTCAC
GTCTATGACTACTGCACCAGCGTGAGCGCGGCTCCAAGCGGACGGAGCAG
CGGAAAGACAGGCGGAGCGCAGCTGGTGGGCAAGAAGCTGTACGACCGGC
TGGAACAATTTCTCAAGTCATACCTGAGCGAGCTGCTCACCAAGTTCAAG
GCCATCAGCGGCGAGGAGGTACTCCTGTCGCGCTACACCAAACAGTGGAA
GTCGTATCAGTTCTCCAGTACCGTTCTGGACGGCATCTGCAACTACCTGA
ATCGGAACTGGGTGAAGCGCGAGTGCGAGGAGGGGCAGAAGGGTATCTAC
AAGATCTACCGACTGGCCCTCGTCGCCTGGAAGGGACATTTGTTCCAAGT
GCTAAATGAGCCGGTCACCAAGGCAGTGCTCAAGTCCATTGAGGAGGAGC
GTCAAGGCAAGCTCATTAACCGGTCGCTGGTCCGCGACGTTATCGAGTGC
TACGTGGAGCTCAGCTTTAACGAGGAGGATACCGATGCCGAGCAGCAGAA
GTTATCCGTCTACAAGCAAAACTTTGAAAACAAGTTCATCGCAGACACAT
CAGCCTTCTACGAGAAGGAGTCGGACGCCTTTCTGTCCACCAACACGGTC
ACCGAGTATCTGAAGCACGTCGAAAACAGGCTGGAGGAGGAGACGCAGCG
CGTCCGCGGCTTTAATTCAAAGAACGGTCTTTCCTATCTGCACGAGACCA
CAGCGGATGTGCTGAAGTCCACATGCGAAGAGGTTCTTATCGAAAAACAT
CTGAAAATCTTTCACACCGAGTTTCAGAATCTGCTCAACGCAGACCGAAA
CGATGATCTGAAACGGATGTACTCCTTGGTCGCCCTCTCGTCCAAAAACC
TGACAGATCTCAAGTCCATCCTTGAGAACCATATACTCCACCAGGGCACG
GAGGCCATTGCCAAGTGTTGCACTACCGACGCGGCCAACGATCCCAAGAC
GTACGTACAGACCATCCTGGACGTGCACAAGAAGTACAACGCCCTCGTTC
TGACGGCGTTCAACAATGACAACGGATTTGTGGCCGCTTTGGACAAGGCG
TGTGGAAAGTTCATAAACTCGAACGTGGTCACGATCGCAAACAGTGCTAG
CAAGTCGCCCGAATTGCTGGCCAAGTACTGCGATCTGTTATTAAAAAAAT
CCTCGAAAAATCCCGAGGACAAGGAGCTCGAGGACAATCTTAACCAGGTG
ATGGTCGTGTTCAAGTATATCGAGGATAAGGACGTCTTCCAAAAATATTA
CTCCAAGATGCTTGCTAAGCGCTTGGTTAACCACACATCGGCTTCGGATG
ACGCCGAGGCTATGATGATCTCCAAACTGAAGCAGACATGTGGTTACGAA
TACACCGTCAAGCTTCAGAGGATGTTCCAGGACATTGGCGTCTCAAAGGA
CTTGAACTCGTACTTTAAGCAGTACCTGGCCGAAAAGAACTTGACCATGG
AAATAGACTTTGGCATCGAAGTCCTGTCCTCAGGCTCTTGGCCTTTCCAG
CTGAGCAACAACTTCCTGCTACCATCTGAGCTGGAGCGGTCAGTGCGACA
GTTCAATGAGTTCTACGCCGCCCGCCACTCTGGCCGCAAGCTCAACTGGT
TGTATCAGATGTGCAAGGGCGAACTGATAATGAACGTCAACCGCAATAAT
TCCTCCACCTACACCCTGCAGGCCAGCACCTTCCAAATGTCAGTGCTGCT
CCAGTTTAACGATCAGCTCAGTTTTACAGTCCAGCAACTGCAGGACAACA
CACAGACGCAGCAGGAGAACTTGATTCAGGTATTGCAAATACTGCTCAAG
GCGAAGGTGCTGACCTCCAGCGACAATGAGAACTCGCTGACGCCAGAGTC
GACGGTGGAGCTGTTCCTCGATTACAAAAACAAGAAGCGCCGAATTAACA
TCAACCAGCCTTTGAAGACTGAACTTAAAGTGGAGCAGGAGACTGTACAT
AAGCACATAGAGGAGGACCGAAAATTACTGATCCAGGCGGCGATCGTCCG
CATCATGAAGATGCGCAAACGACTCAACCACACCAATCTCATATCGGAGG
TGCTTAATCAGCTGTCAACGCGCTTTAAGCCTAAGGTGCCCGTGATCAAG
AAGTGCATAGACATCCTGATCGAGAAGGAGTATCTAGAGCGAATGGAGGG
ACACAAAGACACATATAGTTATCTCGCCTAAGTTTTTGTTAAATGAACAA
CTTTCGCTGTTTCATCTATGCCAGCCATTAAAAATATCATCAATAAACTT
AGATTCGTGTCGACCCTCCGCTACCCTTCCTCCTAGCCCGAAATAAACTG
CCGCCGAAACATTCGAACTAGAAGCGAGCTAAAAATACTCCATGCTTCGC
ATAAAATGTGCAATTCTCGCCAACGCGTCACTAACTCCATCTTCCGACAC
CCAGCACCTCATTCAAAGAAAAGGCCAGTCGCAGGGATCAAGTGAACCTA
TTGACCAGATCACAGCCGATGAATCCGGCCTCTGTAGGAACATATTCCAA
TTGCCGAGGACAAGGTTCCAGGTTCCCAGCCTACAAATAGACTTCTGCAG
GGGCTGTACGGTATACATATGTAGCGATTTTCTTTACTTCCCATTGTTCG
ATCAATATTTGTTTTAACTAGATTATGTTTATTCATAATTCGCTGTATGC
ATATACAATTATTATAATTCTACGAAAAAAAAAAAAAAAAAA

LD20253.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:11:12
Subject Length Description Subject Range Query Range Score Percent Strand
lin19-RB 4006 lin19-RB 27..3260 1..3234 16140 99.9 Plus
lin19-RC 3304 lin19-RC 148..3235 147..3234 15410 99.9 Plus
lin19-RA 3286 lin19-RA 157..3217 174..3234 15275 99.9 Plus
lin19-RC 3304 lin19-RC 80..147 1..68 340 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:31:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 3805103..3806215 172..1284 5535 99.8 Plus
chr2R 21145070 chr2R 3806273..3807323 1281..2331 5240 99.9 Plus
chr2R 21145070 chr2R 3807380..3808279 2325..3224 4485 99.9 Plus
chr2R 21145070 chr2R 3804309..3804482 1..174 870 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:07:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:31:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7917729..7918841 172..1284 5565 100 Plus
2R 25286936 2R 7918899..7919949 1281..2331 5255 100 Plus
2R 25286936 2R 7919999..7920908 2325..3234 4520 99.8 Plus
2R 25286936 2R 7916935..7917108 1..174 870 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:41:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 7918928..7920040 172..1284 5565 100 Plus
2R 25260384 2R 7920098..7921148 1281..2331 5255 100 Plus
2R 25260384 2R 7921198..7922107 2325..3234 4520 99.7 Plus
2R 25260384 2R 7918134..7918307 1..174 870 100 Plus
Blast to na_te.dros performed on 2019-03-16 04:31:00 has no hits.

LD20253.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:31:55 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 3804309..3804482 1..174 100 -> Plus
chr2R 3805106..3806213 175..1282 99 -> Plus
chr2R 3806275..3807321 1283..2329 99 -> Plus
chr2R 3807385..3808279 2330..3224 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:54:36 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
lin19-RA 1..2325 407..2731 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:56:00 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
lin19-RA 1..2325 407..2731 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:32:03 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
lin19-RB 1..2325 407..2731 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:49:20 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
lin19-RA 1..2325 407..2731 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:41:51 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
Cul1-RB 1..2325 407..2731 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:35:23 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
lin19-RB 1..3224 1..3224 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:56:00 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
lin19-RB 1..3224 1..3224 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:32:03 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
lin19-RB 1..3205 20..3224 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:49:20 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
lin19-RB 1..3224 1..3224 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:41:51 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
Cul1-RB 1..3205 20..3224 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:31:55 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7916935..7917108 1..174 100 -> Plus
2R 7917732..7918839 175..1282 100 -> Plus
2R 7918901..7919947 1283..2329 100 -> Plus
2R 7920004..7920898 2330..3224 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:31:55 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7916935..7917108 1..174 100 -> Plus
2R 7917732..7918839 175..1282 100 -> Plus
2R 7918901..7919947 1283..2329 100 -> Plus
2R 7920004..7920898 2330..3224 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:31:55 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7916935..7917108 1..174 100 -> Plus
2R 7917732..7918839 175..1282 100 -> Plus
2R 7918901..7919947 1283..2329 100 -> Plus
2R 7920004..7920898 2330..3224 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:32:03 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3804440..3804613 1..174 100 -> Plus
arm_2R 3805237..3806344 175..1282 100 -> Plus
arm_2R 3806406..3807452 1283..2329 100 -> Plus
arm_2R 3807509..3808403 2330..3224 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:21:11 Download gff for LD20253.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7918931..7920038 175..1282 100 -> Plus
2R 7920100..7921146 1283..2329 100 -> Plus
2R 7921203..7922097 2330..3224 100   Plus
2R 7918134..7918307 1..174 100 -> Plus

LD20253.pep Sequence

Translation from 406 to 2730

> LD20253.pep
MNRSGNSQTTQKLVNLDDIWSELVEGIMQVFEHEKSLTRSQYMRFYTHVY
DYCTSVSAAPSGRSSGKTGGAQLVGKKLYDRLEQFLKSYLSELLTKFKAI
SGEEVLLSRYTKQWKSYQFSSTVLDGICNYLNRNWVKRECEEGQKGIYKI
YRLALVAWKGHLFQVLNEPVTKAVLKSIEEERQGKLINRSLVRDVIECYV
ELSFNEEDTDAEQQKLSVYKQNFENKFIADTSAFYEKESDAFLSTNTVTE
YLKHVENRLEEETQRVRGFNSKNGLSYLHETTADVLKSTCEEVLIEKHLK
IFHTEFQNLLNADRNDDLKRMYSLVALSSKNLTDLKSILENHILHQGTEA
IAKCCTTDAANDPKTYVQTILDVHKKYNALVLTAFNNDNGFVAALDKACG
KFINSNVVTIANSASKSPELLAKYCDLLLKKSSKNPEDKELEDNLNQVMV
VFKYIEDKDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYT
VKLQRMFQDIGVSKDLNSYFKQYLAEKNLTMEIDFGIEVLSSGSWPFQLS
NNFLLPSELERSVRQFNEFYAARHSGRKLNWLYQMCKGELIMNVNRNNSS
TYTLQASTFQMSVLLQFNDQLSFTVQQLQDNTQTQQENLIQVLQILLKAK
VLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTELKVEQETVHKH
IEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKVPVIKKC
IDILIEKEYLERMEGHKDTYSYLA*

LD20253.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:19:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13641-PA 775 GF13641-PA 1..775 1..774 3887 93.8 Plus
Dana\GF15487-PA 748 GF15487-PA 6..748 12..774 1067 33.9 Plus
Dana\GF11213-PA 821 GF11213-PA 160..821 77..774 810 31.5 Plus
Dana\GF14531-PA 874 GF14531-PA 169..874 75..774 787 30.1 Plus
Dana\GF18726-PA 840 GF18726-PA 201..840 150..774 665 30.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:19:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23311-PA 858 GG23311-PA 85..858 1..774 4082 98.3 Plus
Dere\GG21342-PA 753 GG21342-PA 6..753 12..774 1066 33.5 Plus
Dere\GG10678-PA 821 GG10678-PA 160..821 77..774 801 31.5 Plus
Dere\GG24216-PA 1027 GG24216-PA 322..1027 75..774 779 30 Plus
Dere\GG12041-PA 852 GG12041-PA 213..852 150..774 668 30.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:19:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21298-PA 773 GH21298-PA 1..773 1..774 3699 89.3 Plus
Dgri\GH10784-PA 756 GH10784-PA 6..756 12..774 1015 32.4 Plus
Dgri\GH19988-PA 826 GH19988-PA 165..826 77..774 797 31.5 Plus
Dgri\GH13125-PA 990 GH13125-PA 232..990 3..774 789 28.8 Plus
Dgri\GH18911-PA 858 GH18911-PA 219..858 150..774 665 30.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:31:51
Subject Length Description Subject Range Query Range Score Percent Strand
Cul1-PD 774 CG1877-PD 1..774 1..774 3960 100 Plus
Cul1-PA 774 CG1877-PA 1..774 1..774 3960 100 Plus
Cul1-PB 774 CG1877-PB 1..774 1..774 3960 100 Plus
Cul1-PC 774 CG1877-PC 1..774 1..774 3960 100 Plus
Cul2-PB 753 CG1512-PB 6..753 12..774 1071 33.1 Plus
Cul2-PA 753 CG1512-PA 6..753 12..774 1071 33.1 Plus
Cul4-PB 821 CG8711-PB 160..821 77..774 826 31.4 Plus
Cul4-PA 821 CG8711-PA 160..821 77..774 826 31.4 Plus
Cul3-PF 934 CG42615-PF 178..934 3..774 815 28.6 Plus
Cul3-PE 773 CG11861-PB 68..773 75..774 812 29.9 Plus
Cul3-PC 773 CG11861-PA 68..773 75..774 812 29.9 Plus
Cul3-PD 773 CG11861-PC 68..773 75..774 812 29.9 Plus
Cul5-PA 852 CG1401-PA 213..852 150..774 688 30.7 Plus
CG11261-PA 670 CG11261-PA 5..670 11..773 501 25.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:19:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19786-PA 827 GI19786-PA 55..827 1..774 3632 87 Plus
Dmoj\GI17442-PA 757 GI17442-PA 6..757 12..774 1055 33.5 Plus
Dmoj\GI20275-PA 822 GI20275-PA 165..822 77..774 808 31.9 Plus
Dmoj\GI22726-PA 1023 GI22726-PA 267..1023 3..774 786 28.7 Plus
Dmoj\GI23410-PA 834 GI23410-PA 195..834 150..774 662 30.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:19:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11695-PA 774 GL11695-PA 1..774 1..774 3833 92.5 Plus
Dper\GL25796-PA 756 GL25796-PA 6..756 12..774 1025 32.6 Plus
Dper\GL17383-PA 816 GL17383-PA 155..816 77..774 780 31.2 Plus
Dper\GL26600-PA 1008 GL26600-PA 303..1008 75..774 779 30 Plus
Dper\GL23281-PA 846 GL23281-PA 207..846 150..774 668 30.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15074-PB 774 GA15074-PB 1..774 1..774 3837 92.6 Plus
Dpse\GA13508-PA 756 GA13508-PA 6..756 12..774 1025 32.6 Plus
Dpse\GA21273-PA 816 GA21273-PA 155..816 77..774 780 31.2 Plus
Dpse\GA16511-PA 1008 GA16511-PA 303..1008 75..774 780 30 Plus
Dpse\GA12695-PA 848 GA12695-PA 209..848 150..774 664 30.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20989-PA 774 GM20989-PA 1..774 1..774 4106 99.1 Plus
Dsec\GM16141-PA 753 GM16141-PA 6..753 12..774 1067 33.5 Plus
Dsec\GM14478-PA 1028 GM14478-PA 323..1028 75..774 782 30.2 Plus
Dsec\GM20725-PA 698 GM20725-PA 158..629 77..581 589 30.8 Plus
Dsec\GM12268-PA 766 GM12268-PA 213..687 150..623 574 31.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10516-PA 774 GD10516-PA 1..774 1..774 4106 99.1 Plus
Dsim\GD24329-PA 753 GD24329-PA 6..753 12..774 1063 33.5 Plus
Dsim\GD21965-PA 1003 GD21965-PA 361..1003 144..774 754 31.1 Plus
Dsim\GD12683-PA 660 GD12683-PA 192..660 277..773 393 28.4 Plus
Dsim\GD12683-PA 660 GD12683-PA 11..238 13..251 226 29.2 Plus
Dsim\GD17999-PA 387 GD17999-PA 213..374 150..325 181 29.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:19:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17750-PA 773 GJ17750-PA 1..773 1..774 3645 88 Plus
Dvir\GJ14230-PA 756 GJ14230-PA 6..756 12..774 1024 32.5 Plus
Dvir\GJ20228-PA 821 GJ20228-PA 164..821 77..774 798 31.6 Plus
Dvir\GJ23288-PA 985 GJ23288-PA 229..985 3..774 787 28.6 Plus
Dvir\GJ10616-PA 836 GJ10616-PA 197..836 150..774 668 30.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:19:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21971-PA 775 GK21971-PA 1..775 1..774 3850 92.9 Plus
Dwil\GK23161-PA 821 GK23161-PA 160..821 77..774 810 31.5 Plus
Dwil\GK18258-PA 775 GK18258-PA 68..775 75..774 783 29.8 Plus
Dwil\GK22602-PA 840 GK22602-PA 201..840 150..774 654 30.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:19:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19156-PA 774 GE19156-PA 1..774 1..774 4069 98.3 Plus
Dyak\GE12924-PA 753 GE12924-PA 6..753 12..774 1065 33.4 Plus
Dyak\GE23323-PA 821 GE23323-PA 160..821 77..774 806 31.6 Plus
Dyak\GE19410-PA 1027 GE19410-PA 322..1027 75..774 780 30 Plus
Dyak\GE10480-PA 852 GE10480-PA 213..852 150..774 670 30.8 Plus

LD20253.hyp Sequence

Translation from 406 to 2730

> LD20253.hyp
MNRSGNSQTTQKLVNLDDIWSELVEGIMQVFEHEKSLTRSQYMRFYTHVY
DYCTSVSAAPSGRSSGKTGGAQLVGKKLYDRLEQFLKSYLSELLTKFKAI
SGEEVLLSRYTKQWKSYQFSSTVLDGICNYLNRNWVKRECEEGQKGIYKI
YRLALVAWKGHLFQVLNEPVTKAVLKSIEEERQGKLINRSLVRDVIECYV
ELSFNEEDTDAEQQKLSVYKQNFENKFIADTSAFYEKESDAFLSTNTVTE
YLKHVENRLEEETQRVRGFNSKNGLSYLHETTADVLKSTCEEVLIEKHLK
IFHTEFQNLLNADRNDDLKRMYSLVALSSKNLTDLKSILENHILHQGTEA
IAKCCTTDAANDPKTYVQTILDVHKKYNALVLTAFNNDNGFVAALDKACG
KFINSNVVTIANSASKSPELLAKYCDLLLKKSSKNPEDKELEDNLNQVMV
VFKYIEDKDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYT
VKLQRMFQDIGVSKDLNSYFKQYLAEKNLTMEIDFGIEVLSSGSWPFQLS
NNFLLPSELERSVRQFNEFYAARHSGRKLNWLYQMCKGELIMNVNRNNSS
TYTLQASTFQMSVLLQFNDQLSFTVQQLQDNTQTQQENLIQVLQILLKAK
VLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTELKVEQETVHKH
IEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKVPVIKKC
IDILIEKEYLERMEGHKDTYSYLA*

LD20253.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:22:20
Subject Length Description Subject Range Query Range Score Percent Strand
Cul1-PD 774 CG1877-PD 1..774 1..774 3960 100 Plus
Cul1-PA 774 CG1877-PA 1..774 1..774 3960 100 Plus
Cul1-PB 774 CG1877-PB 1..774 1..774 3960 100 Plus
Cul1-PC 774 CG1877-PC 1..774 1..774 3960 100 Plus
Cul2-PB 753 CG1512-PB 6..753 12..774 1071 33.1 Plus